Paeg010094.1
Basic Information
- Insect
- Pararge aegeria
- Gene Symbol
- ZNF526
- Assembly
- GCA_905163445.1
- Location
- NC:2201045-2230462[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.82 34 4.8 1.9 1 19 495 513 495 517 0.89 2 17 0.0017 0.068 13.2 0.0 1 23 527 550 527 550 0.95 3 17 0.16 6.7 7.0 3.3 1 21 686 706 686 707 0.93 4 17 0.037 1.5 9.0 3.8 2 23 771 792 770 792 0.95 5 17 0.0001 0.0041 17.1 0.8 2 23 835 858 834 858 0.97 6 17 0.072 2.9 8.1 0.2 1 23 864 886 864 886 0.93 7 17 0.0022 0.092 12.8 3.3 1 23 892 914 892 914 0.98 8 17 0.59 24 5.2 0.0 2 19 925 942 924 945 0.88 9 17 0.8 33 4.8 0.3 1 23 1023 1045 1023 1045 0.95 10 17 8 3.3e+02 1.7 7.2 1 23 1052 1074 1052 1074 0.95 11 17 0.0065 0.27 11.4 2.4 1 23 1109 1132 1109 1132 0.95 12 17 0.017 0.68 10.1 1.0 1 23 1139 1162 1139 1162 0.97 13 17 0.02 0.81 9.9 0.1 2 23 1184 1206 1183 1206 0.95 14 17 0.23 9.4 6.5 0.9 2 23 1227 1249 1226 1249 0.95 15 17 0.0081 0.33 11.1 0.3 1 23 1260 1282 1260 1282 0.96 16 17 0.00013 0.0051 16.8 0.1 1 23 1288 1310 1288 1310 0.97 17 17 5.4e-05 0.0022 17.9 2.5 3 23 1318 1339 1318 1339 0.97
Sequence Information
- Coding Sequence
- ATGACGGAACTGGAACCTTTAGTTCTCTGCATGGAGAATATCAGTGGAGAAGAAGTAGCACTGAAGATTGAACCGCAAGACTCTTTTCAGGACTTTCTGGAGAATGCTAAACTTCTATTAGGCTATGAAATGGACATAAACTCTATAACCGAAAATCAACCAGTTTCTTTAGACAGCaacatatataattttctaTTAGAAGCAGaacagaattttaaaaattctacacTCAATCAACAAAACCTTGATGAAATAATGGATGATAATGAGACAGATGATCTAGTTTACATACTAGATGATGGTACTCAGATACGTGCTTCCCAAATTCAGTTCGATAATGATGATCCTCTTGTAGATTTGACAGCTGAAAAAATACCTTTCGTTAAATACAAGGAcgaaagtgatgatgataacaaaacaGATATAGAGAATACagatattacaataaaaaatattaatatattaggtAGTCCAGTAGAGCGTTGGTCGAGTAAAGATAGCCCTAAGTGCAGTTTCGCTAATAGTCTACCTTTCAATGTAGTATGTAATAACACATCGAACTTTGAGGCGCAATTTTCTAAATACCTTGAATCCAATTCTAAAACGTACacaaatttgaataatgctaataaaaataaatcacctAGAAGTTTAATTAGggagaattataaaaaatatgacgaTATTAATAGCAGGAACGATGGGTTTCTTACAAGggaagatatattaaatatgtttaaagatACACCAGTGACTCCTTTACCTTACGATGATAATACTCAATTTGATAAACGCAGACACGTAAGAAAAACAGATCCGTCCAGACTAGTTTATAAAAACTGGAATGCCAAACCTATAATAGATATTGAATTGGGCTTAGAGAAGCAGAATTGTTTCATTTGTTGCAAAATTGTcaagaataatgaaaaattgtatttgtttgATAAGGAAGACCAGATGCTACATAGGTGTGAACAAAGAAAGTACAATACACAGCTAAAAATTATATGCGAAAAATGTCTAACAGAAAACTTCAAGCCAAGTAGAATAAAGAGTCCGAATCAGTCATTAgacgatgatgaatatttagttataaaaaacaatcaACAATTCATATTCCAAAAAACGAGTGATATAAACCTGAAgagtagttattttattaataacattaacatgaataataacaatacagacaaaattgacaaaataaataaattgacgaAGAATAAAGAGAGTGTTGAGTTCGTGAAAGTTGAAATTGGTCCGGATGGAGAGATTGTCACTAAACCGATAGACAATGACGTGAAATCTGATGACGTCATTATAGTTAAAGAGAAAAAGGACAGTTCAAGTGACGTCGATATTATAGAACCGGAAGTAATGGAAGTGGAGGCGGAAATAGATGTGGATAATTTAGAGGATGTGGATGAAGATGTGAAAGAGTTTTTGGGGAAGTACCAgtgtgatattaaaaataaggaGTTCAAGTGCAGGTTTTGTCAGAGAGAATTCAAGAATTTGGATGAAGCTATCGACCACTGTGCGGAACATAAGCACGAGCTTGATGATGGGGTTGTATTCCCATGCCCTCTATGTGATTACGGTTACGCAAATTCAAAATGGCTGAAAGGTCACCTGAAAGCTGCTCATGACAACTTGAAGGAAGATCATGAGGTAAAGGATGAAAATATTACCATCAAAGAAGAAGACAGTACCGTTAAAGAAGGAGATGATACTGTTAAAGAAGAAAagaatgATAAAGAACAAAACAATACTCCAGAATCTTCCCCCGTCGCCAAAAGAACTAGAAGTTCCATCAAGAAGATCGACGTTGATAATATTAACAACGGTATAGATGAACAACAACCTACAGAAAATGGGAACATTGCTAtcCAGCAAGAACAACCAAAGGTAAAAACTGAAGTCGAACAAGAATGTCAAGACAGCAGCGATGGCGATTCCATATGGATAGTGCAAACAGGCGATGATGACGAGCAGCTGAATAATTTGTTACGgtTAACAGATGTGAAATCAGATGTCAACGATTTAAAGAGGCACAAATGTTTTTCTTGCAGTCAAATCTTCCCCACGGCAGATAGTCTGAGAACTCATAAATGTCGAAAGCGAGTTGGTAAACGACGATTCAATTTACTAAAGGAGAAGTCTGTGGTATTGGTATCCAGAGAAGAGGATTTTATGAAGagggctcaaaaaaaaattcgtgaAGTAGAAGATGACGAGAATAATGATCTTTTAGTcgtgAGACCCCGTAAAAGAAAAACTCGTGAACTCAGCGATCCTCAAATTGTCACGTGTCACAACTGTAATGAGTCTTTTACATCGAAAGTGAGACTCAAATTTCACATGCAGTTCCACGAACCGACCAACCTTCTGACCTCGGAGGGTCAGTACGTGTGCGCGGAGTGTGAAAACGCCACCTTCGTCTCAGAAACAAAGCTCTTCGACCACGTGCACTTTCAGCATAGCAAGCAGAAACGCTGGCAGTGCCCACTCAAGGACTGCGGGAAGACTTTCTTTTTGCGGGCAACATTGACGAAACACAGtcgcacacacacagacacaagACGCTACGTCTGTGTGACTTGCGGTAAAAGGTTCCTCGACAAACAGACTTTGGACGAGCATGGAGTCACACATCTCCAGATCAAACCGTTTCAATGCCACATATGCCTCAAGCAGCTGACGCGCAGGTCTCGTCTGCGCATGCATTTGCGAGCTCATGAGGAAGAGCTTTCGCCCGCACTGGTGCTAGTGTGTGCGATCTGCAGCCGGGCTTTCAGAGATCACGTCGACGCTCAGGAGCATGCCGCAAAATCCACGGAATGCATTGATGAATTTACAAGCGATCTCAAAGAAGAGCCGGAGCCCACCGAACAACTGTCTCCCACCAGTGGGATTGTAAGACACACTTTGCCCGTTGCCGAATCCCATCGCAACGAAACGTGTATACCGAAAGAAGTTAATAACGACAAGAGCGAAAAACTATTGTCACCTTTAAACGACGCCGCCAGAAATATAATACGCGTGGTAGATATCGAGAAGGCTTTCCGATGTGAATATTGTGAAGATGTATATTACTTGGAGGAGGCTTTAAACAGTCATAGAACATTACACAAAGGTGTCAAAAATCCTTTTACCTGTCACATTTGCAAAGTTAACTTTGCTACATACTCTAGGTGCACAACACACAAAACGACACACGGTTTTTACAAGCGGAGTACCATAGAGGGACGTACGGAGGGACGCACTGGCCCAGCGAGTGCTGGCATTCTTGGTTATGGAGGTTTCCCTGTAGTGAAACACTTTCTGTGTGAGgactGTGGTCGATCTTACCTACATTGGACTTATTTCCAAGTTCATCGCCGTATGAAACATgctaatgaaaattatattttcaaatgcaATCAGTGTGAACTAACTTTTCCAAACagTTGGAGCGCATCTtatcacagaaaaaaaatacacagtaAAAATGGGCAGGACGAAAACGGCGGTTTTACAAAGATCATTCGAGAAAATAACAGAATTCCATGTCGTGATTGCGACGAAGTTTTGCCAGACAAAATTGCTCTCTATAAGCACAGACAGAAGGAGCATTGCGATGAAAGTCTGATGGATAAAGgGGACTGGACAGATAACGAAGACTCTGAAACCACAGTTTGCAATAAATGTGGTCATGATTTACACAGCGTAGCAGCACTGCGGCAGCATATCAAagaaGTTCATGGTGGCTCTCCTGTGGCTCGTGCGCACTCGCACGCTTGCCCGGTATGTGCGCGCTCATTCCGCTCAGCATCCGTACGCAATGAACACGTTCGTGTGCACACTGGCGAGAGGCCGTTCCCGTGTGACGTATGCGGAGTCGCTTTTAGACGTTCCACAGCTATGCGGAACCACCGGCTCATCCACACGGGCACCCGGCCCTGGGGCTGCTCACGGTGTCCCAAGCGATTCCGCGTCAAATCCGACCTGAAGACCCATATGAGGCTAAAGCATCCCGCACATTTGGCTGTAATCGAGATCGAAGGGTTGCACTGTACTACAGAAGAGGTCCTGCAACATCTGAACAACAACAATATAAGTCGGGACAAAGTTATTGAGATTACAATGATTTCTTTTCCCAAGAACACCACAAACATAGTTCCCAACACAATGCGAGCTCTGTCCATGCTAAGCGACATTCCGAGAACGCAAATCGCTTGCGACTGGGACACGCGGGCGTCTTCGCTTGATCAAACCGGTGAATGTATTGCAACCACTCCGACGCGGTAG
- Protein Sequence
- MTELEPLVLCMENISGEEVALKIEPQDSFQDFLENAKLLLGYEMDINSITENQPVSLDSNIYNFLLEAEQNFKNSTLNQQNLDEIMDDNETDDLVYILDDGTQIRASQIQFDNDDPLVDLTAEKIPFVKYKDESDDDNKTDIENTDITIKNINILGSPVERWSSKDSPKCSFANSLPFNVVCNNTSNFEAQFSKYLESNSKTYTNLNNANKNKSPRSLIRENYKKYDDINSRNDGFLTREDILNMFKDTPVTPLPYDDNTQFDKRRHVRKTDPSRLVYKNWNAKPIIDIELGLEKQNCFICCKIVKNNEKLYLFDKEDQMLHRCEQRKYNTQLKIICEKCLTENFKPSRIKSPNQSLDDDEYLVIKNNQQFIFQKTSDINLKSSYFINNINMNNNNTDKIDKINKLTKNKESVEFVKVEIGPDGEIVTKPIDNDVKSDDVIIVKEKKDSSSDVDIIEPEVMEVEAEIDVDNLEDVDEDVKEFLGKYQCDIKNKEFKCRFCQREFKNLDEAIDHCAEHKHELDDGVVFPCPLCDYGYANSKWLKGHLKAAHDNLKEDHEVKDENITIKEEDSTVKEGDDTVKEEKNDKEQNNTPESSPVAKRTRSSIKKIDVDNINNGIDEQQPTENGNIAIQQEQPKVKTEVEQECQDSSDGDSIWIVQTGDDDEQLNNLLRLTDVKSDVNDLKRHKCFSCSQIFPTADSLRTHKCRKRVGKRRFNLLKEKSVVLVSREEDFMKRAQKKIREVEDDENNDLLVVRPRKRKTRELSDPQIVTCHNCNESFTSKVRLKFHMQFHEPTNLLTSEGQYVCAECENATFVSETKLFDHVHFQHSKQKRWQCPLKDCGKTFFLRATLTKHSRTHTDTRRYVCVTCGKRFLDKQTLDEHGVTHLQIKPFQCHICLKQLTRRSRLRMHLRAHEEELSPALVLVCAICSRAFRDHVDAQEHAAKSTECIDEFTSDLKEEPEPTEQLSPTSGIVRHTLPVAESHRNETCIPKEVNNDKSEKLLSPLNDAARNIIRVVDIEKAFRCEYCEDVYYLEEALNSHRTLHKGVKNPFTCHICKVNFATYSRCTTHKTTHGFYKRSTIEGRTEGRTGPASAGILGYGGFPVVKHFLCEDCGRSYLHWTYFQVHRRMKHANENYIFKCNQCELTFPNSWSASYHRKKIHSKNGQDENGGFTKIIRENNRIPCRDCDEVLPDKIALYKHRQKEHCDESLMDKGDWTDNEDSETTVCNKCGHDLHSVAALRQHIKEVHGGSPVARAHSHACPVCARSFRSASVRNEHVRVHTGERPFPCDVCGVAFRRSTAMRNHRLIHTGTRPWGCSRCPKRFRVKSDLKTHMRLKHPAHLAVIEIEGLHCTTEEVLQHLNNNNISRDKVIEITMISFPKNTTNIVPNTMRALSMLSDIPRTQIACDWDTRASSLDQTGECIATTPTR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -