Basic Information

Insect: Pararge aegeria
Gene Symbol: -
Assembly: GCA_905163445.1
Location: NC:1935850-1971248[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0019 0.079 13.1 0.2 1 23 298 320 298 320 0.98

2 16 0.16 6.7 7.0 4.3 1 23 721 743 721 743 0.98

3 16 0.00021 0.0086 16.1 2.6 1 23 749 771 749 771 0.98

4 16 0.0024 0.1 12.7 0.6 1 23 777 799 777 799 0.97

5 16 0.012 0.5 10.5 5.0 1 23 805 827 805 827 0.98

6 16 9.5e-06 0.00039 20.3 0.4 2 23 834 855 833 855 0.97

7 16 0.003 0.12 12.5 0.9 1 23 861 883 861 883 0.96

8 16 0.0029 0.12 12.5 1.5 1 23 887 910 887 910 0.92

9 16 0.31 13 6.1 4.3 2 21 917 936 916 938 0.94

10 16 0.0069 0.28 11.3 7.4 1 23 951 973 951 973 0.98

11 16 0.00053 0.022 14.8 3.7 1 23 979 1001 979 1001 0.97

12 16 2.9e-05 0.0012 18.8 2.4 1 23 1007 1029 1007 1029 0.98

13 16 0.00031 0.013 15.5 1.4 1 23 1035 1057 1035 1057 0.97

14 16 3.6e-05 0.0015 18.5 5.5 1 23 1063 1085 1063 1085 0.98

15 16 0.0033 0.13 12.3 7.6 1 23 1091 1113 1091 1113 0.98

16 16 0.00062 0.025 14.6 4.9 1 23 1118 1140 1118 1140 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0019	0.079	13.1	0.2	1	23	298	320	298	320	0.98
2	16	0.16	6.7	7.0	4.3	1	23	721	743	721	743	0.98
3	16	0.00021	0.0086	16.1	2.6	1	23	749	771	749	771	0.98
4	16	0.0024	0.1	12.7	0.6	1	23	777	799	777	799	0.97
5	16	0.012	0.5	10.5	5.0	1	23	805	827	805	827	0.98
6	16	9.5e-06	0.00039	20.3	0.4	2	23	834	855	833	855	0.97
7	16	0.003	0.12	12.5	0.9	1	23	861	883	861	883	0.96
8	16	0.0029	0.12	12.5	1.5	1	23	887	910	887	910	0.92
9	16	0.31	13	6.1	4.3	2	21	917	936	916	938	0.94
10	16	0.0069	0.28	11.3	7.4	1	23	951	973	951	973	0.98
11	16	0.00053	0.022	14.8	3.7	1	23	979	1001	979	1001	0.97
12	16	2.9e-05	0.0012	18.8	2.4	1	23	1007	1029	1007	1029	0.98
13	16	0.00031	0.013	15.5	1.4	1	23	1035	1057	1035	1057	0.97
14	16	3.6e-05	0.0015	18.5	5.5	1	23	1063	1085	1063	1085	0.98
15	16	0.0033	0.13	12.3	7.6	1	23	1091	1113	1091	1113	0.98
16	16	0.00062	0.025	14.6	4.9	1	23	1118	1140	1118	1140	0.98

Sequence Information

Coding Sequence: ATGCATTGTTGTGTGCCTTTCTGTAAAACCAATACGGAGCTCGACTGCGGCTCCGAGGCGATAACATTTCATGAGCTCCCAAGTGAAGAACGTCTTCGTGCTGCTTGGCTCAGCGCCCTTGGCACGGAAGACACTCTCCTGCCAGACTCTGCTATGGTCTGCTCACAGCATTTTCTTGATGATGAGATGTATGAAACGGGAAGTGGCTTAAGGCAAATTTACGCTGGTGCTATACCCTCAACAGtgcagGTCTGCATGATGTGTCTCGATGCACACAGTAAGCTGTTTCAAATGAAGAAATACAAACTGGAAGGGGCATATGAAAATTTTGTGGGTCTGCCTttATGTAATGAGGGAAACCTGAAACAGACACTTTGTATACTATGCGCTCAGAGATTAATGAACTTCACTAAATTCAGGGACAAAAGCTTAAGAGCCCGTGCGCTGATGATGGATTTGGTTGAAAAACACAAACTAATAACATTACAACATATGGAATTGATggacaatttaaaaaatgaactaAAGCCTAACATAGTGAAGACCGTACTCAAGCCAGACCACTGTGATCTATACATAACACACTCTGACgaagacaaacagacagaaaacTCAACAGAATGCAATTTTGTTGGAGAAGTTGCAGTGAAAAATGAAGTTAGTCATGATACTATGTCGACAGATAATCAAACGCAACACAATCAAGTCAAAAAAGATAATGGGATTACGGCAAACAGTTTCAATCCCAATATAGTAATACTTAAAGAAGAATACATGTCTGACGATAGCATAACCGTAGAACCAAAGCAATTTAACGATCCTCTGCTAGTCAAACCGTCAACCTCAAAGGAATTAGTCGAATCATTGGcacaaattaaatatgaaataacatTTGAATGTAATACATGCTTCGTGGAGTTCGCAGATGAGGACACATATAATAACCACATGGCAATGCATATTCAGAATCAGAATCCTGATAGAGATTCAACCGCAGAAGACTACGCTCAAGGTTCAGTCGATCCTTTGCCATGGCGACTTGTGACAAACGTAACTAGTCTACATGGAGTTTCTACAACAGAAACCATCCAACCTGGCATTGAAAAGGTCTGTACTATATGTCTTGATACAGACTCAAAATTGTATGTCATGAGTGAATACAAAATGGATAAAGCATATGAATACTTAACGGGTCTTTCACTCAGCAACATGGAGCATGCAAAGTTTCTTTGCTTTGAATGTGTCCACAGATTATTGAGCTTCAGTAAATTTAGATGCAAGAGTTTAAGAGCCCGTTTGGTTATGGAGAATCTACTTAAAAACTACACTGAGATAACATTACAACATATAAAATCAATTGATCGAAACTTATACCGACTTAACTCGGGTATGGTGAAGATATTATTAGAACCTGATAACTGTGATTTATACATAGACAACTCTGATGTAGATAAACTAGTAGAAAGTGCAACAGAATACATAAATGATAGAGCAGTTGAAGAAATGATAAATGATGAAGTTCTTGACTCAATGATGGTCGGTGAAGAACATACTCAACAGAATACGGACATAGGatataataacaacaacaaTACAGACATACAGATGGGATTGGATACAGGTTTAGAGAACGTCATCGTTAAAACCGAGCAAAATTTGTATGATGATCTTATAGATATCAAAACTGAAAATGTTGTCAGTGAAAATGATAATTGCGATAATACCATGGATTCTGATGCAGCAAACTACGATTATTTGTCGGAGAGTACTTTAGTGCTAGACGCAGTACCGAGTTCTGACGAACAGACGTTTATGTCAACTGAAACACAGAATTCTGATATGGACACTGAAAACTTAGacctaaaaaaagaacaaaatgcGAAAGCCGCTAATGTAGTACGTATAAAGGAGAAAATGACGTGTAAAAGAGATAATAAGTTGCATGACAAATTGAAATTTGAGTCAACATCGGAAAACTCTGCAGTATCTGACGAATTGTTCAAATATGAGGAAATACCAAAACGCGAATCTGGTATGGAAACAAAAGGAGCTGATTGTTCTTCGGAATCAAACAGTGACAATGAAGAAAATAGTTTATTGGTTaaacgtgaaggaaaacatgattcagttaaattgaaaaaaagcaCCGAAACAAACGCATATTCCTGTGATATATGCAATTATAAATGCAAGCTAAAAATCAGTTTAACCTTTCACATGAAGTCGCATGAAAGCAAGAAGTTATTTTCATGTGAAATATGCGATTACAAAAGTACATTGAGACACACTTTGAATGTACACATGAGAACCCACACAAATGAAACGCCTTTTGCCTGTGACATATgcaaatctaaatttaaaactacAGATGAGCTAGCCCTACACTCGAGGTCACACGCAAGCGAAATGTCTTTTTCTTGTGCAATCTGCGATTATAAATGTAAACTGCGACACACTTTGAACGTGCACATGTCGAAACACAAAAGCGAAACGCACCTCGTATGCGGCATATGCGGAACTAAATTTCAATTAAGAAGTAATTTAATCAGACATATGAAAAGTCACTCACGTGAGAAACCGTTCGCCTGTGATCTTTGCGAATATAAGTCTGTGCACAGATACAATTTGAAGATACACCAAGCTGTTCACGCAAAATCCTACGCGTGTGGGCGATGCCAGCAAAAGTTTGCACATAAAAAATCTCTTGAGCGACATAATATGTGGATTCACATggagaaaaaatatattgagtGCGAGCTATGTGATTTTAAATGTCAAGACAGAACCGACTTGAGAATGCACATGAGATGTCACGATGAATCTCCGTTAGCACAGAAACACAAAAGAGCTTACGCATGCCACCTGTGCGAGTCGAAATTCAAGCAGAGTCACCATCTTGATAGGCACTTGAAAATGCACTCTGGTGACAAACCATTTAAATGTACTTCATGCAAACTTCAGTTCACGCAGAAAGTCACTTTGAAGAAACACATGTATTTGCATACCGGCGTGAAACCGTTTTCATGTGAGACGTGCCCGTATAAATGCACATCCAACGTTGATCTGGTGAAGCACATGAGAACTCATACAGGCGAAAAGCCGTATGCATGCACGTACTGCGACTATAGAAGCACTACTTCCTATTCTTTGCTCACCCACACGAGAGGCCACACGGGGGAGAAGCCGTTCGCATGTAATATATGCCACTACAAATGTTCGAGCACTAGTCAGTTAGTGAGGCACATGAGAACTCACACTGGTGAGAAACGTTTTTCGTGTGGTTTGTGCGATTATAAGTGCACGCGGCACTGCAACCTACAGACGCACATTAGGGTGCACACTGGCGACATGTTTTCGTGTGATTACTGTGATTATAAGACTGCGCACAAAAGTTGCCTCCTGGTTCACATTAGAAGACACATGAAACTCATCGAAGACAGCCAAGCAGGAGAAAGTCAagctaataaatga
Protein Sequence: MHCCVPFCKTNTELDCGSEAITFHELPSEERLRAAWLSALGTEDTLLPDSAMVCSQHFLDDEMYETGSGLRQIYAGAIPSTVQVCMMCLDAHSKLFQMKKYKLEGAYENFVGLPLCNEGNLKQTLCILCAQRLMNFTKFRDKSLRARALMMDLVEKHKLITLQHMELMDNLKNELKPNIVKTVLKPDHCDLYITHSDEDKQTENSTECNFVGEVAVKNEVSHDTMSTDNQTQHNQVKKDNGITANSFNPNIVILKEEYMSDDSITVEPKQFNDPLLVKPSTSKELVESLAQIKYEITFECNTCFVEFADEDTYNNHMAMHIQNQNPDRDSTAEDYAQGSVDPLPWRLVTNVTSLHGVSTTETIQPGIEKVCTICLDTDSKLYVMSEYKMDKAYEYLTGLSLSNMEHAKFLCFECVHRLLSFSKFRCKSLRARLVMENLLKNYTEITLQHIKSIDRNLYRLNSGMVKILLEPDNCDLYIDNSDVDKLVESATEYINDRAVEEMINDEVLDSMMVGEEHTQQNTDIGYNNNNNTDIQMGLDTGLENVIVKTEQNLYDDLIDIKTENVVSENDNCDNTMDSDAANYDYLSESTLVLDAVPSSDEQTFMSTETQNSDMDTENLDLKKEQNAKAANVVRIKEKMTCKRDNKLHDKLKFESTSENSAVSDELFKYEEIPKRESGMETKGADCSSESNSDNEENSLLVKREGKHDSVKLKKSTETNAYSCDICNYKCKLKISLTFHMKSHESKKLFSCEICDYKSTLRHTLNVHMRTHTNETPFACDICKSKFKTTDELALHSRSHASEMSFSCAICDYKCKLRHTLNVHMSKHKSETHLVCGICGTKFQLRSNLIRHMKSHSREKPFACDLCEYKSVHRYNLKIHQAVHAKSYACGRCQQKFAHKKSLERHNMWIHMEKKYIECELCDFKCQDRTDLRMHMRCHDESPLAQKHKRAYACHLCESKFKQSHHLDRHLKMHSGDKPFKCTSCKLQFTQKVTLKKHMYLHTGVKPFSCETCPYKCTSNVDLVKHMRTHTGEKPYACTYCDYRSTTSYSLLTHTRGHTGEKPFACNICHYKCSSTSQLVRHMRTHTGEKRFSCGLCDYKCTRHCNLQTHIRVHTGDMFSCDYCDYKTAHKSCLLVHIRRHMKLIEDSQAGESQANK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -