Basic Information

Insect: Pararge aegeria
Gene Symbol: -
Assembly: GCA_905163445.1
Location: NC:1616561-1627263[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.2 49 4.3 0.1 1 23 291 313 291 313 0.95

2 15 0.00058 0.024 14.7 6.9 1 23 421 443 421 443 0.98

3 15 0.023 0.96 9.6 0.9 1 23 449 471 449 471 0.98

4 15 0.00023 0.0096 15.9 0.6 2 23 478 499 477 499 0.97

5 15 1.3e-05 0.00053 19.9 1.1 1 23 505 527 505 527 0.98

6 15 6.8e-05 0.0028 17.6 1.7 2 23 534 555 533 555 0.97

7 15 4.4e-06 0.00018 21.4 0.4 1 23 561 583 561 583 0.98

8 15 8.7e-07 3.6e-05 23.6 0.5 2 23 590 611 589 611 0.97

9 15 6.9e-05 0.0028 17.6 0.2 1 23 617 639 617 639 0.94

10 15 7.6e-07 3.1e-05 23.8 2.5 1 23 645 667 645 667 0.98

11 15 2.8e-06 0.00012 22.0 1.1 1 23 673 695 673 695 0.98

12 15 2.7e-06 0.00011 22.0 0.3 2 23 698 719 698 719 0.97

13 15 2.7e-05 0.0011 18.9 0.3 1 23 725 747 725 747 0.97

14 15 9.3e-05 0.0038 17.2 1.3 1 23 753 775 753 775 0.98

15 15 1.1e-06 4.4e-05 23.3 2.1 1 23 781 803 781 803 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.2	49	4.3	0.1	1	23	291	313	291	313	0.95
2	15	0.00058	0.024	14.7	6.9	1	23	421	443	421	443	0.98
3	15	0.023	0.96	9.6	0.9	1	23	449	471	449	471	0.98
4	15	0.00023	0.0096	15.9	0.6	2	23	478	499	477	499	0.97
5	15	1.3e-05	0.00053	19.9	1.1	1	23	505	527	505	527	0.98
6	15	6.8e-05	0.0028	17.6	1.7	2	23	534	555	533	555	0.97
7	15	4.4e-06	0.00018	21.4	0.4	1	23	561	583	561	583	0.98
8	15	8.7e-07	3.6e-05	23.6	0.5	2	23	590	611	589	611	0.97
9	15	6.9e-05	0.0028	17.6	0.2	1	23	617	639	617	639	0.94
10	15	7.6e-07	3.1e-05	23.8	2.5	1	23	645	667	645	667	0.98
11	15	2.8e-06	0.00012	22.0	1.1	1	23	673	695	673	695	0.98
12	15	2.7e-06	0.00011	22.0	0.3	2	23	698	719	698	719	0.97
13	15	2.7e-05	0.0011	18.9	0.3	1	23	725	747	725	747	0.97
14	15	9.3e-05	0.0038	17.2	1.3	1	23	753	775	753	775	0.98
15	15	1.1e-06	4.4e-05	23.3	2.1	1	23	781	803	781	803	0.98

Sequence Information

Coding Sequence: ATGAGAGAAGACAATAAAATGCAGTGTTGTGTTCCTTTCTGTGGAAATACTTCCTTCAATAGCACGGGCAAGGACAATGCGATTTCTTTTCATAGGTTACCCAGTGAAGTAAATCGCTGTGCTACATGGATAAAAGCCCTAGGCTTGACAGACCAGCTGCTCAAGTCTACGGTTGTCTGCTCGCAGCATTTTCTAGATGACGACATTTGTGAAACAGGGAATGGCTTAAGACAAATTGCCACTGATGCTATCCCTTCTACTGTGCAGGTTTGCATGATATGcctacacacagacagaaagGTTATGCTAATGAGTAAACTTAAATTGGAAGAAGCATATGAAAAGTTAACCGGATATCTTTTGGGTGGTAGTAGAAACCTGAGACAGACACTCTGCGAACAATGTGCAGAGGGCCTGCTGAACTGCAATAAATTCAGAGAAAAGACTTTGAGAGCCCGTACACTGATGATGGActtagtagaaaaatataaatttATAACAATACAACATATACAAATGTTAAACCACACTGAAAACGAAATAATGTCAACAATACGTGACAACGGTGACTATGAAGTCCAAAGCGAACGCGCAAAATTAGAGGAAACGGGACGGGCCGTTGTTGAAATTGAGATAGTGAAAAATGAACCGTGTTATGACTTCATGTCAAATGATGAAGACTCAGATAGTCACAAACACGAAGGAAATGTTGTCATTAAAGAAGAATACTTATCCGATGATAGCATGCTGTTGGAAGAAAGACAACGTGATGATGAAACATGCAACAAAATAAACCAGAAACCAGCTCCCTTTGCGTATGAGGTACAAGTGTTGGAAGCGCAGGTCCCGTTGAAGAAAGAATTAAATATCTTCAGTTGTACGCTTTGTGATGCAGAGTTAATAAGTGATTTGGCGTACAACGAGCATATGAGCATGCATTTACAGGATAGCGATGGTGATAATGATACCTCACAGCTATGCGAGCCTGGTAAACCTGCCGCATCAAGCTGTTCTACACAGCTACGCATAGTTGATAGCAAGCAAGCCGTACATAGGATAAATCAACCACAACCTGCCGCATCATTAGGCCACACTttggTCCCACACTTTGAACTGCCCTCCAGTGAACATAACGATGCTAAAGAGGAAACTGTTGAAATCCAAATAGACGGAAACGTTTCTCTTCCCAAATCATTTGGACGTGAATTAGCACCGAGTAGTGATTTGAGACAGGACAATCAAACTACAGAAGGACAGTTATTCACTTGTGCGTTCTGCAACAACACTTTTGCGCACAAGTGTTCGCTCATGAGGCACATGAGAAGGCACACTGGTGAGAAACCATTTTCTTGTGCGTTGTGCGACGACAAATTTGCGGAACATGGTGCCTATAAAAGACACATGGAGCGTCACGCCGGCGGGAAAACTCTCAGTTGTAATTTATGCGATGCCAAATTTTCGCTAACTAGCTCTCTCATAACACATCAAAGAAGTCACAACCGCGAGAAACCGTTTTCTTGTACATTGTGTGATGCGAAATTCACACAGAGTTCTGCTTTTAAACGACACGTTGAAACCCATACCGGTGAAAAGCCACTTAGTTGTGATCTGTGCGATGCCAAATTTTCGCATAACAGCTCCCTCATATCACATTCAAGGACGCACACACGCGAGAAACCGTTCTCCTGTACATTGTGTGACGCAAAGTTCACACAAAGCGGTGCACTCAAAAGACATATTGATACTCACACTGGTAGGAAATCTCTAAGATGTGATATATGCGATGTTAAATTTTCTCAAAATAGCTCTCTCATAAGACATCAGCTAACTCACACCGGCGAGAAGCCGTTCTCTTGTACATTGTGTGACGCAAAATTCACACAAAGCGGTGCACTCAAGAGACACGTAGATGCTCACACTGGTGAAAAGTCCTTCAGTTGTAAGCAGTGCGGATCGAAGTTTACCCAAAACAGTTCGCTCGTGAGACATATGAAAACTCACACAAATGAAAAACGTTTTAATTGCAATTTATGTGACGTGAACTTTGCATTCCGCAGCGCACTCAGAAAACATATGAGAACCCATGGGCGTGTTTGCGAAGTGTGCAATCAGGGTTTCTCAAACAAAATGAACTTAGTGATACACATGAGAACTCACGCTGTCGAGGAGCCATTTTCTTGTAATTTATGTGACGCCAGATTTACACAAAACAGTACTCTCGCGGAGCATCTGAAGGCACATATTGCTggaaaacaatattattgtgAATTATGCAATTACGAATTCGCGAATAAGCGAAGCTTGACGATTCATAACAGGTCTCACACAGGCGAGAAGCCATTTTCTTGTAACGTATGTGACGCCAAATTCACTCAAAATTGTAATCTAGCGAGGCACATGAGGATCCATACTGGTGAAAAGCCTAATATGAGCTGTACCAGCTAA
Protein Sequence: MREDNKMQCCVPFCGNTSFNSTGKDNAISFHRLPSEVNRCATWIKALGLTDQLLKSTVVCSQHFLDDDICETGNGLRQIATDAIPSTVQVCMICLHTDRKVMLMSKLKLEEAYEKLTGYLLGGSRNLRQTLCEQCAEGLLNCNKFREKTLRARTLMMDLVEKYKFITIQHIQMLNHTENEIMSTIRDNGDYEVQSERAKLEETGRAVVEIEIVKNEPCYDFMSNDEDSDSHKHEGNVVIKEEYLSDDSMLLEERQRDDETCNKINQKPAPFAYEVQVLEAQVPLKKELNIFSCTLCDAELISDLAYNEHMSMHLQDSDGDNDTSQLCEPGKPAASSCSTQLRIVDSKQAVHRINQPQPAASLGHTLVPHFELPSSEHNDAKEETVEIQIDGNVSLPKSFGRELAPSSDLRQDNQTTEGQLFTCAFCNNTFAHKCSLMRHMRRHTGEKPFSCALCDDKFAEHGAYKRHMERHAGGKTLSCNLCDAKFSLTSSLITHQRSHNREKPFSCTLCDAKFTQSSAFKRHVETHTGEKPLSCDLCDAKFSHNSSLISHSRTHTREKPFSCTLCDAKFTQSGALKRHIDTHTGRKSLRCDICDVKFSQNSSLIRHQLTHTGEKPFSCTLCDAKFTQSGALKRHVDAHTGEKSFSCKQCGSKFTQNSSLVRHMKTHTNEKRFNCNLCDVNFAFRSALRKHMRTHGRVCEVCNQGFSNKMNLVIHMRTHAVEEPFSCNLCDARFTQNSTLAEHLKAHIAGKQYYCELCNYEFANKRSLTIHNRSHTGEKPFSCNVCDAKFTQNCNLARHMRIHTGEKPNMSCTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01151268;
90% Identity: iTF_01151268;
80% Identity: iTF_01151268;