Basic Information

Insect: Pararge aegeria
Gene Symbol: -
Assembly: GCA_905163445.1
Location: NC:14437576-14450171[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00079 0.032 14.3 4.0 1 23 134 156 134 156 0.96

2 14 1.8e-06 7.2e-05 22.6 3.2 2 23 162 183 161 183 0.97

3 14 0.0034 0.14 12.3 0.6 1 23 211 233 211 233 0.98

4 14 0.17 6.8 7.0 0.4 5 23 249 267 247 267 0.93

5 14 6.2e-05 0.0025 17.8 3.4 1 23 287 309 287 309 0.98

6 14 3.5e-06 0.00014 21.7 3.1 1 23 321 343 321 343 0.98

7 14 8.1e-06 0.00033 20.5 2.2 1 23 349 371 349 371 0.98

8 14 1.8e-05 0.00075 19.4 4.3 1 23 377 399 377 399 0.98

9 14 8.3e-08 3.4e-06 26.8 1.6 1 23 405 427 405 427 0.96

10 14 5.2e-06 0.00021 21.1 2.6 1 23 433 455 433 455 0.97

11 14 9.3e-05 0.0038 17.2 2.5 1 23 461 483 461 483 0.96

12 14 1.2e-05 0.00049 20.0 3.4 3 23 491 511 490 511 0.99

13 14 9e-08 3.7e-06 26.7 1.3 1 23 517 539 517 539 0.99

14 14 0.0064 0.26 11.4 0.7 1 20 545 564 545 567 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00079	0.032	14.3	4.0	1	23	134	156	134	156	0.96
2	14	1.8e-06	7.2e-05	22.6	3.2	2	23	162	183	161	183	0.97
3	14	0.0034	0.14	12.3	0.6	1	23	211	233	211	233	0.98
4	14	0.17	6.8	7.0	0.4	5	23	249	267	247	267	0.93
5	14	6.2e-05	0.0025	17.8	3.4	1	23	287	309	287	309	0.98
6	14	3.5e-06	0.00014	21.7	3.1	1	23	321	343	321	343	0.98
7	14	8.1e-06	0.00033	20.5	2.2	1	23	349	371	349	371	0.98
8	14	1.8e-05	0.00075	19.4	4.3	1	23	377	399	377	399	0.98
9	14	8.3e-08	3.4e-06	26.8	1.6	1	23	405	427	405	427	0.96
10	14	5.2e-06	0.00021	21.1	2.6	1	23	433	455	433	455	0.97
11	14	9.3e-05	0.0038	17.2	2.5	1	23	461	483	461	483	0.96
12	14	1.2e-05	0.00049	20.0	3.4	3	23	491	511	490	511	0.99
13	14	9e-08	3.7e-06	26.7	1.3	1	23	517	539	517	539	0.99
14	14	0.0064	0.26	11.4	0.7	1	20	545	564	545	567	0.94

Sequence Information

Coding Sequence: ATGATAGACTTTGAAAAAACTTGCCGGACGTGTATGAAGACGAAGAGTGATGTTACTCTAATAAGTTTGTTTGGCCCTCTGAAAATCGAGGATAATTGGTCATTAAAACTAGTCGATGTACTGAAGGAAACGATAACATTACAGaTAACAGAAGAAGATGGCCTACCGCAAAATTTATGTGATGAATGTGTGAAAAATCTTCATATTATGTACACATTTCGCAATCAAGCCCTGAATTCTGACAATGAACTTCGTAAAATAGTTTCAGCAAGTGTTCCTATAAAAAATGAAACAGAAGTTGCTTTGAAACATGAAAGCGAGTTTGATTATTCATACGATGagtttatatataacaatacaCATACAACAAAAATTGAATCTAGCGATGATTTATCAATGTACATTTGCAATATATGCAATAAAAAGTTTACCAAAcggaaaagatttttaaaacacCTAACAAATCATGAAGACCCAAAAGTTTCTTGTTCTATTTGTGGCAAAACATTTCATAGACAGACATCTTTAAATCGACATTTAAATAAGCACTGCACAGCCAATGGTATATCCGACAATCTTTCAAGTAATACAGTTGCAAATTTTGGCGTAAAAGTTGAGTATGAGGGTGAATTCAAATGTACGgcatgtaattttatatttgaaagtcAGAATTCTCTCTTACTACATCTTAATGAACATAGaaatatttgtatagatttaGAGGAACAATTATATGGGTGCATAAAATGCTCAATAAGTTATTCAAGTTTACAACAGTTAATGAATCACTTGGCAAATCATAAAGGACAAAGTGATATAGAAAGTGAATTGTTAGAAATTAGAAAAGAAGTTAAGCATCACCAATGCCCAGAATGTCATATGGTATTCGAAAAGCAAAGGTCATTAGCATCCCATTTGaagaaacacaaaataaaaatgagttTTAAGAGTCAGAAATTGTATTACTGCGACCATTGCAACAAAGGGTTTACTTTAAAGGCACTGTTAAGAAGGCATATGAAGTTGCACTGTGGGGATCGTCCGTATAAATGTACTCGATGTTCAAAAAGTTATACACGTCAGGATCAATTAGTCATGCATATCAGTAAGCATGACGGTACTAAGCGATACGCTTGCTCTCATTGTGATAAAGctttCACCCAACTCTGCAGTTTAAAAGATCATGAAAGAACTCACACGGGGGAAACTCCTTTTCTCTGCTCCCAATGTGGAAAAGGCTTCAGTAACAACTCCAACTTGAGACAGCATTTGAGACGTCACTCGGGACTGAAGCCGTTTGCTTGTAATCTTTGCCCTAAAAGCTTTTGTACTAAAGGTCAAATGAAATCGCACATGGACACCCACACAGGAGTTCACCCACACAAATGCAACGAATGCGGCGCCAGCTTCACTAAGACGAACTCCTTGAAGAAACATTCCCTGATTCATCTGGGTATAAAGCCACATGGGTGCGACAACTGCAGTATGAGgtTTTCATCAAAAGATCATCTGAAACGTCACCAGCGTATACACACGGGAGAGAAGCCGTACCGCTGTCCGCACTGTCCGCGCGCGTTCACACAGAGCAACGACTTGGTCAAGCACGTCCGCACGCACCTCGGGCAGAACATCTACCAATGCACGGTATGCCAAGCGAAATTCCGCCTTATGAGAGAACTGAAACGCCACTACCCAATACACTACATCAACGGTGCAGAACCTACCCCTGTACAGGAATCACCCCTCGTCGTACTTAAAGGGTGCTCCGAACAAGACATAGACAATGAAATACCGACGGATAGACAGATAACTATAACATTTAACAGTAACGTATTAGATAAAAATAGTATTGGCGATATAACCATAAACATAGAGCCGGGGAAGattagtaattag
Protein Sequence: MIDFEKTCRTCMKTKSDVTLISLFGPLKIEDNWSLKLVDVLKETITLQITEEDGLPQNLCDECVKNLHIMYTFRNQALNSDNELRKIVSASVPIKNETEVALKHESEFDYSYDEFIYNNTHTTKIESSDDLSMYICNICNKKFTKRKRFLKHLTNHEDPKVSCSICGKTFHRQTSLNRHLNKHCTANGISDNLSSNTVANFGVKVEYEGEFKCTACNFIFESQNSLLLHLNEHRNICIDLEEQLYGCIKCSISYSSLQQLMNHLANHKGQSDIESELLEIRKEVKHHQCPECHMVFEKQRSLASHLKKHKIKMSFKSQKLYYCDHCNKGFTLKALLRRHMKLHCGDRPYKCTRCSKSYTRQDQLVMHISKHDGTKRYACSHCDKAFTQLCSLKDHERTHTGETPFLCSQCGKGFSNNSNLRQHLRRHSGLKPFACNLCPKSFCTKGQMKSHMDTHTGVHPHKCNECGASFTKTNSLKKHSLIHLGIKPHGCDNCSMRFSSKDHLKRHQRIHTGEKPYRCPHCPRAFTQSNDLVKHVRTHLGQNIYQCTVCQAKFRLMRELKRHYPIHYINGAEPTPVQESPLVVLKGCSEQDIDNEIPTDRQITITFNSNVLDKNSIGDITINIEPGKISN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -