Basic Information

Gene Symbol
kn_1
Assembly
GCA_963082885.1
Location
OY720180.1:12814013-12833527[+]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1e-143 9.7e-140 467.7 0.0 182 387 21 234 16 238 0.98
2 2 4.3e-07 0.004 16.6 3.2 420 471 243 297 235 403 0.73

Sequence Information

Coding Sequence
ATGAAACCAAATAGGAAAATTGGATATATTTCGACTTATGAATTACATCTTCGTCTAATCAGGTTTTTCCTGAAGTTCTTCCTAAAATGTAATCAGAATTGTTTGAAGAATGCTGGCAACCCTCGTGACATGAGAAGGTTTCAGGTGGTAATATCAACTCAAGTGATGGTCGACGGTCCTCTACTAGCGATATCGGACAACATGTTCGTTCACAACAACAGCAAGCACGGCCGGAGGGCGAAGCGATTAGATCCTAGCGAAGGTTTATATCCCCCGTTGCCCGTAGCAACGCCGTGTATCAAAGCGATATCGCCGAGCGAAGGTTGGACGTCTGGCGGGTCAACCGTCATCATAGTAGGGGACAATTTCTTCGATGGACTACAGGTTGTCTTCGGGACCATGCTAGTTTGGAGTGAGCTAATAACATCGCACGCGATAAGAGTGCAGACACCGCCGAGACATATACCGGGAGTAGTGGAGGTGACGCTTTCATACAAGAGTAAGCAGTTTTGTAAGGGGGCACCCGGCAgatttgtttatgtttCAGCGTTGAACGAACCAACGATAGATTATGGCTTTCAGAGGCTACAGAAACTTATACCGAGACATCCCGGGGACCCGGAAAAATTGCCTAAGgAAATAATTCTAAAGCGTGCGGCGGATTTGGCGGAAGCACTTTACTCGATGCCGCGGAATAATCAACTAGGATTGGGCGCGCCTCGGTCGCCTCCTGCAAGTATGCCTTTCAACTCGTACACCGGGCAGTTGGCAGTGAGTGTGCAGGACACTGCGGCTTCGCAGTGGACTGAAGAGGAGTTCGCACGCAACGGCGGAGGGTCGGTGTCGCCGCGCTACTGCAGCGCCGCGTCCACGCCGCACGCGCACTCCGCGCCCGCCGCCTACCCGCACCCGCAGCACTACCCCGCGCCACCTACCTCGCTGTTTAATACTAGTTCACTGTCTCTAGGACCCTACCACCCGGCCAACATGAATGGACACTTATCATCTGACCGTCACTATAACGCGTATAATATGAAAGATAGCGGACATTACAGTGAAAGAAATGGCTCTAAAAGCTTGGCCGACTGTCCGGTAAACATTCATACAAAATGCACCGACAGCGATATGAAAGGGGCACAGAATAAAGAGGCGAAACTAAGAAGCGCCTTTGCCGTTGTGAGGCAAAGCCCCAATGAAAATCATCAGAATTGGCAACATCTCGCCGTTCAATTTTCATCTCCATTCAGCGTGAACCCATTCTCATTGCCGACCTGCAGCGCCCAGCAATACGCACAAACAGCACCTCTAGCCTCCAAGTAG
Protein Sequence
MKPNRKIGYISTYELHLRLIRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPSEGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEEEFARNGGGSVSPRYCSAASTPHAHSAPAAYPHPQHYPAPPTSLFNTSSLSLGPYHPANMNGHLSSDRHYNAYNMKDSGHYSERNGSKSLADCPVNIHTKCTDSDMKGAQNKEAKLRSAFAVVRQSPNENHQNWQHLAVQFSSPFSVNPFSLPTCSAQQYAQTAPLASK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00036409;
90% Identity
iTF_00176893;
80% Identity
-