Paeg009923.1
Basic Information
- Insect
- Pararge aegeria
- Gene Symbol
- zfy1
- Assembly
- GCA_905163445.1
- Location
- NC:18394149-18411928[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 4 1.7e+02 2.6 0.3 2 23 6 27 5 27 0.94 2 13 0.56 23 5.3 0.2 1 23 989 1012 989 1012 0.87 3 13 0.0001 0.0043 17.0 3.3 3 23 1116 1136 1115 1136 0.98 4 13 0.00017 0.0071 16.3 2.7 1 23 1142 1164 1142 1164 0.98 5 13 0.0074 0.3 11.2 2.5 2 23 1171 1192 1170 1193 0.95 6 13 0.00012 0.005 16.8 0.5 1 23 1203 1225 1203 1225 0.98 7 13 0.016 0.64 10.2 0.9 3 23 1232 1253 1231 1253 0.96 8 13 0.029 1.2 9.4 0.0 2 23 1270 1290 1269 1290 0.96 9 13 0.00079 0.032 14.3 1.9 1 20 1296 1315 1296 1318 0.91 10 13 0.012 0.5 10.5 0.8 1 23 1326 1348 1326 1348 0.98 11 13 0.0072 0.29 11.3 7.7 1 23 1354 1376 1354 1376 0.98 12 13 1.9e-05 0.00076 19.4 1.3 1 23 1382 1406 1382 1406 0.95 13 13 0.00095 0.039 14.0 5.1 1 23 1412 1434 1412 1435 0.95
Sequence Information
- Coding Sequence
- ATGGATACGAGGGTGCAATGCCCTGTGTGTACACTGTACCTACACAGTGGCATGTCATTGGAGTCGCATTTGGATACACATCCAAAAGACCAAGTCATAAAAGCACTATGCAGTCTGTCAGCTAAGAGTACTGGGTTTGGAAGTAGGACTCCCACTCCCCACTCTGAGAGGTCATTCAGGAGCAGGTCACGCACTCCCGCTACTGATGATGGGCGATGGGCTGGATCTCATCGCACCAGTGAAAATGATAGGTACTGGAGGAGGACACCAAGTCGCAATAAGTCCACTCCACTCTCAAGCAGGACTGGAACTCCCGATACTAGAGTTGGAAATATTGTATTTGAGAgtgacaatataataaatacaaattccaATCAGTGCTCTGATGTATTTACTGTTAAGTCAGATAAGACACAGCGGACTTATGTGTCTACCGGTCAGTTGTCAGGCTCAGACTATGATCAGCGATTCCCATTCTTCCCAGAAGCACAGGAAGATACAGAGATAAAATATTCCCGTAGCTCTGAATATAATGCCCAGAATGAAAGTTTGAACACTGAATTTGCATATAATATGCCTTCACCTGCCAACAAGCAGGCAAACATCCCACCCACAACATCAAGGAGAACTAATGAACGAgactttgttaaaattttaccaAAAGCAAACAATGTGTTTATGAAAACAAATGTAGCAAGTGGTTTGCAATATGTAACACCAGGACCTAACCAGATGCATGTAATGATGCCAACGCCATCACAGTTTGTGCAAAAGAATGTGCAAAACAACATGATTTTGACTGGAAATTTAACTAGCGCCCAAATTCACAATTCAAAGTTGATGGCACCTCCACTGACTAATCAGTTATTAACATCAGGAACCTTTACCCCAGGAACAACTGTAGTTACACAAAACTCCCAAATCATTTACCGAGAGATGGTACATAATTTAGATGGTAAACCTTTTATGTCAACTATTCCTGCTGTACTGGGTTCTGTTGAGAATGTCACCAATGTGTCACAGAGTAGTGCATTGTACCAAAATCATCTTATGGTAGTTGACCAGTTTGGAAACACCTCTTGCATGTACACAACACCACAGCATTTAATTACTAAACCAGCCATTTTTAGTGAAAATATGACATACTTGCAAAGTATTGTAGAAAAACCTCCATCAAAGAATAATGACAAAACTCTATTAATTGAAGTTAGCCCTATCCCTGACTCTCCTGTAGCAGGCTCTAGCTCCCAGCCTGTGTCTAAATCCAATTCTGTAcataaaaaacatgaaaaacatgaaaaacttGAGCAGAAAAGGTCTGTATCAAGGAATAGCACTCCAGGGCCAAATAAAGGGCTTAAAATCATTAGTAATATAAAAGTGGAGGTTCCTGTGAAGCATCACAAAAATATGCTTAACACTATTATGGATCTGACAGGTTCAGGTGATTATACAGCACGTCCAATAAGTCCAGAGAAGATATTACCAGATTTAGATGACAACAACCAAAGTTTATGTGATGATTCAACACAGCCTTCCCTTGCAAGTGTAGATAGTATTGCTTCTAACACATTCTGTGCTATTAACAATTCCAGCAATGCATCTGGTAAAGAGTCAACTAAATCAGAGACTAAAATTGACTCAGAATTCTCTGACAGCTGTCCTGTGCCAGACCTCATTTGCAATGAGAAGCCTTCCATATCACCATGCAGTGAACTGTCTGAACATGGGGATAATTCAACCGATCACATAATAACAGCTCTTAAAACAGAACCCAATCATACATACGGAAGACGTATGATTAATAATACTgatatagaaaataaacaacGAAAACCGAAACCGCTGAGGATAAACAatgcatttgtaaaaaaaccaaaGAAGGTTTTGCAGATAAAGAACTCTAAATTTCCATGTACAAATGCAAAAGATACAAGTCAATTAGAAAAAGAGCCTGTAGCATCCTCTTCCAGAGCTAGATCACCTGAagactttgaaataaataaaatacatcgtCAAGAAACCAGTATTACTAATAGTAGTGGTATTACAAAACCTGGAACTCTACTTACAGTTTCAatagagaaaataaaagaaaatgatgAAGGCGAAAATAATGAGTTTGACGCTAACACTGAAGAGCAATCGATGGACATCGAGCCTGTAACACCATCAAATGTAAACCATTCTCAACAATATACAGCCTCGGTAGATATAGTGCAAGTTAAAGAAGAAATCAATACAAGTAATGATTTTAGTAACGAAGCAGACAAGCCTGGTTTTGATCTTGCACCAATGGCAACTTTACGGCCAATTAATGTTATCAGTTGTAGCATTGAAGAAGATTTCGATGATGACTCTAGCCATAGAGAGCTACTTGAATTAGAAGCAACAtctaaaaacaaacagtttGTTTCAATGATGAACGAAAATTATTTCGGCGATAACATTTATGCAGATTATTTTACTCCAGATCGCGTGGAAGCTTTCGAAGCTGAAAAGGAGTCGCAATTCACTAAAGAAAATAACAGAGAAAACATGTATATTTGGGGTGAGCCTTCTCAGAGGGAAAGCGAATTTGTTTTACCTAATTTTATTCATGAAAGCTATAAAATTGCTGAAAATGGTCTGGACTATTCAGACATGGGCGCGGAGGAAAATATTGATGGAGATAAGTGTGAGGGAGATAGCAAAGTAGATGTGTTAAGTGAGAGCAGAAGCGAAAGTGAAGCTCCATTGAATATTTGTGCAGATGAGAAAATGCCACCTAGGGGAGAACTTAGCGGACAAGAAAGCAATGGAGATATGGAATCTCCTTGGAGTGGAATGTACTCCGGCGTGCCGCCCGCGGAGCCCTACGACCTGATGGCGCGCGAGACCTGGGTCTCTGACGGCTCCGAGATCGACACCACTGAGAAGACCGAACCAATAGAAGAAGAGATCCACTTCCCCAAGACCCGTATGTACAACTGCGTACCGTGCGGCAACAAGTTCCCTTCGCTCAAAGAACTGCGCTCGCATAAAGCGCTCATGCACGCCTCGCCAACGTGCTCCACCACCAAGACTACGTACAGCCGTCTCCTCACCGCCAGAGCCATCAAGAAGGAAGAGAAACCGGATCCAAATGTCTTGCAAGaaaatcTCCTGCTAATGGACTCCAAAGAGACCATAGCAGCGACACTGCCGCAAGTCTACGACACAATGACCGACACCAAGCCGCCACTGGTTGGCCTCATCAAACAAGAGACCAAGAGGAGGCGCCGGGACTTCAGATGCCCAACGTGCAAGGTGGATCAGCTGACCGACATCGCTTTCCACGCACACCTAAAGTTCCACCCGCTGCTGTGCCTCACCTGCGGGAAGTGCTTCTACCGGCGCACCAACCTCGCGCTGCACCTTAAGACGCATCTGGGTGTCCGGAATTATAAGTGCGAGATCTGCGAGAAGAGGTTCATCACGCGCCAGAAGCTGTCGGAGCACCACAACATCCACACGGGCCGCTCGCCGGTCAAGTGCACCGTGTGCGACGACACCTTCCGCCGGTACTCAAACATGGTGCAGCATAGAGACCGCCACCACCTGAAGAAGAAGCCGAAGGTGCGCGACTTCGTGTGCCCGCAGTGCGGCGCCGTGTTCCACTCGCGCGCCAAGCTCCAGTGGCACAAAGAGACGCACGACGAGAAGCCCAAGGCGTGCGTGTACTGCAGCGACAAGTTCGTGCACGCGGCGTCGCTCACGCGCCACGTGCGCCGCTCGCACAACGAGTACTTCATGGCCAGCACCGAGAAGCACAAGACGCAGAACGTGCCGTGCCCCGTGTGCAAACAGGTGTACCTGCGGCCGAACCTGCGCGCGCACCTGCTGACGCACAGCGGCAAGCGGCCGTACCACTGCGTGGTGTGCAGCAAGGCGTTCACCACCAAGTGGAACCTCAAGCTGCACCGCTGGACGCACGTCAGCCGCTCCGCCAAGCCCTACAAGTGCGGCCTGTGCAAGGGCGCCTTCATCCGGCACACGGAGTACGTGTCGCACATGAACGCGCACAAGTCCGTGCGCCCGTACACGTGCAAGTACTGCGGCTGCCAGTTCATCCGCAAGTACAACTGCCAGAGGCACGTGCGCGAGCACGAGATGGCGAAGAAGTTCGCGTGCAAAGTGCCCGAGTGCGGGAAGACGTTCCACAGGAGTTACTACCTCTCCGAACATATGAAAGTGCACAGTGGCGCGAGACCGTTCTCGTGCAACATATGCGGGAAGACGTCCAGCAACAAGTCGAACCACAATAAGCACGTGAAGATACACCACGCGCGGGAACCTATCGCGACCGAGGCGTGA
- Protein Sequence
- MDTRVQCPVCTLYLHSGMSLESHLDTHPKDQVIKALCSLSAKSTGFGSRTPTPHSERSFRSRSRTPATDDGRWAGSHRTSENDRYWRRTPSRNKSTPLSSRTGTPDTRVGNIVFESDNIINTNSNQCSDVFTVKSDKTQRTYVSTGQLSGSDYDQRFPFFPEAQEDTEIKYSRSSEYNAQNESLNTEFAYNMPSPANKQANIPPTTSRRTNERDFVKILPKANNVFMKTNVASGLQYVTPGPNQMHVMMPTPSQFVQKNVQNNMILTGNLTSAQIHNSKLMAPPLTNQLLTSGTFTPGTTVVTQNSQIIYREMVHNLDGKPFMSTIPAVLGSVENVTNVSQSSALYQNHLMVVDQFGNTSCMYTTPQHLITKPAIFSENMTYLQSIVEKPPSKNNDKTLLIEVSPIPDSPVAGSSSQPVSKSNSVHKKHEKHEKLEQKRSVSRNSTPGPNKGLKIISNIKVEVPVKHHKNMLNTIMDLTGSGDYTARPISPEKILPDLDDNNQSLCDDSTQPSLASVDSIASNTFCAINNSSNASGKESTKSETKIDSEFSDSCPVPDLICNEKPSISPCSELSEHGDNSTDHIITALKTEPNHTYGRRMINNTDIENKQRKPKPLRINNAFVKKPKKVLQIKNSKFPCTNAKDTSQLEKEPVASSSRARSPEDFEINKIHRQETSITNSSGITKPGTLLTVSIEKIKENDEGENNEFDANTEEQSMDIEPVTPSNVNHSQQYTASVDIVQVKEEINTSNDFSNEADKPGFDLAPMATLRPINVISCSIEEDFDDDSSHRELLELEATSKNKQFVSMMNENYFGDNIYADYFTPDRVEAFEAEKESQFTKENNRENMYIWGEPSQRESEFVLPNFIHESYKIAENGLDYSDMGAEENIDGDKCEGDSKVDVLSESRSESEAPLNICADEKMPPRGELSGQESNGDMESPWSGMYSGVPPAEPYDLMARETWVSDGSEIDTTEKTEPIEEEIHFPKTRMYNCVPCGNKFPSLKELRSHKALMHASPTCSTTKTTYSRLLTARAIKKEEKPDPNVLQENLLLMDSKETIAATLPQVYDTMTDTKPPLVGLIKQETKRRRRDFRCPTCKVDQLTDIAFHAHLKFHPLLCLTCGKCFYRRTNLALHLKTHLGVRNYKCEICEKRFITRQKLSEHHNIHTGRSPVKCTVCDDTFRRYSNMVQHRDRHHLKKKPKVRDFVCPQCGAVFHSRAKLQWHKETHDEKPKACVYCSDKFVHAASLTRHVRRSHNEYFMASTEKHKTQNVPCPVCKQVYLRPNLRAHLLTHSGKRPYHCVVCSKAFTTKWNLKLHRWTHVSRSAKPYKCGLCKGAFIRHTEYVSHMNAHKSVRPYTCKYCGCQFIRKYNCQRHVREHEMAKKFACKVPECGKTFHRSYYLSEHMKVHSGARPFSCNICGKTSSNKSNHNKHVKIHHAREPIATEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00205447; iTF_01021584;
- 90% Identity
- -
- 80% Identity
- -