Paeg002783.1
Basic Information
- Insect
- Pararge aegeria
- Gene Symbol
- -
- Assembly
- GCA_905163445.1
- Location
- NC:6595834-6696853[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 33 0.0091 0.37 10.9 0.1 2 23 256 278 255 278 0.94 2 33 0.0031 0.13 12.4 0.3 2 23 301 322 300 322 0.97 3 33 0.0035 0.14 12.2 0.1 1 23 326 348 326 348 0.97 4 33 4.3e-07 1.8e-05 24.5 0.7 1 23 353 376 353 376 0.98 5 33 0.12 5.1 7.4 1.5 1 23 426 449 426 449 0.95 6 33 0.032 1.3 9.2 0.4 2 23 475 497 474 497 0.94 7 33 0.14 5.6 7.2 0.6 3 23 521 541 519 541 0.92 8 33 0.00081 0.033 14.2 0.7 1 23 545 567 545 567 0.79 9 33 3.3e-06 0.00014 21.8 1.6 1 23 572 595 572 595 0.98 10 33 0.081 3.3 7.9 0.3 2 23 603 625 602 625 0.91 11 33 0.00056 0.023 14.7 2.9 2 23 633 655 632 655 0.96 12 33 1.9e-05 0.00077 19.4 1.0 1 23 661 683 661 683 0.98 13 33 0.022 0.89 9.7 1.0 1 23 689 711 689 711 0.99 14 33 2.9e-06 0.00012 21.9 1.2 1 23 717 740 717 740 0.96 15 33 0.05 2 8.6 2.6 1 23 944 967 944 967 0.92 16 33 0.33 14 6.0 0.6 2 23 994 1016 993 1017 0.94 17 33 0.0094 0.38 10.9 0.8 2 23 1065 1086 1064 1086 0.96 18 33 8e-06 0.00033 20.5 0.7 1 23 1091 1114 1091 1114 0.95 19 33 0.0021 0.088 12.9 1.8 1 23 1170 1193 1170 1193 0.95 20 33 1 41 4.5 0.1 2 23 1219 1241 1218 1241 0.94 21 33 0.013 0.55 10.4 0.5 3 23 1265 1285 1264 1285 0.97 22 33 0.43 18 5.7 1.6 2 23 1290 1311 1289 1311 0.91 23 33 0.00027 0.011 15.7 0.3 2 23 1317 1339 1316 1339 0.95 24 33 6.9 2.8e+02 1.9 3.0 3 19 1392 1408 1390 1413 0.87 25 33 0.046 1.9 8.7 1.7 2 23 1439 1461 1438 1461 0.95 26 33 0.11 4.5 7.5 1.9 2 23 1484 1505 1483 1505 0.94 27 33 5.2e-06 0.00021 21.1 0.7 1 23 1509 1531 1509 1531 0.99 28 33 1.8e-05 0.00072 19.5 0.2 2 23 1537 1559 1536 1559 0.97 29 33 0.011 0.46 10.6 3.9 2 23 1567 1589 1566 1589 0.95 30 33 0.014 0.56 10.4 6.3 2 23 1597 1619 1596 1620 0.95 31 33 6.8e-05 0.0028 17.6 0.9 1 23 1625 1647 1625 1647 0.98 32 33 7.8e-06 0.00032 20.6 0.7 1 23 1653 1675 1653 1675 0.99 33 33 5.3e-06 0.00022 21.1 1.8 1 23 1681 1704 1681 1704 0.97
Sequence Information
- Coding Sequence
- ATGGAGGGTGTTTTAAGTGATGGTATGTGCCGGTGTTGTGCCACGGAAGGCACTTTTAAAGACTTCCAAGTTCCTTACCAATGGATGGGTGTAGAAGAAATTTACGCCAATATGTTGAAGGATTGCTTTGATATAACTcTGTCAATATCAGAAGAGATCAACAATGGAGGTGTATGCGAGGTGTGCATCACTCAACTGCGCAATGCCTGCAACTTCAAACAACAAGTCCAGAAGACTGAAGAGAAATTTAAGAAGAAAATAGAGGAAGGTACATTCAAAGCTGACTCTATCAAAATGGAGGTGACgcggtttgatgatgatgactcgaATCTGTCAGCGGATGATTTCTCCAGTCAGGaATACGAAGTACCAATAAAAGTGGAGAAAGTTGAGGACAGGCCCAAAAAGCGTCAAGCGGCGTCCAAAGCGTCAACGTCGAAGGCCAAGAAGGCTAAAACGTCCGTCGGAGAACCATCAGCTAAACgtaacaCCCGAGCTTATACGAAGATGAAACGAGCACAATCTGATTTATCGGACTTTAAGAAGAACGAGCATAATCTCAAAATTATATTACGTCATTCGAATTCAAATCTTATAAGAAACAAAGTCAGTGGTGGCTACGGATGCCAGTTTTGCACCGAGGCGCACCCCCAGGCAAAAAATCTCAAAGAGcataatttacaaaaacacaaaattagAGAAATAGTAAAAAGTTTAGATAGCAAACCTTTAAAGTTTGTAATGAAACTAgatataaccaatttaaaatgTACAATTTGTGATAAAAGTCTGGCGAAACTGGATGAATTTATTGATCACGTAAAAGCTGAACATAATAAAGAAGTTTATAAAGATATCAAGAGTGTTATCATACCTTTTAAATTTGATACAAATAAACAGGTATGCGTCGAATGTCGTAAAGAGTTTCCATCTTTCAAAACATTACTAGAACATATGAATGTCCATTACAACAACTACATATGCCCGGTGTGTGGTAAAGGATTTGTAGCAGAGCTTCAATATGAGAAACACTCAAAAATGCATACAACTGAGATATTTCAATGCAACGATTGCGACAAAGTGTTTGCAGTTAAAGACAGCTTACGTAAGCATTTGCAAAGATTGCATAAGCGTGCCACCAAAAAGAAAGATAGTGCACAGTCGCGAGCGAAGAAACCAGTCAATTTATCAGAAACTAAGAAGAACCAGCATAATCTAAGAACAATATTGCTTTATTCCAATTCAAatcttataaaaaacaaaactgtcCTTGGTTATTGCTGCCAGTTTTGCCCAGAGTATTTTCCAGAACCGAAACTACTTAAAGAGCACTTTTTAAGAGAACACAGGCTCAAAGAGTTAGTCAGAGGTATAACTCGCAATCTATTTGACTTTGCCGTAAAATTAgatataaccgatttaaaatgcACCGTCTGCAACAAAAATCTTGATACACTGAGAGATTTTTTCGATCATATTAAAGCGGCACACGACATAGGAGTGTACAGAAAACTGAAAAGCGCAATcgtttcatttaaatttgacaCAGAAAAGTTAACGTGCATCGAATGCTTTAAGGAGTTTCCTAATTTCAAACGCTTACTGCAACACATGAATGTGCATTTCAGCAACTTCATATGCCCGATCTGTGGTAAAGCATTCCTAACTGCTAATCTAAATAAACACCACGTGAGAAGGCACAAGACCGAGGAATTCACTTGCAAATATTGCGACAAAGTGTATGGGAATCAAGAGAAGTTAACAAACCACCAGAGAAGAGTGCATCTGGGTTTTTATAAAAGGAACAAATGCGGTGTCTGCGACGAAAGGTTCGAGGACTACGCGCACAAAGTCAACCATATGGTCGAAGCACACGGGGCACCTGTAGTTCTCTTGAAATGCCATTTATGCGATATGAGCTACACAGACCAGAGGCGACTGACGACTCACATAAAGAAAGATCACAATTTGGAGAGGAAGTACGAGTGCGACCAGTGCGACCTGGACTTTTACAGTTCCTCTACGCTGAAGCGGCATATGGTGAAGCATACTGGTGCGAGAATTTACAAATGCGACGTTTGCTTGAAGTCGTACGGCACGCAGAACATTTTGAGGGAGCACAAGCGTAGCCACGCAGACGATCGCAGGTTTAAATGCGATCAGTGCGACAAAGCGTTTGTCCAGAATTCCACTTTGAAGAATCACAAGCGCGCGATGCACGGTGCGCCGTCCACTCGTGTCAGGGctACGCGATCTTCTAAGAAGAAAAACGTTAGCTCTATGCAAGATGAAGATGAGCagatacaagaaaaaatattggaaGACGACAGCTCAGATATGGATGGAGAAATACAAGAAGAAATATTGGAAAACGAGACTAATATTTACCACGAGCAACAAGTTAGCTCAGATATAGATGAAGAAATGCAGGAAGAAATGTTGGAAAACGAGAATAATATTTACCATGAGCAACGAGTAAGCTCAGATATGGCTGGAGAAATACAAGAAGAAATATTGGAAAACgagaataatatttatcatgAGCAACAAGTAAGCTTAGATATGGATGGAGAAATACAAGAAGAAATATTGGAAAACGAGAATAATATTTACCATGAGCAACAAGTAAGCTCAGATATGGCTGGAGAAATACAAGCAGAAACTCTGGAAAACAGCGAAACGGACCTCTCTAAGACAAAAATGAGTTCCGATATggataaaaacataaaagaaacGATATTAGAAAACAAGAAGAAGAACCACCATAATCTTAAAATGATTTTACTTTATTCGAATTcaagtataataaaatacaaagatgGCATCGGTTACAGCTGCCAGTTTTGCACGAAATATTTTCCGGAAGCGAAACATCTTAAGGAACATTTTTTACTAGAACACAAAATCttagatataataaaacttgCAAGATATACAACACTATTTAATCTTATGATTAAAGTAGacataactgatttaaaatgtACACTTTGTAACCAAAGTCTTGATAAACTCGAAGACTTTCTTGATCATATTAATGCTGATCATCATATTGAAGTtcacaaaaatttcaaaactgtAATCGCACCTTTTAAATTTGATACAGATAAATTTGTGTGTGTCGAATGTTGTAAGGAAGTACGGAATTTCAACATATTAGTGCACCATATGCAAACACATTTTAACAATTGCGTATGCGCTGTATGTGGGAGAGGATTCGTGAGCGACCGCATGTTTATGCAACATCTTAAAAGTCATGATCCCCAAGATTTTAAATGTGATGTTTGTCAAAAAGCATTTACAACAAAAGATAAGTTACGTGTTCATTTAGGTAGAGTACATGGTTTTGGTGGGATgtctaataaaacaaaattctttAGACCAATGCCACGGAAGGAAAAAAAACTACGACAGAACCTATCAGAAAACAAAAAGGACCTTCACaatatcacaataatattactttattcgAATTCAAATCTAATAAGAAACAAAGATGACCTTGGGTACAGCTGCCAGTTTTGCACAAAACAGTATCCGACTCCGAAGAATcttaaagatcattttttaaaagagcACTTCGTTTTAGATGTAGTTGAACATATAAATGCCAAATTATTTGATGCCATGATTAAAGTAGACATTACTGATTTACAATGTACACTTTGTGATACCAATCTTAATGAACTGGAAGACTTTGTTGAGCATATAAAAGCTGAtcataatattgaattttatagaGATTTTAATAGTGGAATCGTACCTTTTAGATTTGATACTGATAAATTACTATGCGTCTTATGCTCTAAGGAGTTtcccaaattcaaaaatttagtGGAACATATGAATCAGCATTACGACAACTGTATATGCGAAGTGTGTGGCAAAGGATTCGTAACAGGACGTCTGCATGCACAACATGTTAGAAGGCATAAAACAAACCAATTAACGTGTTATATTTGCGACAAAGTTCTTAGAACCAAAGGAACGTTACGAGCTCATGTGAAAAATGTACATTACGGTTTACGTGCTCccagaaagaaaaaaaaacaaatagatacAGAACTATGTCAAAAATTACCAGTAAATAAGAAGGACAATCACaatctcataaaaatattatcgtattCGAATTCAAATCTGATAAGAAACAAAGATGACCGCGGATACGGATGCGAATTCTGCACAAAACAATTTTCAGAAGCGAGTATCCTCAAAaaacattgcttaaaaaaacataaagtatcagaaataataaagtttttaaataaaaagtctttTGAAAACACAATGAAACTAGACATAACTGATTTGAAATGTACTCATTGCGACCTGAATGTTAGTAAACTGGAACACTTTATAGATCATATCAAAGCTGAGCACAATgttgaagtatataataattacaaaacaaaGATCGTACCTTTTAAATTTGATACGGATAAATTTTTATGCGTGGAATGTTGCAAGGAGTTCACGAATTTCAAGCTTTTACTTGAACATATGCAGGTACATTTCAAAAACTACGAATGCTCTGTGTGCGGAAAAGGATTCATAACAAGCCGTCTGTTCACGCGACACGCAAGAAGACATATGGCCAAGGAACTGAAATGTGAAATTTGCGACAAAGTGTTTGGCGATAAAGAAAAGTTGGGAAATCATCTAAGAACAGTGCATTTAggaaagaataaaagaaataagtgCAACATTTGCAACGAAAGGTTTGCATATCACTCGCACAAGCTTCGTCACATGGTCAAAGCCCATGGAGCGCCGGAACTGAAATTGAAATGCCATTTATGCGATAGAGTTTATAAATACCAAAAGCGGTTGACGGTTCATATAAAACACGATCACCATTTAGTGcgaaattttaaatgcaatctGTGCGAATTGTCTTTTGTCGATTCAGCTAAGCTGAAGATGCATATGACGAAGCATACTGGAGTAAGAGAGTACCAATGTGACGTTTGTTTGAAGTCGTACCGAAGAAAGGATACTCTTGTCGAACATATGAAAATTCACGAGAATGATCGTAGGTTCGTTTGCGATTATTGTGGGCAGAGCTTCGTGCAGAAATGCAGTTTAAGGAATCATATTCAAATACAGCATGGTATAAGCATTTAG
- Protein Sequence
- MEGVLSDGMCRCCATEGTFKDFQVPYQWMGVEEIYANMLKDCFDITLSISEEINNGGVCEVCITQLRNACNFKQQVQKTEEKFKKKIEEGTFKADSIKMEVTRFDDDDSNLSADDFSSQEYEVPIKVEKVEDRPKKRQAASKASTSKAKKAKTSVGEPSAKRNTRAYTKMKRAQSDLSDFKKNEHNLKIILRHSNSNLIRNKVSGGYGCQFCTEAHPQAKNLKEHNLQKHKIREIVKSLDSKPLKFVMKLDITNLKCTICDKSLAKLDEFIDHVKAEHNKEVYKDIKSVIIPFKFDTNKQVCVECRKEFPSFKTLLEHMNVHYNNYICPVCGKGFVAELQYEKHSKMHTTEIFQCNDCDKVFAVKDSLRKHLQRLHKRATKKKDSAQSRAKKPVNLSETKKNQHNLRTILLYSNSNLIKNKTVLGYCCQFCPEYFPEPKLLKEHFLREHRLKELVRGITRNLFDFAVKLDITDLKCTVCNKNLDTLRDFFDHIKAAHDIGVYRKLKSAIVSFKFDTEKLTCIECFKEFPNFKRLLQHMNVHFSNFICPICGKAFLTANLNKHHVRRHKTEEFTCKYCDKVYGNQEKLTNHQRRVHLGFYKRNKCGVCDERFEDYAHKVNHMVEAHGAPVVLLKCHLCDMSYTDQRRLTTHIKKDHNLERKYECDQCDLDFYSSSTLKRHMVKHTGARIYKCDVCLKSYGTQNILREHKRSHADDRRFKCDQCDKAFVQNSTLKNHKRAMHGAPSTRVRATRSSKKKNVSSMQDEDEQIQEKILEDDSSDMDGEIQEEILENETNIYHEQQVSSDIDEEMQEEMLENENNIYHEQRVSSDMAGEIQEEILENENNIYHEQQVSLDMDGEIQEEILENENNIYHEQQVSSDMAGEIQAETLENSETDLSKTKMSSDMDKNIKETILENKKKNHHNLKMILLYSNSSIIKYKDGIGYSCQFCTKYFPEAKHLKEHFLLEHKILDIIKLARYTTLFNLMIKVDITDLKCTLCNQSLDKLEDFLDHINADHHIEVHKNFKTVIAPFKFDTDKFVCVECCKEVRNFNILVHHMQTHFNNCVCAVCGRGFVSDRMFMQHLKSHDPQDFKCDVCQKAFTTKDKLRVHLGRVHGFGGMSNKTKFFRPMPRKEKKLRQNLSENKKDLHNITIILLYSNSNLIRNKDDLGYSCQFCTKQYPTPKNLKDHFLKEHFVLDVVEHINAKLFDAMIKVDITDLQCTLCDTNLNELEDFVEHIKADHNIEFYRDFNSGIVPFRFDTDKLLCVLCSKEFPKFKNLVEHMNQHYDNCICEVCGKGFVTGRLHAQHVRRHKTNQLTCYICDKVLRTKGTLRAHVKNVHYGLRAPRKKKKQIDTELCQKLPVNKKDNHNLIKILSYSNSNLIRNKDDRGYGCEFCTKQFSEASILKKHCLKKHKVSEIIKFLNKKSFENTMKLDITDLKCTHCDLNVSKLEHFIDHIKAEHNVEVYNNYKTKIVPFKFDTDKFLCVECCKEFTNFKLLLEHMQVHFKNYECSVCGKGFITSRLFTRHARRHMAKELKCEICDKVFGDKEKLGNHLRTVHLGKNKRNKCNICNERFAYHSHKLRHMVKAHGAPELKLKCHLCDRVYKYQKRLTVHIKHDHHLVRNFKCNLCELSFVDSAKLKMHMTKHTGVREYQCDVCLKSYRRKDTLVEHMKIHENDRRFVCDYCGQSFVQKCSLRNHIQIQHGISI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -