Paeg002067.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pararge aegeria
Gene Symbol
-
Assembly
GCA_905163445.1
Location
NC:561243-569171[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 0.0003 0.012 15.6 3.5 1 23 57 79 57 79 0.98
2 22 9.1 3.7e+02 1.5 4.1 1 20 85 104 85 107 0.93
3 22 0.001 0.041 13.9 3.4 1 23 113 135 113 135 0.97
4 22 3.2e-05 0.0013 18.7 2.4 1 23 141 163 141 163 0.98
5 22 0.00021 0.0084 16.1 1.8 1 23 169 191 169 191 0.99
6 22 0.00038 0.016 15.3 0.3 1 23 197 219 197 219 0.96
7 22 0.00049 0.02 14.9 3.3 1 23 225 247 225 247 0.98
8 22 0.0032 0.13 12.3 3.0 1 23 253 275 253 275 0.98
9 22 0.0018 0.075 13.1 6.9 3 23 283 303 281 303 0.99
10 22 0.0001 0.0042 17.1 6.6 1 23 309 331 309 331 0.99
11 22 1.9e-05 0.00076 19.4 1.8 1 23 337 359 337 359 0.98
12 22 0.9 37 4.7 0.9 1 23 378 400 378 400 0.93
13 22 0.039 1.6 8.9 0.1 1 23 416 438 416 438 0.98
14 22 0.22 8.9 6.6 1.7 1 21 442 462 442 463 0.94
15 22 5.6e-05 0.0023 17.9 0.9 1 23 582 604 582 604 0.98
16 22 0.5 21 5.5 5.8 1 23 614 636 614 636 0.98
17 22 0.0084 0.34 11.0 2.6 1 23 644 666 644 666 0.98
18 22 0.0019 0.079 13.1 4.5 1 22 672 693 672 693 0.94
19 22 0.0033 0.13 12.3 2.0 1 23 700 722 700 722 0.97
20 22 0.031 1.3 9.3 0.5 1 20 728 747 728 749 0.92
21 22 0.0043 0.18 11.9 4.5 1 23 756 778 756 778 0.99
22 22 0.01 0.43 10.7 5.4 1 23 784 806 784 806 0.99

Sequence Information

Coding Sequence
ATGGATCAAGAAAATGATAAAACTGTTCTCGTCGAATGCAATAATACATATGAATCTACTGCGAATACTACAGGTGGAACTGAGTGCAACAAATTTAAAATCGCAGCAAACGAAAGCTATATAGCCTCTTGTGAAACATATGATGATTCTTTTCAAGGCAAGAAATACTACTCGTGTACATACTGCCCTTACCGCTGCCCGAAGAAGAGTAACTTCATCCTACATACAAGGGTCCATACTGGAGAGAAGCCGTTCTCATGTAAACTCTGTGAATACAGatGCTTAAGCCAAGCTAGACTAGCTAGACACATGATCTGCCACAGCGGTGAGAAACCTTTCTCTTGCACCTACTGTGACTTCAAATGTACTCTGAAGACCAATCTGCAAGTTCATGTGCGAGCACACACAGGGGAAAAACCGTATGCTTGCAAGCAATGCGATTACAAGTGTGCACAGAGCAGCACTTTGGTCTCACACATGAGGTCTCACACCGGAGAGAGACCTTATACATGCAACGTCTGTGaatacaaaagtgcttataagagCCATCTAGTGGGCCACATGAGAAGTCACACCGGAGAGAAACCGTACCAGTGCACGATTTGCGACTACAGATGCGCGATCAGCAGTGCATTGACCATACACATGGTTGGCCATAACGATGAGAAAAAGTACGTTTGCTCGTTCTGCCAGTATAAGTGTAAACGCAAATCAGAAATTAACGCTCATTTACGAATCCACACCGGAGAGAAACCGTTTTCCTGCAGCCTCTGTAAATTCTCTTGTGCGAGGAGCAACGTTTTGGTGAATCACATGAAGACTCATTCCGGGGAGAAGCCCTTCTGGTGCCACCATTGCCAGTATAAATGCGTGCAAAGGGGTACGCTCATCAACCACATGAGGACCCATACGGGGGAGAAACcgtataaatgtaaattatgcAAATTCAGATGCTCGAAAAGTTCTAATCTAAAGTCTCATATCAGGAGTCACACCGGCGAGAAACCATTTGAATGCAACGTTTGCGATTATAAAACAGCAACTAAAGCCCATTTGAACAAACACGTTCAGACTCATGCGAGGAAATCTAAATTAGTGAATATCTCCAAAACCAGTAACAGTGTTAAAGCCTATGAGTGTAGTGTTTGTGATTTCAAAACGAAGAAAAAAGTGATTTGGGATAAACATTTAAGTACTCATGTGGAAAATTTTGTATCCTATGCGAGTACTCATCTGCAAAAAACCTATGAATGTAGTGCGTGCGGTTTTAAAGCGAATGATGAAAGCGCTTTAGAACAGCATAGCAAGAGTCATTTGAAAGTTTACACTTGTGATGTTTGCTATGAAGCCTGTCCAGATGAGTGCAGCCTGGCTAAGCATGTGTGCATTAAAAGCGATGTACACTCTCACTCATGTAaaagtgaaattaataatactgtGATCGAATCGCATTTTGTTGAAATAAAGCAAGAGTTACCCGACATCACGGAAGAGGACCATAATATTGAAACACCAAAAATCTCTCATATCAATGTGTTTAAACAAGAGTTAGACGTTAGCTATGAAATGGATGATATGAGTGACAGTGTTGATAAACCAACAACTGTAACATATATCAGCTTTACACCTGAGTGCACTAATCCGACGGATGAATGGCCGTGGATCAATACAACAGATGTCAAACCTGACATAAGTTTGATTGAAATAGCTCAAAACCCTGTACCCGACACAAATGTTGTACCATATTCATGTGACATATGTCAGGCGAAATATGCGCGTAGCATCGATTTGTGCATTCACATGAGATCGCACTCTGAGTCCGGGCTCTGCAAGAAGATTTACTGTTGTGAGCATTGCTTGTATCAAAGCGAATTTAGGCATGCTTTAGCGAAACACATGATAACACACATAGCTGACGATAAGAATCTTTACTTTTGCCCATTATGCAGTTACAAATCCGGGCATAAACGGTATTTGTTAGATCACATGATGACTCACACGAGTCAGAAACCGTTCTCATGTCAGCACTGCGGCTTAAGATTCGAGAACCGAgcgcatcttagtacccatacgtGTACTTACACTGGTGGGAAGTCGTATGCTTGCGTGTATTGTGAGTACAGGTGCGCGCTGTTAAGTGATCTCAAAAAACACATGTATAGGCACTCGGGTCACAAACCTTACTTGTGTACGAAATGCAATTACAAATGTGGACGTCCTGGTGAACTTAAATTACATACAATAGCTAACACTTTAGAGAAGTCTTACACGTGTGAGCTATGTGATTTTACAAGTTCGCATGCTTGCAGTTTGATTAATCACACAAAAACCCACAATGGTGAGAGGCGTTATTCGTGTAAGCTTTGCGGCTTCAAGTGTTCATTAAGAAAAGTTCTAAGAAAGCACACAAGGACACACATTTAG
Protein Sequence
MDQENDKTVLVECNNTYESTANTTGGTECNKFKIAANESYIASCETYDDSFQGKKYYSCTYCPYRCPKKSNFILHTRVHTGEKPFSCKLCEYRCLSQARLARHMICHSGEKPFSCTYCDFKCTLKTNLQVHVRAHTGEKPYACKQCDYKCAQSSTLVSHMRSHTGERPYTCNVCEYKSAYKSHLVGHMRSHTGEKPYQCTICDYRCAISSALTIHMVGHNDEKKYVCSFCQYKCKRKSEINAHLRIHTGEKPFSCSLCKFSCARSNVLVNHMKTHSGEKPFWCHHCQYKCVQRGTLINHMRTHTGEKPYKCKLCKFRCSKSSNLKSHIRSHTGEKPFECNVCDYKTATKAHLNKHVQTHARKSKLVNISKTSNSVKAYECSVCDFKTKKKVIWDKHLSTHVENFVSYASTHLQKTYECSACGFKANDESALEQHSKSHLKVYTCDVCYEACPDECSLAKHVCIKSDVHSHSCKSEINNTVIESHFVEIKQELPDITEEDHNIETPKISHINVFKQELDVSYEMDDMSDSVDKPTTVTYISFTPECTNPTDEWPWINTTDVKPDISLIEIAQNPVPDTNVVPYSCDICQAKYARSIDLCIHMRSHSESGLCKKIYCCEHCLYQSEFRHALAKHMITHIADDKNLYFCPLCSYKSGHKRYLLDHMMTHTSQKPFSCQHCGLRFENRAHLSTHTCTYTGGKSYACVYCEYRCALLSDLKKHMYRHSGHKPYLCTKCNYKCGRPGELKLHTIANTLEKSYTCELCDFTSSHACSLINHTKTHNGERRYSCKLCGFKCSLRKVLRKHTRTHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-