Basic Information

Insect: Pararge aegeria
Gene Symbol: -
Assembly: GCA_905163445.1
Location: NC:6979239-6994187[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.086 3.5 7.9 0.9 1 23 283 305 283 305 0.98

2 10 0.63 26 5.1 0.4 3 23 329 350 327 350 0.94

3 10 0.44 18 5.6 0.1 2 23 373 394 372 394 0.93

4 10 0.03 1.2 9.3 0.8 1 23 398 420 398 420 0.96

5 10 0.0025 0.1 12.7 1.7 1 23 426 449 426 449 0.85

6 10 0.04 1.6 8.9 1.1 2 23 456 478 455 478 0.91

7 10 1.3e-06 5.3e-05 23.0 1.3 1 23 484 507 484 507 0.98

8 10 9.2e-05 0.0037 17.2 1.4 1 23 513 535 513 535 0.98

9 10 1.2e-06 4.9e-05 23.1 3.4 1 23 541 563 541 563 0.99

10 10 4.9e-07 2e-05 24.4 2.7 1 23 569 591 569 592 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.086	3.5	7.9	0.9	1	23	283	305	283	305	0.98
2	10	0.63	26	5.1	0.4	3	23	329	350	327	350	0.94
3	10	0.44	18	5.6	0.1	2	23	373	394	372	394	0.93
4	10	0.03	1.2	9.3	0.8	1	23	398	420	398	420	0.96
5	10	0.0025	0.1	12.7	1.7	1	23	426	449	426	449	0.85
6	10	0.04	1.6	8.9	1.1	2	23	456	478	455	478	0.91
7	10	1.3e-06	5.3e-05	23.0	1.3	1	23	484	507	484	507	0.98
8	10	9.2e-05	0.0037	17.2	1.4	1	23	513	535	513	535	0.98
9	10	1.2e-06	4.9e-05	23.1	3.4	1	23	541	563	541	563	0.99
10	10	4.9e-07	2e-05	24.4	2.7	1	23	569	591	569	592	0.96

Sequence Information

Coding Sequence: ATGGCTCTAATAAAGAATAACGGGCCTATAATAGACCCAGCGCTTTGTAGATGCTGCAGGGCTATCAAGAAGTGCAGGCTTCTTACTGCTGAGTATATCTGGATGGAGCAGAAAGAGGTCTACGCCGATATGATAATGGATTGCTTTGGTATACTCCTCTCGCATGTGGACGATGAAGCCAAGGACAGCGGCGTGTGCGCAACTTGCGTTGTGCGGCTAAGGGACGCGTGCGCCTTCCGCCACCAGGTGCTGCAGTGCGAGGACATGTTCCTAAGCGCTAAACTGGAGGATAAAGATGAAGCTAAGAAGGTTGCTGAGATCGAATTGAAAACGGAGCCAAAGGATGACGTCAGCGATCATAACTCTACAGGTCACGAAGAACACAACGAGATTATACCCGTTCAATACACTGCCCCCCCGCCgaaagCAGATGTCAAACCAAAAGACGAAGAGGAGAAAATACAAATAGAGACAGAAGAAAAAGATATTCCGAAGGAGATGGACCTGGATCACGATGACGTCGACGATATGGACTATCAAGACAACGGGCTCAACGACTACTCCTCGTCAGACTCCGACAAGCCCATCAAGAAGAAGGTCAGGGCGAAGAAGATGAAGACAAAGAGCAGCGGGACGAAGAAGAAGGTTGGCAAGAAGAAAGGCGCTAAGTTAAAAAAGAAGAGCAAAAATAAAGAGTCATCAATTGACGAGgatctaaaaataaagaaaccacctttagaaaagaaaaataccCACGACCGTGACCTAGATTGCATGTCTGAAGAAAATCTCCTCACCATCATACAATACTCTTATGTGTGTCCGTTTAAGAACAGAAGGAATAACTACTACTGCTTCTACTGTAAAGACTACTATCCTAAACCCGAGGATTTGAGGGAACACACATTATCTCACGACACAAAACCGTTCCAACTTTTAATGGGCTACAAGAAAATGCCTAAACTCGATATAACGAGGATAGATTGTCGGCTGTGTCCAATGAAAATCAATGACCTGGAATTATTCAAGCATCACATAGACAAAGTACACAATAAGAAAATTTACTTCGAAGCCCAGGACAAGATGCTTCTTTACAGATTAACGTGGAACGATTTAGTGTGTGTAATGTGCAGTGGTGTTTACGAAGACTTCAATACATTAAACACACATATGGTCGAGCATTTCAGCAATTATACATGCGATGTATGCGGTTTGTGTTTCCTAGAAAAGCCGAGGTTGGACGCACATCTTAAGAGGCATAAGGACGACGAGAGACACACGTGTGAGGTTTGCGGCAAAGTGTTCAAATCGAACCATTACAAGGATATGCATGTGGATATAGTGCACAAGAAGAAAGCTATAATACGTTGCCCCAGGTGTGACGAGTGTTTTATGTCGTACGCATTAAAAAATAAGCATCTGACCGAGGCGCACGGTCAGAAACGTACATATCCGTGCAATTTGTGTGACAAAGTGTATAACAGACAGAAGACATTAACCGAGCATCAACGCAGGAATCACCAGAAGGTACTGAAGCACCAGTGTGAATATTGCGATCAGAGATTCTATCTACCCTCCAGGTTAAAGGAACACATAGCCACCCATACCGGGGAGAGAAACTTTAGGTGTGAACATTGTGACAAGAGCTATCCGAGGCTCAAGTCTTTACAGTATCACATACGGACCCATACGAATGACAGACGTTACAGATGCCATATATGCGGGCAGGCGTTCATACAGAAtgcgagtttgaaatcacatataaagaGCCATCATCCCGAGTGTGATATTGATGGGTGCTATTTTTGA
Protein Sequence: MALIKNNGPIIDPALCRCCRAIKKCRLLTAEYIWMEQKEVYADMIMDCFGILLSHVDDEAKDSGVCATCVVRLRDACAFRHQVLQCEDMFLSAKLEDKDEAKKVAEIELKTEPKDDVSDHNSTGHEEHNEIIPVQYTAPPPKADVKPKDEEEKIQIETEEKDIPKEMDLDHDDVDDMDYQDNGLNDYSSSDSDKPIKKKVRAKKMKTKSSGTKKKVGKKKGAKLKKKSKNKESSIDEDLKIKKPPLEKKNTHDRDLDCMSEENLLTIIQYSYVCPFKNRRNNYYCFYCKDYYPKPEDLREHTLSHDTKPFQLLMGYKKMPKLDITRIDCRLCPMKINDLELFKHHIDKVHNKKIYFEAQDKMLLYRLTWNDLVCVMCSGVYEDFNTLNTHMVEHFSNYTCDVCGLCFLEKPRLDAHLKRHKDDERHTCEVCGKVFKSNHYKDMHVDIVHKKKAIIRCPRCDECFMSYALKNKHLTEAHGQKRTYPCNLCDKVYNRQKTLTEHQRRNHQKVLKHQCEYCDQRFYLPSRLKEHIATHTGERNFRCEHCDKSYPRLKSLQYHIRTHTNDRRYRCHICGQAFIQNASLKSHIKSHHPECDIDGCYF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00953844;
90% Identity: iTF_01021631; iTF_00205470;
80% Identity: -