Paeg000853.1
Basic Information
- Insect
- Pararge aegeria
- Gene Symbol
- -
- Assembly
- GCA_905163445.1
- Location
- NC:14467831-14480408[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.01 0.43 10.7 1.4 3 23 211 232 210 232 0.94 2 22 0.035 1.4 9.1 0.6 1 22 609 630 609 630 0.95 3 22 5 2.1e+02 2.3 0.3 1 22 672 693 672 695 0.82 4 22 2.1 84 3.5 0.4 1 13 704 716 704 724 0.86 5 22 0.005 0.2 11.8 0.1 3 23 775 796 773 796 0.95 6 22 0.0042 0.17 12.0 4.2 1 23 802 825 802 825 0.95 7 22 0.094 3.8 7.7 0.0 1 23 851 874 851 874 0.90 8 22 0.014 0.58 10.3 3.4 1 23 879 901 879 901 0.97 9 22 0.018 0.72 10.0 0.2 1 23 907 930 907 930 0.94 10 22 5.6e-05 0.0023 17.9 1.3 1 23 942 964 942 964 0.98 11 22 0.0011 0.044 13.8 4.0 1 23 1007 1030 1007 1030 0.96 12 22 0.0021 0.084 13.0 1.7 1 23 1090 1113 1090 1113 0.96 13 22 0.00084 0.034 14.2 2.2 2 23 1135 1157 1134 1157 0.95 14 22 0.0065 0.27 11.4 0.4 2 23 1163 1185 1162 1185 0.96 15 22 0.0074 0.3 11.2 0.2 1 21 1229 1249 1229 1250 0.95 16 22 0.00092 0.038 14.1 0.6 1 23 1260 1282 1260 1282 0.93 17 22 6.6e-05 0.0027 17.7 0.3 2 23 1375 1397 1375 1397 0.93 18 22 2.5e-07 1e-05 25.3 1.4 3 23 1404 1424 1403 1424 0.98 19 22 0.19 7.7 6.8 0.9 1 23 1442 1464 1442 1465 0.93 20 22 0.045 1.9 8.7 0.0 1 23 1486 1508 1486 1508 0.98 21 22 0.021 0.84 9.8 0.6 1 23 1514 1537 1514 1537 0.95 22 22 0.00022 0.0092 16.0 0.6 1 23 1545 1568 1545 1568 0.96
Sequence Information
- Coding Sequence
- atgaATGTGAATTATGACCGTGTTTGTAGACTGTGCTTGTCATCTCGATGTGAATTACTACCGATATTtcctaccaccagttcggatgAGTCGGATCCTCTTGTCCTTGCTTTGAAAATCAAAGATTGCGTGTCAGTACAGATAAGCGAGAATGACGACCTGCCTACCAATGTCTGCAGAAAATGCATGGACAATGTCAACAACTGGCACATTTTTAAAGCTGTGTGTGAAAGGAGCCAAAACAAATTACTGTCTCTGACTAACAAGGACAGCAGCCAACTAGAAGAGTTGAATATAAAAAGTGAACCTCAATCTGATGGAGCTTATGATGATGGAGTGGTCATTGATGGATCATACCCTGAGAATGAGAATGCTGGCCCATCAAATAAAGTGCAGCCAGAGGGTCCCCCAATTTTGGCTTCATTGGGACTTACACCAAGAAGTGATAAGGGCATGGATAGTGAAAAGGACGAGGATTATGAAGAGGAAGAAGATCGAGAAGAAATGGCAGAGCCAGAACAGTCTTATAGAAATATGCCCCACATGCCTGAAGTCTCCATCACTGTCATGCGTCCGACTGGCGAAACTCTTCACGCTCGGCAAGGTATACAACAGATAGCTTCTAAGGATTGTCTCGTTTGCGGACGCTCATACAGATATTCTCATAATGCACGCAGGCACGAACTGAGTTCTCATGGTTTCGATAGATACACTAACAAAACCACAGCTAAGAAATCAAATCACAATCATATGCAACCTAAATTTAGGCCTAATCCTTTTAATCCAAAAGCACGTTTGATGCCGAATCCAATCAGCCACAAAATGCAATACATACCAAAACCGGTTCCTACGAAAATGATGCCGCAAAAAATTGTGGCACCACCAAAACCAATTCCAATCAGAACTGCCAAAGCCCCCCAGAACAACTTACCATACCCCCTTCGTATTAAAGCTTTAAAAGACttgcaaataaagaaaaaggaaCCGcagatattaaaaacattacttaCTTCTAAACCGGAAGTTTTAATATCTGAACCTGAAATACTCCACTCAGGACCTGAAAGTCCAGAGACGTTGATTTCGGAACCTGAAATAGCATCGTTTCAAGTGGAGACTATTTTGTCAGAACCGGGGGGCTTTATTAATCAACCGCATGACGATGATGAGgtagatgatgataataatcaaGATCAAAATTATGATACTCTTGACATGGAATCTGATAATGAAATCGAAATTGCACGTCAGCATGAAAATAACGTTGATATTGAACAAAACCATATTGAAAATGATGCTGAGGAAAACCCACAAGAAGAAATCAATGTGGAAGACGATCATGAAAAAGAACATATGGAGGATAATGGAGACAGTCAAGACATGAGTGTTGAGAATAATATAGATGCCGAGAATGATGAGAACGCTAAagaacatgatgatgataatgttgacAAGGTTAATAACGACCAAGATGCAAATCATGAAGATattgacgatgacgatgatctTCCTCCATTGAGTATTGCTCCTGTGGTTGAAATTAATGAAGATTTACAGGGTAACTCATACAATAGTGAAGGAAATGATGAAGAAGACCTAGACGAAACTGTTGATCCAAATGACACTATTGATGGTGATGAAACAGGAAAAGAACTAGATCCTGATAAAGTGTATGTTACCAAAACGCAAAGAGATTTCATTCTTAAATACCGTAATATTATTGAACAAATCAACACAAAGCTTTGTCTCTGTTGTAATAAAGAACACCCTCGCAGAAAAGCTGTCATACAACATTTACAGAAGAATGGTCACAAAGTTCCTAAACATACCTGCTATAATTGTGTAGTTACATTCACTCACATTGGTGCTTTGCTCAGCCACATGAGATCTAATACTTGTACAGATCTAtggaaaataatttacaatgaaAATGGAATTACTGATGATATAGTACTGGAAGATGAGCCAAAAGATACGAAAGTTCAATATAAAGATATCCTAAATGCAAGATCTTATGCATGCAAATTGTGTCCAGCCAAATTTCAGTTGAAGCAGTTTATAATGAAGCATGTTCTAGATGTTCATGAAGATGGCCAATCTCGAGTCCCTCATTCCTGCGTTCATTGCGGTTTACGAttcaaggaaaaaaatattggcAAGAAGCACATTCGCAACGGAGATTGTACAGTGTATATCGCGTGCGATTTATGTTCTGAAAAATTCCTGAACATGCAAGACTTTAACGAACACGCTGTGGCCGTTCACGCTGGTAATTTTGACCCTGATAGTCAGAGCAAGTGTGTCGACGGTAGACCAACAGATTGCCCCATATGTGGAAAAAAGAACAGCAGCTATCCCAATTTGGTTAAACATTTGCGAGCAATACATAATGAGGAGAAACCTCACCATTGCCAGCACTGCGATACCAAATACGAGCAAGCGGGCGAATTGAACAAGCACATTTATATGGAGCATTCCGATAGAATGCTAGGCATGGCACCCACAGAGCCTGATATGTCTCTCGTGAAGGAGGAGGCCGAGGAGTACCATTACTCGTGTACAGAATGCAACGCCATTTTCGAGACTGTCGATGCTTGGACTGACCACCAGGTCGCTGAACACAATCAGGTCGCTCACCACTGTGACCAGTGCGAAAAGAAATTCTTACGCCCATCGGAACTAGCTGAACACAAAAATACACATCTCCGAGTCAAATACTATCCGTGTAACATGTGTTCTAACTCATATAGCACACCGCAAAAACTATCTGAGCACGCCCAACAAGTCCATCCTGGTGCCCCCACGCGCAATTTTGATACCGAATTTTACTGCGATATATGCGTGCGATCGTTCAAGAGTCGCCAGGCGTACTCTAATCATATGCGTATTCATTCCAAAGTGCCGACAACTAACCGGAAACCTGGCGAACCGAAGGGGTTTTCACCTCAGATAATCGGAAAGCCTATTCGCCAATTTTCTATGCAACCAGGATTTAGTCCTTTTGTACCGAATGCCCCTTACTGCTGTGACATTTGTGGTAAAGGATTCATGCATAAGAAAAACATATGGAAGCACAAGAAGGTTCTTCATGCAGATGTACTTAATGACAGAAACGATAGTGAGGAAAATACTATGCACGCATCTACAGAAGAAGATGATTACAATGTGGATGAAAATGGCGTCATCTTATCGACTCCgcaattcaacagttttaattttacaaacatttcCAATAGCTCGCAACAGACATCACAAGATGCCCTCCCATACTCCTGTGAATTGTGTTATAAACGCTTTCCGCTTAAAACCAGTTTGTGGAAACACAAACGAGCTAAACACGGTATTGTTAATACAACTGGTCCGGATGGCCAAGTGATACCGACAACGGCAGAAGGGCGGTCAAGTTGCACAATCTGCAAAATTACATTTTCAGATAAGAAATCTTATTACCGTCACAGAAAAAACATTCACAAGTCTTCTGTTCAAATGTGCAAAATTTGTGGGAAACCACTCAACTCGACGCAAGAACTTTACGAGCATTTAAAATCGACACACGCTCGCGAACTGTTGGGCTATGATGCGAATCAAGGAACGAGTAAATCTCAAGAAATGACGCAAGAGGCGGATGCCGACTACGAAGCAGAGCAGGATCTGGTCGATCCTACTGCTGAGTTCCAAGCGCGATATCCTTGTGATACCTGTGGTAAGCAGTTTGTTGGGTTATTGGCTTTGCAAAATCATCAATGTATCAATCAAATACAATCGCAGCCGCAAACCTTCGATTGCGAAATATGTCACAAGAGCTACACTTCGATCGCCGCTTTGAAGAGCCACCGTGGCTGGCATTTGAGGTCTCCTGACGGCAAGGCGGCTGCTAATAACACTGGACTTTGGATGCCCCAGAATAAAGTAACGACCAAAATAAGTAAACACGAGGTCATTGAAGCACCCCAACCACCAATAACTCGCTCGTCGCAACCGACGCCGGCGACAAGCGTAGCGAAAAGAAGACTCCCCCCAGAAGTGGAGGTGACTGTTGTCAATCCCAATAAGAAGTTGCGTTCCGATGATTCTATCGAAATGGATCAACAGAATAGCATGTCCGGTGGTACCGAAGATAGGTACTGTAATATTTGTGATAAAGAGTTCACCAAGCGAGCTGCATATCAACGTCACATGGATGAGGTGCATCAACCGAATTCTGTGTTTTGTCCAGTCTGCGATAAGAGTTTTACTCGCAAGTCTACTCTTCTAGTGCATATGAAAAAACATTACGAAGGCGGCGAAGGGTCGTCTAGTGTAGGCCAAATAGAAGATGACGGGCATGCGTGTGATGTTTGCGGCGATCAGTTTGATAGTGAGAAGGATTTGAGTTCACACAAGGCTGTGCACCACGCCGAGGACTCCGGTGAGTCTGATGACGAGGGGTCCACTTTGGTGCAGCAGCCCGGGGAGTTCACATGCAGCCAGTGCGGGGACGGCGTCGCCACCCCTCGCGACCTGATAGCCCACCGTACAATGCACGCGACACCCTCTAAATTCTTTTGTAACATTTGCAAGGTCTATTTCGCCCGCGCCCTTGACCTCTCCTCGCACACCAGGGCTAGGCACTCTGACaacgaaaaagtttttttcccCTGTGCAATGTGTGACCGATTTTATATGAACAAAAAGAGTTTGCAACGTCACATTGAAATGATGCACTGA
