Pful021301.1
Basic Information
- Insect
- Parascotia fuliginaria
- Gene Symbol
- Zfy1
- Assembly
- GCA_963082885.1
- Location
- OY720188.1:16248078-16252469[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.57 62 5.4 1.8 2 23 248 269 247 269 0.95 2 19 3.6 3.9e+02 2.8 0.1 6 23 281 299 281 299 0.93 3 19 0.068 7.3 8.3 0.8 2 23 310 332 309 332 0.95 4 19 8e-07 8.6e-05 23.8 1.1 2 23 355 376 355 376 0.97 5 19 0.00049 0.053 15.0 5.6 1 23 383 406 383 406 0.95 6 19 0.16 18 7.1 0.4 1 13 412 424 412 428 0.91 7 19 0.087 9.4 7.9 2.1 1 23 557 579 557 579 0.96 8 19 0.00046 0.05 15.1 2.0 2 23 586 608 585 608 0.92 9 19 6.5e-07 7e-05 24.1 0.8 1 23 614 636 614 636 0.99 10 19 6.1e-07 6.6e-05 24.1 2.6 1 23 642 664 642 664 0.98 11 19 0.00039 0.042 15.3 1.1 1 23 670 692 670 692 0.98 12 19 0.024 2.6 9.7 3.8 1 23 698 720 698 720 0.96 13 19 7e-05 0.0076 17.7 1.1 1 23 726 749 726 749 0.96 14 19 0.084 9.1 8.0 0.3 3 23 806 825 806 825 0.97 15 19 1.3e-06 0.00014 23.1 0.2 1 23 831 854 831 854 0.98 16 19 7.9e-07 8.5e-05 23.8 1.3 1 23 860 882 860 882 0.98 17 19 0.00014 0.015 16.8 0.1 1 23 888 910 888 910 0.99 18 19 0.00035 0.038 15.5 0.1 2 23 916 937 915 937 0.96 19 19 0.026 2.8 9.6 1.9 6 23 947 964 945 964 0.96
Sequence Information
- Coding Sequence
- atgaataatgaaaCACAGCAACTGTTTTCACTAAATCCGGGAGTAGTTCAGCCATCGATCTCAATACAAAGACTGCTTGAAATACCTAACACTGCACCAATAAATTTACAAGATGTTGAAGACTTCTCGAATGTGTGCCGGGCATGCGCCACCATCACAGAGTTTATCATCCCTATATTCTCTGGAGAAGGGCTACAGTACAACCTGGCggagaaaataaacaaacacatgCCTATACAGGTTTCAGAAACAGATCCCTTACCACATGTGTTCTGCTACCAGTGTGCCAGCCAGTTACTGGCCTGGCATGAGCGGGTGCTGTGCTGTGTGCAGGCAGATGCAGCTCTTAGAGCAAGAATAGCTGCAGACAGCAATGGAGTTAATAATAAGGATACAAAGCCAACAAATTTTAGAACAAATACTAACATCCAAGAGGACTCACAAAGCCAGTTTTACACCAATGTCAAAAAAATTCTGATCAATTACTTTAATGACTTGGAGATCAAAGACACATTAGTCTTGGAGTTTGTTTGTCAAAAGTGCACTGAGAAACCTGCACTGACCACCATGGAAAGTTTAacacaacatttaaaatatgatcACACATCCGAGGTCAATGATGAGAATGATATCAaactgtttattaaaaattatattacctTTGAAGAAATACTACATTCTGAAGACTCAGACCGAGACAATTATTCAGAAACCATGGCAGAAAAATTACTCCCTAATCTTTACTGCCCATTCTGTACCAACGTGTTTTCTTCACCGACACGATTAGTGTGCCACCTTAACAAACACTTCGAGGTGTGCATCGAGGACGGTATTATGTGCTGCAACACCATTTATAACAATAAGAAAAGCTTTGTGGAACATTTACAAGATGCCCATGTTGATGTTGATGtagatattatgttaaaaacgTGTAAAACTTGCGGCTTCACTACCGAAGACAACAATGTACTACACGCGCATATAATTAGTGAACATCAAAAGAAGAAAACCATTAAAGGCAAGAAATTACAGAGTCCGAAAAATCAAAAGTACATTCCAGCTGTGTGCCCCGAGTGTAACAGGACATTCTCTAATAAGTACAATATGTTTGTGCACATGAAGAGCCACCGCGAACCAGCCACCAAGCATTGTTGcgataaatgtaaaaaaatctaCAAGAGTCGATCGAGTTTAACTAATCATATCAAATTAGTCCACGAAGGAATATTAAACTTCGTGTGTTCCGAGTGTGGCGAGGCGTTCCCTACGCGAAAAAGAAGACACATCTCGACTACCACATTAAAACTCACTACAAGTAAAGAACCGAGAGTAAACGAGGTTGTTTGTTGCAGGGACGACCCACACGTACTGGACGACTCGGACCAGTCGGACGATAAACCGCTCTCAGTCATAGCAGATCAAAAATCCAATAATTTATACACAAATTTTTACAAAGCATTACTCAATTTTAGAAACCATTTCGTCAATGAACACAATACCGAAGAATCTTATCCAGATTTCACTGACTCCAGTGTATCGGAAGTAGAAGAGGGTAACATAGACAGCTTTGACGACTTAACACAGTGTAATATGAGGAAAGGTAAAATGGATGACGAAACCAGGCTCGAACTAAGTCAAGTGCAAACTAAAATCAACGGCAAAGTTTTCTATACTTGTGGGGTGTGTGGAAAGAACTTGAGTTCGTCGCACACGTACGTGTTCCACAAGAGGATCCACACCGGGGAGCGACCCTGCGTCTGCCACGTCTGCGGGAAGCAGTTCCGAGCGCCCAACGGACTGCAGCGACACCTCACGGAAACGCACGAACGATTGCGAAGATATACCTGCAGTTTGTGTCCCAAGAATTTTGCTAACTCACAGAATTTGAAACAGCATTTACGAATACATACAGGAGAAAGACCATTCGTGTGCTCGCACTGTGGTAAGAGATTCACTCAGAGCGGGTCATTGTACGTTCATTTAAAGACTCACAGTGAGCTGTTCCCGTACCACTGCGCGGAGTGCGGCGCCAAGTTCCGCCTGCGCTCGGGGCTGGCGCGGCACCGCCTCAAGCACTCCGGGGAGCGACCGCACGTGTGCGCGCACTGCGGGAAGGGCTTCTGGCAACGACACGAACTGAACTCACACAGCTTATCTCACTCCGACAGTAAACCTTTCGCGTGCACATCTTGCGGAGCCGCGTTCCGCCAGAGAAGAGCTCTCAGACATCACATAAAAAGGATCCACGAAAACGACCTGGCGCCAAGAGAGATGCCCAATCATACCGACATAGTAGTGTATTTGGAGGTTAAAGTCGAAGAGCGCGCCGTCGAGGACAGTAGTATACCACACCCACCGGGGTGCGTGGCACCGCCCAAGACGTCGCCGGCGGCGGGCGGGCGCCGCACCGCGTGGTGCGAGGAGTGCAACAAGAGCGTGTCGCAGGTGTCGTGGCGCCGCCACGCGCGCCTGCACCTGGGGGAGAAGCGCTACAGCTGCCACGCGTGCGGCCGAGCGTTCGCCGACAGCGGGAACCTGGCGAGGCACGTGCGCACCCTGCACGCTCGGGAGCGCCCGTTCGAGTGTCCCACGTGTGGCAAGACGTTTTCTAGAAGAGCGCACTTGGACGATCACGTAAAGTCGCACTCGGAGCGGAGAGAATACGTGTGCTCGGTGTGCGGGAAGGGGTCCAAGTCGGGCGCCGCGCTGCGCATGCACCTGCGCACGCACGCGGCGCGCACGCTGTCGTGCGTGCAGTGCGGCGCGCTGTTCCGGCGCCGCGCCGAGCTGCGCGCGCACGTGCGCGTGCACACCGGCGAGCGCGCGCACGCGTGCCGCTGCGGCCGCGCCTTCCGCCTGCGCGCCCAGCTGCGCGCGCACCACGCCACGCACCCCAGCTGCCTGCTGGCCAGCCAGTCACGACTCCGGGCCGACGATGTACCTATACCTTAA
- Protein Sequence
- MNNETQQLFSLNPGVVQPSISIQRLLEIPNTAPINLQDVEDFSNVCRACATITEFIIPIFSGEGLQYNLAEKINKHMPIQVSETDPLPHVFCYQCASQLLAWHERVLCCVQADAALRARIAADSNGVNNKDTKPTNFRTNTNIQEDSQSQFYTNVKKILINYFNDLEIKDTLVLEFVCQKCTEKPALTTMESLTQHLKYDHTSEVNDENDIKLFIKNYITFEEILHSEDSDRDNYSETMAEKLLPNLYCPFCTNVFSSPTRLVCHLNKHFEVCIEDGIMCCNTIYNNKKSFVEHLQDAHVDVDVDIMLKTCKTCGFTTEDNNVLHAHIISEHQKKKTIKGKKLQSPKNQKYIPAVCPECNRTFSNKYNMFVHMKSHREPATKHCCDKCKKIYKSRSSLTNHIKLVHEGILNFVCSECGEAFPTRKRRHISTTTLKLTTSKEPRVNEVVCCRDDPHVLDDSDQSDDKPLSVIADQKSNNLYTNFYKALLNFRNHFVNEHNTEESYPDFTDSSVSEVEEGNIDSFDDLTQCNMRKGKMDDETRLELSQVQTKINGKVFYTCGVCGKNLSSSHTYVFHKRIHTGERPCVCHVCGKQFRAPNGLQRHLTETHERLRRYTCSLCPKNFANSQNLKQHLRIHTGERPFVCSHCGKRFTQSGSLYVHLKTHSELFPYHCAECGAKFRLRSGLARHRLKHSGERPHVCAHCGKGFWQRHELNSHSLSHSDSKPFACTSCGAAFRQRRALRHHIKRIHENDLAPREMPNHTDIVVYLEVKVEERAVEDSSIPHPPGCVAPPKTSPAAGGRRTAWCEECNKSVSQVSWRRHARLHLGEKRYSCHACGRAFADSGNLARHVRTLHARERPFECPTCGKTFSRRAHLDDHVKSHSERREYVCSVCGKGSKSGAALRMHLRTHAARTLSCVQCGALFRRRAELRAHVRVHTGERAHACRCGRAFRLRAQLRAHHATHPSCLLASQSRLRADDVPIP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -