Basic Information

Gene Symbol
SMARCC2
Assembly
GCA_963082885.1
Location
OY720192.1:8001951-8017756[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.6e-15 9.9e-12 45.8 0.1 3 44 528 569 526 571 0.95

Sequence Information

Coding Sequence
ATGAAAGTGTTTATGGACATGAAACCGGGCGGTTCCCTGTGCACGGTGCTTGCTACCATGTTCCGTTTCAAGTCGGAGCAGCGGTGGCGCAAGTTCGACTTCCAGGTCGGTAAGAACCCGTCGCGCAAAGACCTAAACGTGCAGATGATGATGGAGATCGAGTCGTCTTTACTCGGTGCTGAGATCATCCGCACTCCCTGCGTGTACATACGGCCCGACGTTGACAAGACGACCGCTAACAAAGTCaaagatattattgttaatCATCAAGGCGAGATTTGCGAAGATGAAGATGACGCGACCCACATAATATACCCTACGGTGGATCCTTTAGAAGAGGAGTACGCTCGGCCAGTGTTCCGTAAAAACAACCACGTGCTCGTTCATTGGTATTATCTACCCGACAGTCATGATACCTGGGCACAGGCTGATCTACCCGTGGACGTATCAGAATCAGTAAACTGGGACTGCAATCGTTCCGAAGCGTGGCGCGTGTCCGCGTCATGGGCGCTAGATCTGCCGCAGTACAACGAGTGGATGAACGAGGAGGACTATGAAGTTGATGCTAATGGGAAAAAGAAGacCCACAAGTTACGTCTGTCGGTGGATGACTTGATCCCTGGCGCGGAACCTTCTAGCAAGTCGAAGAAAGGCAGCAAGAGAAAACGTTCACCATCGCCACCTCCTCTGAAACATGGCAAGAGAAAGAGcCGTTCAACAAAGCGACGGGACAACGACGTGGATGAGGAAGAAGATAATGCCTCTCGGGATAACACCGATGCTGCGCCTACGCCCGAGAACGAAAGATCTACTGAACCGACTACTGCCGCTAGTACCACAGCTGAAGCTCCGGCTGCAAGCGAAGCGCCCGCAACACCAGCGCCACCACTTGATACCCATGATGATTCGCAGGGCAAGCATAGCGATTCTAACACACAGGAAATGCTCACTAAGGAGGAACTAGAAGATAACGTAACAGATCAAACGCATCATATAGTAGTGCCGTCGTACTCGGCGTGGTTTGACTACAATTCTATACACACTATAGAGAAGCGCGCCCTACCAGAGTTCTTTAACGGCAAGAACAAGTCCAAGACTCCTGAGATATATCTCGCTTACAGAAACTTCATGATCGACACGTACCGTTTGAACCCTACGGAGTACTTAACAAGTACGGCGTCTAGACGCAACTTGGCGGGAGACGTCTGCGCTATCATGAGAGTGCATGGCTTTCTGGAACAGTGGGGACTTATCAACTATCAGTTGGAGGCTGAATCTCGTCCGACCGCTATGGGTCCCCCGCCGACGTCTCACTTCCACGTGCTATCCGACACGCCGTCTGGATTGCAACCGCTAGTCACCAGACCTACACAGCCGAGGCCTGCGGAGAACGTACCAAAAGTGGAGCCGGGTCTACCAAACGGAGCGGAGGCGGGCGCGGGGGCCGTGCCGCCCGCTGCGGCGCCCAGCAAGGCCGAGCCTGCGCTGGACATCATAGCGGCTCCCGGGCTTAAACTTGATCAGTACCGCGTGGGCGTGGGCgccgcgggcggcgcggcgggcggcgcggcgcgcgcgcgcgcgtggACGGAGCAGGAGACGCTGCTGCTGCTGGAGGCGCTGGAGCTGCACCGCGACGACTGGAACCGCGTCGCCGCGCACGTGGGCTCGCGCACGCAGGACGAGTGCATCCTGCACTTCCTGCGCCTGCCCATCGAGGAGCCCTACCTGCACGACCCCGCCGCAGGTGGAGTCCTCGGGCCCTTAGCTTACCAGCCGATACCGTTCAGCAAGACGGGCAATCCGGTGATGAGCACCGTGGCGTTCCTCGCTTCGGTCGTCGACCCGCGCATCGCCTCAAAGGCGACGAGAGCTGCCATGGAAGAATTTGCTGCTATCAAGGACGAGGTGCCGGCCGCCATGATGGAGGCGCACGTGAAGGCGGCGAGCGCGCACGGGCCCGCCGCCGCGCTCGCCGCCACCGGCATCGCCGGCACCGCGCCGGAGGCTCCCACTGAAACCAAAAAGGAGGGTTCTTCGGATATAAAAGCCGAGCCAATGGAAGTAGAGGAAGGTGAAGCTAAAGTAAAAGAAGAGCCAGCAGAGACGCCCGCTCCTGCTGAAGCTGACAAGGAACCTAAAGACGAACCGTCATCGCAACCTGGAAAGGAACAACCAGAGAAAACTGAAGCCCCTACTACCGTAGACGCTAAACTGCAATCAGCCGCTGCCGCAGCATTAGCCGCAGCCGCCGTCAAAGCGAAGCATCTAGCTGGAGTCGAGGAAAGAAAGATTAAGTCTCTCGTCGCTTTACTAGTGGAGACACAGATGAAGAAATTAGAGATCAAGCTGCGACACTTCGAGGAGTTGGAGGCCACTATGGAGAGGGAGCGAGAAGgTTTGGAGTACCAGAGGCAGCAGTTGATACAAGAGCGACAACAATTCCACTTGGAACAACTGAAGGCAGCCGAATTCCGCGCTAGACATCAAGCGCATCAAAGGTTACAAGCAGAGAGCGGTGCCGCGGGCGTGGGTCCCGTGGCGAGCGGGGTCCCGCTGGCGGCAGGCCCCGCGCCGGGCCCCGCGAGCGCCGCGCCGCCCACTGACGCGGTGGCCGAGCCTGCGCCGCCGCCGCACGCCTAG
Protein Sequence
MKVFMDMKPGGSLCTVLATMFRFKSEQRWRKFDFQVGKNPSRKDLNVQMMMEIESSLLGAEIIRTPCVYIRPDVDKTTANKVKDIIVNHQGEICEDEDDATHIIYPTVDPLEEEYARPVFRKNNHVLVHWYYLPDSHDTWAQADLPVDVSESVNWDCNRSEAWRVSASWALDLPQYNEWMNEEDYEVDANGKKKTHKLRLSVDDLIPGAEPSSKSKKGSKRKRSPSPPPLKHGKRKSRSTKRRDNDVDEEEDNASRDNTDAAPTPENERSTEPTTAASTTAEAPAASEAPATPAPPLDTHDDSQGKHSDSNTQEMLTKEELEDNVTDQTHHIVVPSYSAWFDYNSIHTIEKRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTASRRNLAGDVCAIMRVHGFLEQWGLINYQLEAESRPTAMGPPPTSHFHVLSDTPSGLQPLVTRPTQPRPAENVPKVEPGLPNGAEAGAGAVPPAAAPSKAEPALDIIAAPGLKLDQYRVGVGAAGGAAGGAARARAWTEQETLLLLEALELHRDDWNRVAAHVGSRTQDECILHFLRLPIEEPYLHDPAAGGVLGPLAYQPIPFSKTGNPVMSTVAFLASVVDPRIASKATRAAMEEFAAIKDEVPAAMMEAHVKAASAHGPAAALAATGIAGTAPEAPTETKKEGSSDIKAEPMEVEEGEAKVKEEPAETPAPAEADKEPKDEPSSQPGKEQPEKTEAPTTVDAKLQSAAAAALAAAAVKAKHLAGVEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARHQAHQRLQAESGAAGVGPVASGVPLAAGPAPGPASAAPPTDAVAEPAPPPHA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00040769;
90% Identity
-
80% Identity
-