Basic Information

Insect: Pararge aegeria
Gene Symbol: -
Assembly: GCA_905163445.1
Location: NC:17481323-17498235[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.077 3.1 8.0 4.2 1 23 735 757 735 757 0.97

2 9 0.0023 0.095 12.8 1.4 1 23 804 827 804 827 0.96

3 9 0.089 3.7 7.8 0.1 3 23 834 854 833 854 0.96

4 9 2.9e-05 0.0012 18.8 4.9 1 23 860 882 860 882 0.98

5 9 0.00037 0.015 15.3 0.5 1 23 887 909 887 909 0.96

6 9 5.7e-06 0.00023 21.0 1.5 1 23 918 940 918 940 0.99

7 9 4.3e-06 0.00018 21.4 0.7 1 23 946 969 946 969 0.95

8 9 0.092 3.8 7.8 0.3 1 13 975 987 975 998 0.82

9 9 1.4 56 4.1 4.0 1 23 1006 1029 1006 1029 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.077	3.1	8.0	4.2	1	23	735	757	735	757	0.97
2	9	0.0023	0.095	12.8	1.4	1	23	804	827	804	827	0.96
3	9	0.089	3.7	7.8	0.1	3	23	834	854	833	854	0.96
4	9	2.9e-05	0.0012	18.8	4.9	1	23	860	882	860	882	0.98
5	9	0.00037	0.015	15.3	0.5	1	23	887	909	887	909	0.96
6	9	5.7e-06	0.00023	21.0	1.5	1	23	918	940	918	940	0.99
7	9	4.3e-06	0.00018	21.4	0.7	1	23	946	969	946	969	0.95
8	9	0.092	3.8	7.8	0.3	1	13	975	987	975	998	0.82
9	9	1.4	56	4.1	4.0	1	23	1006	1029	1006	1029	0.93

Sequence Information

Coding Sequence: atgttacatAACACGGGCCCTTTCGGGCCGAATGATGTGCCAGTAAACGTGAATCCGCAATCAAACATGACCTCTATGAGTGGAAGGATGAATATTgggaataacataaataatttagcgaaatTACCACAACAGTCGCCTCAGATGGCAAACCCGCACTTCAATTTACCGGATTATCCTACCTACGGGTTAAATATGAACGCAGGTTTGAGCCCATTTCAAAATTTTCACCATGTTGGTTTTCAACAAAATACACTTCCACAAAGTTCAATTCACGAGAGCTGGCAAAACAACATGTTGCCTATGAACTTGAACATGCAAAGCGAGCATTCCATGCTGGGTTTTCCGCAATACAGCAAACCTGATGTCAGCGAACAGAGTTTCGCCAAGAGTATGTTAAACGTACCTCAAGTGCACACAAAGGCATTTCACAAACAGATGGGCATGGATGTCAACTATCACTACAACTTAAATCCTAGTTATCGACCATATGCTGATTACAATTTAGATTTGAGTGCTAAACCTAAATCAGATGATGTTCGTCAGTTCCTTGACCCAAATATTGCTAAGGAGCGTGTAGCACCTAGTCCGCACTACTCTGAGCAGATTGATTTAAGCAATAAACACAAAATGCATAATTTCACACGACCATACTTAGAAACAGCCACAACAAAATCTCTGATCCCCCAAAAACATGATGACACTAGTGGCAatgtaaataatgatttaagtgTGCAGCTACAACGCTCAAAAGACAAACATCCTTATTTTGACTATGCTAACAGTGTAAAGCCTCAATTGGGTGTGGAAAATAGATATGGAGAAAGTGAGTTAGATTTATCAAAATCTTTTAAACATAGTAACTTGAACAGTAACTATCAGAATATAAGTGCAGATCACAGATTTTACAAGGATCAAGAGATAAGGCCCCAGAGTAATGAAATGTTGCCTAAGTTTCAACAACCCAATAACTTGAGTACCAATTACTCAAGTATGACCGCAGACTTAAGAATGTATAAGGATCAGGATCGAATATCTTCAAATTTAGAAAGGATTCTCAGTAAGCCACTGACTGAAAACTTAAATACATCTTTTCCGAGTGTCAATTCAGACCTCAGATATTATAAAGACAAAGAGGCCAGGTCACAAAATTTAGAAGCCATATTGTCTAAAACTCCAAAACCTGAAAATCTGAACACTAATTACTCGAGTACTACTACAGACCATAGGTTTGCTACTGAAACTAAGTCAAGGGCACAAAACAATGATGATGCTATACCTAAAATTCCTCAAACAGAAGCTAGTTTAACCACTGATTCCACAAAAGTTAGCTCAGACCTAAGAATGTTTAAGAATGACAATCCAAGCCcacaaaatttagaaaaaagtgTACCAAAGCCACAGCCAGAAAAGTTAACTACCAACTATCAGCCTATTAACTCAGAGTTAAGGTTTTATAAAGACCAAGATTCCAGGCGCCGGAGTTTGGAGAACACTGttaaaatgattgaaaataTACTATCACATTCATCAAACTCTAGAAAAAGTCAATCAAACTCTTATTCAAGTAAATCAGCAGAACCTCAACCGAATGAACAAAAAGACAGATCTGAAACAAAAGATACAGAAAATGATAGCTTAAACAAAAGCGATATTAACACAACAGGTACTGGTAGTAATACAACATGTGAAGGTGATTCAAgtattgataatatttcaaatgGTGACAAAAGTGATGAATCTAATGCAAACACTAGCAATGAATTAGAAGATGATAATGggaatgaagatgatgaaatgGATGAAAAAGTTCAGAGTAATGACGAAAGTGATTCTGAAGCTGATGGTATAAATAATGGATCTACTAACCAAAgtgagaaagaaataaatactaataaagtaACCATAAAAGAGGATGTAAAATCAGAGAGTGAAGACTCTTCATCAGAAGAAGATGTTAAACCAATGGATCTGTTCAATGAAAATGACCTTAAGAAGGAAGATAAAATAGATGATACTATTGTTGTGAAAGTTGAGGTATTACCAAATATAGTTGATATGGAGCATTTGAATCCATTCTACAGAGATGTTTTCGGAGTACAAAGTGATGATACAGCTAGTAATGATATAATTGAATCAGAGACCAGTGTTACTGTCGCTAAGGAGGTCATAAGGAatgGTGCAGCAATCGAAGGCGCGTTTTTCGAATGTCCACACTGCAGTCTATACTTCAATCATCCTAAGAGGTTCCTAATCCATACAAAATGGCACACTTTTGGATTAACCAATGAGAAACGAACGGAGTTACAAAAAGAGAAGGAAATGAGAAAGCAGCTGAGGAAAGAAGCAAGAGTGTTGGAGAGGATGCATATGAATGAAGTTAACGATATCAGTGCTCCAGGGAGGAAGTTCAACTGCAGAGATTGTGATAAGGTGTTCCTTGGTAAAGCCAGCCTGAAGAACCATAGACAGAGatatcaTCCAACACGCGTGCGCGACTGCAAAATCTGCGGCAAGACAATGCTAGGCTGGATGGCTCTTCGGGCTCATATGGCGACCCATATTTGCGAGTCGGGCTACCAGTGTGATAGATGCCCCAAGCGGTTCAAGCACCCGCACTCGTTGGCCAAGCATCGTGACACCCACTTGGAGAAAACACACGCGTGTCCGCAATGCCCCAAGAAGTTCGGCTCCGCGATGCTGCTGAACGTGCATTCGAAAACACACGAGCGGGCATTGCGTGGAGCGACATTCCGGTGTACGTACTGCGGGAAAGGGTTCTTCGAGTCCTACAGTTTACAGGTACACGAGAGGACACATCGCAACGAGCGACCGTACTTGTGCGAGATCTGCAACACAAGCTTCGGCACCAATTCCAGTCTGAAGAGACATTTGAAAGTCTCCCATAGCACCTCGAAGCCGTTTGAGTGCCCGACCTGCCACCGCTCGTTCATCTCGGAGGCGATCCGGGATCGGCACGCGATGCGTAACCATGGCAACCCGGAGGACTTCAAGTTCCTGTGCAAGCAGTGCCCGTGCAAGTACCTCAAGCTGAAGGACTTGCGAAAACACATGTACAAAGTGCACCCGAAGGGCAAGAGGAAGAAAAAGGACCAATCCGATTCCGAGTAA
Protein Sequence: MLHNTGPFGPNDVPVNVNPQSNMTSMSGRMNIGNNINNLAKLPQQSPQMANPHFNLPDYPTYGLNMNAGLSPFQNFHHVGFQQNTLPQSSIHESWQNNMLPMNLNMQSEHSMLGFPQYSKPDVSEQSFAKSMLNVPQVHTKAFHKQMGMDVNYHYNLNPSYRPYADYNLDLSAKPKSDDVRQFLDPNIAKERVAPSPHYSEQIDLSNKHKMHNFTRPYLETATTKSLIPQKHDDTSGNVNNDLSVQLQRSKDKHPYFDYANSVKPQLGVENRYGESELDLSKSFKHSNLNSNYQNISADHRFYKDQEIRPQSNEMLPKFQQPNNLSTNYSSMTADLRMYKDQDRISSNLERILSKPLTENLNTSFPSVNSDLRYYKDKEARSQNLEAILSKTPKPENLNTNYSSTTTDHRFATETKSRAQNNDDAIPKIPQTEASLTTDSTKVSSDLRMFKNDNPSPQNLEKSVPKPQPEKLTTNYQPINSELRFYKDQDSRRRSLENTVKMIENILSHSSNSRKSQSNSYSSKSAEPQPNEQKDRSETKDTENDSLNKSDINTTGTGSNTTCEGDSSIDNISNGDKSDESNANTSNELEDDNGNEDDEMDEKVQSNDESDSEADGINNGSTNQSEKEINTNKVTIKEDVKSESEDSSSEEDVKPMDLFNENDLKKEDKIDDTIVVKVEVLPNIVDMEHLNPFYRDVFGVQSDDTASNDIIESETSVTVAKEVIRNGAAIEGAFFECPHCSLYFNHPKRFLIHTKWHTFGLTNEKRTELQKEKEMRKQLRKEARVLERMHMNEVNDISAPGRKFNCRDCDKVFLGKASLKNHRQRYHPTRVRDCKICGKTMLGWMALRAHMATHICESGYQCDRCPKRFKHPHSLAKHRDTHLEKTHACPQCPKKFGSAMLLNVHSKTHERALRGATFRCTYCGKGFFESYSLQVHERTHRNERPYLCEICNTSFGTNSSLKRHLKVSHSTSKPFECPTCHRSFISEAIRDRHAMRNHGNPEDFKFLCKQCPCKYLKLKDLRKHMYKVHPKGKRKKKDQSDSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00205487;
90% Identity: -
80% Identity: -