Paeg002545.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pararge aegeria
Gene Symbol
-
Assembly
GCA_905163445.1
Location
NC:6865777-6875949[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 24 0.078 3.2 8.0 0.7 1 23 86 108 86 108 0.97
2 24 0.038 1.6 9.0 3.0 1 23 160 182 160 182 0.96
3 24 5.6 2.3e+02 2.2 0.3 2 23 206 228 205 228 0.92
4 24 0.0057 0.23 11.6 3.3 3 23 252 272 251 272 0.98
5 24 0.00043 0.018 15.1 3.4 3 23 278 298 277 298 0.97
6 24 0.34 14 6.0 1.1 1 13 305 317 305 319 0.89
7 24 0.049 2 8.6 0.2 2 23 427 448 426 448 0.95
8 24 0.6 25 5.2 7.2 1 23 470 492 470 492 0.95
9 24 0.0026 0.11 12.6 0.6 1 23 496 518 496 518 0.97
10 24 0.0052 0.21 11.7 0.2 1 23 523 546 523 546 0.95
11 24 0.0001 0.0042 17.1 1.0 1 23 552 575 552 575 0.98
12 24 0.01 0.41 10.8 2.3 1 23 582 604 582 605 0.95
13 24 0.0017 0.071 13.2 2.0 1 23 611 633 611 633 0.95
14 24 1.5e-06 6.3e-05 22.8 1.0 1 23 639 661 639 661 0.99
15 24 0.099 4.1 7.7 1.4 1 13 667 679 667 682 0.90
16 24 0.0092 0.38 10.9 0.7 1 23 734 756 734 756 0.90
17 24 0.53 22 5.4 0.3 2 23 785 807 784 807 0.91
18 24 5.3 2.2e+02 2.2 0.3 1 23 941 964 941 964 0.90
19 24 1.6 67 3.8 0.0 1 23 1035 1057 1035 1057 0.95
20 24 0.00054 0.022 14.8 0.2 1 23 1061 1083 1061 1083 0.98
21 24 8.5e-05 0.0035 17.3 0.4 2 23 1189 1211 1189 1211 0.97
22 24 0.0036 0.15 12.2 0.4 1 23 1218 1241 1218 1241 0.98
23 24 0.0096 0.39 10.9 4.6 2 23 1248 1269 1247 1269 0.97
24 24 1.6e-07 6.7e-06 25.9 0.9 1 23 1275 1297 1275 1297 0.99

Sequence Information

Coding Sequence
ATGCGTCGGAGACGTCGTGCCAACAATGAACTACCCGAAGAATCAGAGAAACGCATAGACAAAACAATGATGCGCAAAAACGCGATGACTATACTCGAATGTTCTACAGCGTGGGCCTTTCGACCGGATGACGAGGATAGAAGAACAATAGCGATTAAATGGAAAAAGAAACCACGTATAATAGGTGAAAAGGCTAACGCTGCCCTAATTCTAGAATGTTCAAACGCTGTTGCGTTTAGGTGGATGCGTGGAAAGTTTATGTGCGCTTACTGCCCCAAGTTATGCGCAGATCTCAACGAAGTGCGATCCCATACAAAAATTCATGATAAACTAGATATTGTTGAAAAACCAACCGCTCggaCGGTCAAGAAATATGTATGGAAACGGCGACGGAGGGTGTATAACGATCATAGACATAATGCCGCAATTATTATAGAGCACTCTAATGTATGCCCCTTCCGATGGAAACGCGGTGCGTTCGCTTGTTCCCACTGTCCAAGGACATTCGGACATTTCGACGATGTTTACAATCATACGCAAGAACATCCTGACCGATTAGATGCTATGCACTACGCTCGACCTTACGACACTGTCAAAGTAGAAGTAACTGATCTAAAATGTGCTATTTGCTACGCTAAAATGAACGATTTGATCCACCTAAAGGACCATCTGTTAAATATTCACCAACAGCCCATAGCCAAAGATTTGGACATAGGAGTGACTCCGTTCATTTTGCGAAACAAAGAAATGCTTTGCGCTCATTGCTCGAAGCGTTTCTCTCTATTTTCCAAGCTAAACAGTCACATGAACGAGCACTATCCGAATAACATTTGCTTCCACTGTGGAAAATCCTTCACCGCTGCCCATAGATTAAAAGCGCATCAACTTACCCACGAATCCAATGAACAAGCTCATAAATGTACTAAATGCGACGAGGTTTTTGAGACACgaAGGAAATCAGCAGTCGTTGAAATAAAACAGGAAACGGAAATAATTACTGAGAACAATGCTCTGCTGGGTGTTGTGAAACCTATAGAAATTGATCAAAGGGCAGAGGGTAATGCCCGACGAGCGGCATTTAGGAAGAATATAAAGATAATCATGACCTCGAGCACTGCCTGCCCATTTAAGTACAGGAAAGGCACTTACCTATGTTTCTTTTGTAAAAGTACGTTTCTGGAACCGGAAAAGCTAAGAGAGCACACGCGGGCAACACATGTAGATTTAATGTTCAAACTCAAAAAATATGAGCCACTGAAAATAGATTTTGCAACGACGACTTGCCGCTTGTGCGGAATACAAATAAACGATTATTCAACGTTGAAAGCTCATTTGAATGATCATGGGAAGGAGCTGGATGACACATACGGAGAATCCGTGTTGCCGTACAAGTTGAGCCGAGACGAGCACTGCTGCCAGATGTGCGGTAAGCGATACGAAATGTTCCTGAGCCTCCACAAACACATGAACGACCACTACGAGCATTTTATTTGCGAAACGTGCGGCAAAGCTTTTGTGACTATGCAGCGGATGTTGAACCATTCCCGTACGCACGAGCGCAGGGATTTCCCCTGCAAGCGTTGCGGGGAGACTCTGACGTCATACGCTAGTCTGTACGCTCACACAGCGAAGGTCCACCGTTTAAACAAGAGATACAAATGTCCGATTTGTGATGAAAAGTTTGCGTCGTACAAATATAGAATGAAGCATCTGAATACGGTTCATGGGGAAAAAACTGCGCTATTCCCTTGCCCGTCGTGTCCAAAAGTGTTCGACCTCTGTAGTCGTCGCACCGCCCATATACGATCTCATCATTTGCAAGAGAGAAACCACAGTTGCTCAGTTTGCGGAATGAAGTTCTTCAGTAATTACGAGTTACAAGAACATAGTATTAAGCACGCAGGTGCTAGAATATATCAGTGTGACGTGTGCAAGAAATCCTACGCCAGACTAAAGACTTTGCGTGAACACATGAGGATCCATAATAATGATAGAAGATTCGTTTGTCCAGTATGTGGACAGTCTTTCATTCAGAAGTGCAGTCAAATTGAGGACGATAATGGCGTAGAGACTTTAAAAATGGATATATGCGCAGAAAACGAAAGAAAGCTAAATGAGTCTACAAAAGTCAAGAAGCGGAATGTCGCCGTACTGCTAGAAAACACAGGGATTTGTCCATTTAGATGGATGAAGAatttgtttatatgcatttactGCGACAGACAGTTTACTGATCCGGCGCTTTTAAGACATCACAATTTAGAGCACGATAGGCAAACGTCAGCACAAATAAAAGCAGCTTTACCTAAGCTGAAAAAATACGAATTAGTTAAGGTTGATATATCAGATTTGACTTGCAAACTGTGTGCCAAAGAAGCTAATAACTTTGAGGATCTAAAGCAACATTTGATAGACAAGCATAACTTTAGCGGTGATCTCAAAATAGAAGATGGTGTACTtccatttaaaataagcACGGACTCTTTACCGACGGATAGACCGACGCCAGCTAAACGAATAGTTCCTCTATTTCAAGTGGCCTACGATCGGAGCCTTTGTAAACCTTTGGGAACTGTGACTGCCTTCAGAAAGTTAAGACTAAAAGACCGGATCAACACACCatctcctcttacaatgagagATTATACGCCATCGCGGAGTCCATCGCCAGTGTCTATTACTCAAAGGAATCCATCTCCTGTGGAAGTTCCACGAACCGTGAAAGTTTTAGCAGCCAAAAAGCACTCAGATTATCGACAGAACGCTTTAACGGTTTTTGAATTCTCCACAGTTTATCCATTTGTGTATGGAAATAACAAATTCAAATGTTTCGTTTGCGCTGAACCTTTTTTAGAAACATTACTTTTAAGGCAACATATGAATGAAACCCATACGTTTGCACCTCTGAAACGTTTAGTTAACAATAGAAGGGAAAACGTCCTCAAAGTAGATGTGGGTGAGCTAGAATGCAAACTATGCTCAGTGAAGCCCAAAGACTTATTACAGCTTAAGTATCATCTAAAAGAAGATCACCAGAAACCTATAGACCCCGATTTACAAGACAATATGATACCGTTTAAATTAGAGGAAGAAGATGGTGCATATAAGTGTGTTATATGTGAAGGAGTGTTTATAAAAGTTCGGATTTTAGTTATACACATGAGCGTGCATTTCAGTAATTACAGCTGTGAGATTTGTGGATCAGGATTCATGACATTGCGGTTGTTGAAGAAGCATCTAGAAGTGCATGAGACCGGGAATTTCCCATGCGACAGATgcGTCATCATAGAGACTGATTCATCGATAGTCATAAAGGATGATGATGGAAGTGAGATCAAACTCAAACTACTCAAGAAACCCATTAAAATTGAAGATCTAATATGTGAATACGAAGATAAAAAGGAAACACCAAATCAAGACTTGATTTTAAACGATATAGGCGGGATGAAAcgaaaaaagttcaaaaaacgTAATGTAACTGGATCAGTGaaacataatatagaaaaaattaacgctgtttcgtatttaaaagaACCATTGGCCCTTGATGAGATGTGTCCCAGGACTTGCCCAATTTGTCCCGAGAGATTTAACTCGAATTACCAAAGAACGAAACACTTGCGAATTGTCCATAACCAAACCTCGGGGCTGTTTAAATGCGAAACCTGTGCAAGGGAGTACGACTTGAAATATCAGCTACTTATACACATAAGATCTGTACACATGCAAGAGAGGAATCAAGAATGTGGGATCTGCCATTCAAGGTTCTTCTCAAAGTACTGTTTATCAAGGCACATGATGATACATACAGGAGAGAAGAATTTTAAGTGCGAGGTCTGTGGGAAAGCTTACGCAAGGAGGAAGAATTTAAAGGAGCATATGAAGTCTCACGAGATCGGCCAAGTGTGCTCCGTGTGCTGTCTGGACTGCGGGGATCATGCTTCGTTGGTCGTACATTTGAGTCGTTCACATGGACTAGCGTAA
Protein Sequence
MRRRRRANNELPEESEKRIDKTMMRKNAMTILECSTAWAFRPDDEDRRTIAIKWKKKPRIIGEKANAALILECSNAVAFRWMRGKFMCAYCPKLCADLNEVRSHTKIHDKLDIVEKPTARTVKKYVWKRRRRVYNDHRHNAAIIIEHSNVCPFRWKRGAFACSHCPRTFGHFDDVYNHTQEHPDRLDAMHYARPYDTVKVEVTDLKCAICYAKMNDLIHLKDHLLNIHQQPIAKDLDIGVTPFILRNKEMLCAHCSKRFSLFSKLNSHMNEHYPNNICFHCGKSFTAAHRLKAHQLTHESNEQAHKCTKCDEVFETRRKSAVVEIKQETEIITENNALLGVVKPIEIDQRAEGNARRAAFRKNIKIIMTSSTACPFKYRKGTYLCFFCKSTFLEPEKLREHTRATHVDLMFKLKKYEPLKIDFATTTCRLCGIQINDYSTLKAHLNDHGKELDDTYGESVLPYKLSRDEHCCQMCGKRYEMFLSLHKHMNDHYEHFICETCGKAFVTMQRMLNHSRTHERRDFPCKRCGETLTSYASLYAHTAKVHRLNKRYKCPICDEKFASYKYRMKHLNTVHGEKTALFPCPSCPKVFDLCSRRTAHIRSHHLQERNHSCSVCGMKFFSNYELQEHSIKHAGARIYQCDVCKKSYARLKTLREHMRIHNNDRRFVCPVCGQSFIQKCSQIEDDNGVETLKMDICAENERKLNESTKVKKRNVAVLLENTGICPFRWMKNLFICIYCDRQFTDPALLRHHNLEHDRQTSAQIKAALPKLKKYELVKVDISDLTCKLCAKEANNFEDLKQHLIDKHNFSGDLKIEDGVLPFKISTDSLPTDRPTPAKRIVPLFQVAYDRSLCKPLGTVTAFRKLRLKDRINTPSPLTMRDYTPSRSPSPVSITQRNPSPVEVPRTVKVLAAKKHSDYRQNALTVFEFSTVYPFVYGNNKFKCFVCAEPFLETLLLRQHMNETHTFAPLKRLVNNRRENVLKVDVGELECKLCSVKPKDLLQLKYHLKEDHQKPIDPDLQDNMIPFKLEEEDGAYKCVICEGVFIKVRILVIHMSVHFSNYSCEICGSGFMTLRLLKKHLEVHETGNFPCDRCVIIETDSSIVIKDDDGSEIKLKLLKKPIKIEDLICEYEDKKETPNQDLILNDIGGMKRKKFKKRNVTGSVKHNIEKINAVSYLKEPLALDEMCPRTCPICPERFNSNYQRTKHLRIVHNQTSGLFKCETCAREYDLKYQLLIHIRSVHMQERNQECGICHSRFFSKYCLSRHMMIHTGEKNFKCEVCGKAYARRKNLKEHMKSHEIGQVCSVCCLDCGDHASLVVHLSRSHGLA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-