Pful029833.1
Basic Information
- Insect
- Parascotia fuliginaria
- Gene Symbol
- -
- Assembly
- GCA_963082885.1
- Location
- OY720196.1:6230188-6232062[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.8e-09 2.7e-06 28.0 0.0 1 41 15 55 15 58 0.93
Sequence Information
- Coding Sequence
- ATGCCGCGTAATTATATGCGTACGACTGATCGCCAATCCTGGAGTGAGGAATCAATGCGGAAAGCTATTGAAGCGGTTCGGAATAATGAAATGGGCTGGTTATTGGCATCTAAAACTTTTGGTGTTCCACAAGCAACACTCCGAAGGCATGCTTCAGGTAGTAACAAAACTTTGATGTCCAGTTCGAAGGGTCTTGGAAGTTGGAAATCTACTTTTACACCTGATGTGGAAAGGCAATTAGTTCAGCATTTGAAATTACTTGAATCCCGTTTGTTTGGATTGACGCGAACATCGGTTCAAGAATTAGCTTTTCAGGTGGCAGAAAAAAATGGCTTCTCACATAGATTTAACCCACAGAAACAAAAAGCTGGACAAGAATGGTTGGCAGGATTTCTCAAACGAAATAAAGATATTTCTTTACGCAAACCGGAAGCTACTTCAGCTGCTCGTGCTCAGGCTTTTAATCGGCCTCAAGTCCAAAAGTTTTTTGAACTATTTGGAAATCTGCTGGAATCTGTAAACTTTAGCCCACATCGCATTTATAATGCTGATGAGTCAGGCCTATCTACAGTACAAAAACCCCAGAAGATATTGGCTACTACTGGAAGGAAGCAAGTTGGCGTTATAACTAGTGCAGAACGTGGAACAAACATTACTGTTGTTTGTTGTGTAAATGCCATTGGTACGTTCATCCCGCCAATGATGATATTTCCGAGGAAGAATATGAAGAATGAGCTGGTCGACGACGCTCCTTCTGGTACTTTAGGTGTAGCTCAACAGTCTGGGTGGATGACAACAGATATATTTCTGAAATGGATGAaacattttcaaagttttgCTAAGTCGTCTATTGACGATAAGGTAATTTTGATTGTCGACGGACATGCAAGTCATAAAGGAATTGACACTTTAGAATATGCTAAACAAAacggtattattataatttgtctaCCCCCACATTGCACACATCGCATGCAGCCCTTGGATGTTTCATTTTTCGCACCCTTGAAAACTTACTTTAGCCAAGAAATATCCAAGTGGCTAAAAGCACATCCTGGACGTGTTGTAACACAATTCCAGATAGCCGGGCTGCTCAATGAAGCTTATGGCAAGGCAGCTACAGTGCAAAATATTTGTCATGGATTTAAAAGCACTGGCATTTGGCCTCTAAATCCAGACATATTTCCTGATTATATGTACGAGCCTGCAGAGACCACGAATATACCGCTGGAAGATACTTCTAGAGAGCAACGTCATGACCAGACTCTTGATTTAGTTACCATAGCTGGGCCCTCTACACAACAGCAAGACGATACATCTTTGCTCCCTGGATCGAACGTTCCCCAGGTTGCTGCAATCACACCTAACGACAATAATACTGCAGAAATAACAGTTACCGAACAACAAGTCGATACATCCCAGACTCTATCAACAGAATCTGCTGCTTATAAAGAACACCCAACGTTCTATACTCTTACTGTCCCTATAGCGGAGATTTCTCCAGTCCCAAAAGGACGTTTTATAAGTGGGCAAGGGAAACGCAAGCCCAAGAATCGACAAACCTCTGTAGTTTTGACATCGACTCCTAATATGGAGGTAATTAAATCGAAAAATGAGCCCAAAGCTCCTCCGGAGAAAAGAAGACGGAACGTCACTAAAACGTTATTTGAAGAAGATAGTGATGAAGAAAACTTTCCTAATAACTATCAAGATGATGAAGAGGATTGTGCATGCATATATTGCAATGATCTTTTCTCACGATCTAAGCCTGGAGAAGACTGGCTACGATGCTTAAATTGTTTACGGTGGGCTCACGCTTCTTGCGCTGATGTTCCTAAGCGAACTAAGCGTTTCATTTGTGAACTTTGTCATTAA
- Protein Sequence
- MPRNYMRTTDRQSWSEESMRKAIEAVRNNEMGWLLASKTFGVPQATLRRHASGSNKTLMSSSKGLGSWKSTFTPDVERQLVQHLKLLESRLFGLTRTSVQELAFQVAEKNGFSHRFNPQKQKAGQEWLAGFLKRNKDISLRKPEATSAARAQAFNRPQVQKFFELFGNLLESVNFSPHRIYNADESGLSTVQKPQKILATTGRKQVGVITSAERGTNITVVCCVNAIGTFIPPMMIFPRKNMKNELVDDAPSGTLGVAQQSGWMTTDIFLKWMKHFQSFAKSSIDDKVILIVDGHASHKGIDTLEYAKQNGIIIICLPPHCTHRMQPLDVSFFAPLKTYFSQEISKWLKAHPGRVVTQFQIAGLLNEAYGKAATVQNICHGFKSTGIWPLNPDIFPDYMYEPAETTNIPLEDTSREQRHDQTLDLVTIAGPSTQQQDDTSLLPGSNVPQVAAITPNDNNTAEITVTEQQVDTSQTLSTESAAYKEHPTFYTLTVPIAEISPVPKGRFISGQGKRKPKNRQTSVVLTSTPNMEVIKSKNEPKAPPEKRRRNVTKTLFEEDSDEENFPNNYQDDEEDCACIYCNDLFSRSKPGEDWLRCLNCLRWAHASCADVPKRTKRFICELCH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01152061;
- 90% Identity
- iTF_01152066; iTF_01152064;
- 80% Identity
- -