- Protein Sequence
- MNVNYDRVCRLCLSSRCELLPIFPTTSSDESDPLVLALKIKDCVSVQISENDDLPTNVCRKCMDNVNNWHIFKAVCERSQNKLLSLTNKDSSQLEELNIKSEPQSDGAYDDGVVIDGSYPENENAGPSNKVQPEGPPILASLGLTPRSDKGMDSEKDEDYEEEEDREEMAEPEQSYRNMPHMPEVSITVMRPTGETLHARQGIQQIASKDCLVCGRSYRYSHNARRHELSSHGFDRYTNKTTAKKSNHNHMQPKFRPNPFNPKARLMPNPISHKMQYIPKPVPTKMMPQKIVAPPKPIPIRTAKAPQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLISEPEILHSGPESPETLISEPEIASFQVETILSEPGGFINQPHDDDEVDDDNNQDQNYDTLDMESDNEIEIARQHENNVDIEQNHIENDAEENPQEEINVEDDHEKEHMEDNGDSQDMSVENNIDAENDENAKEHDDDNVDKVNNDQDANHEDIDDDDDLPPLSIAPVVEINEDLQGNSYNSEGNDEEDLDETVDPNDTIDGDETGKELDPDKVYVTKTQRDFILKYRNIIEQINTKLCLCCNKEHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFTHIGALLSHMRSNTCTDLWKIIYNENGITDDIVLEDEPKDTKVQYKDILNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVPHSCVHCGLRFKEKNIGKKHIRNGDCTVYIACDLCSEKFLNMQDFNEHAVAVHAGNFDPDSQSKCVDGRPTDCPICGKKNSSYPNLVKHLRAIHNEEKPHHCQHCDTKYEQAGELNKHIYMEHSDRMLGMAPTEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKYYPCNMCSNSYSTPQKLSEHAQQVHPGAPTRNFDTEFYCDICVRSFKSRQAYSNHMRIHSKVPTTNRKPGEPKGFSPQIIGKPIRQFSMQPGFSPFVPNAPYCCDICGKGFMHKKNIWKHKKVLHADVLNDRNDSEENTMHASTEEDDYNVDENGVILSTPQFNSFNFTNISNSSQQTSQDALPYSCELCYKRFPLKTSLWKHKRAKHGIVNTTGPDGQVIPTTAEGRSSCTICKITFSDKKSYYRHRKNIHKSSVQMCKICGKPLNSTQELYEHLKSTHARELLGYDANQGTSKSQEMTQEADADYEAEQDLVDPTAEFQARYPCDTCGKQFVGLLALQNHQCINQIQSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNTGLWMPQNKVTTKISKHEVIEAPQPPITRSSQPTPATSVAKRRLPPEVEVTVVNPNKKLRSDDSIEMDQQNSMSGGTEDRYCNICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYEGGEGSSSVGQIEDDGHACDVCGDQFDSEKDLSSHKAVHHAEDSGESDDEGSTLVQQPGEFTCSQCGDGVATPRDLIAHRTMHATPSKFFCNICKVYFARALDLSSHTRARHSDNEKVFFPCAMCDRFYMNKKSLQRHIEMMH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00953740;
- 90% Identity
- -
- 80% Identity
- -