Basic Information

Gene Symbol
ncor1
Assembly
GCA_905163445.1
Location
NC:1858450-1973858[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.6e-08 6.4e-05 22.6 0.0 1 43 415 457 415 459 0.97
2 2 9.7e-05 0.072 12.8 0.0 5 46 866 906 866 906 0.93

Sequence Information

Coding Sequence
ATGGTTTGGTCGGCGCCTTCGGGGGAAGTCTTAATAGACATCGTTTCAAGGCCCGGGCAGACGGAGCACGGGCACGGGGCGCTGGCGTACGGCGGCAAGCAGACGGGCGTGGCGCCGGCGAGGCCCTCAGCGCCCTACGCGCCCAGCTACCCCTCCGCGCTGCGCCTGCACCAGCCCTATGGATCCGCGGCGCTCTCCTACAGGGACAGCTACGCCCGCGgtggcggcggcgcggcgggcgagTACCGTGCGGGCGCGCGGATGTCGCTGCTGGGCTCAGCGTACCtggcgccgcccgcgccgcccgcgcaCCACCCGCCGCCCGCGGACCCGCCGCCCTTCAAGAAGATCCGCCTGGCGGCCGAGCGGCCCGCCGCCAAGCACCAACTGCGCGTCGATACCCGGGAGCCGGTTATGAACTCTTATAACAACACGGTGGAGGTGCTGTCGCCGAACCCGCCTTCGGAGCATACCATCGAGGACCAGAGCTTTCGCACCACTAAAGATGATCTTCTACAGCAAATATCTAAGGTGGATCGAGAGATGGCGCTGTCGGAAACGACGCTCCAGAAGTTAAAGAAGAAGCAGGAAGAGTTAGAGCAGTCGGCGTCTAAGCCAGCGCTGACTGAGGAGCCCGAGGAGGCGCCTCCGCGGCACCGGAGTCTAGCGCAGTGTATCTACGCGGACAACAGAAAGAGGGCGGCAGCAGCACACGCGGTGCTAGCGCACCTGGGCCCGCCGGTGCTGTACCCGCTGTACAACCAGCCCGAGGACACGGCCGTGTACCACGAGAACATCCGCAAGCACCGCGCCTTCCGCCGGCGCCTCGCCGACCACCTCAAGACAGTGCGCCTCGAAACCGAAAAGCGGGAAGACGCGCTGACAGAAGAGTACAGCAGGCGGGCGGCCGAGTGGCTCCGACGCGTCGACAGGATCGAGCAAGGACAAAAGCGGAAGACGAAAGACGCGCGGAATCGGGAGTTCTTCGAGAAGGTGTTCCCCGAGCTGCGCAAGGCGCGCGAGGAGCGCGAGCGGTTCAACCGGCTGGGCGCGCGCGTCAAGTCGGAGGCGGAGCTGGAGGAGATCGCGGACGGGCTCCACGAGCAGGAGCACGAGGACAAGAAGATGCGCTCGCTCACCGTCGTGCCGCCGCTGCTGCGGGACCCGCGCCTCACGCGCCACAACCTCGACACCAACAAACGGTGTATGGATATGGAGACGGAATACAAAGAGTTAAAACTCCGCAACGTGTGGACGCGAGCTGAGAAGGAGATGTTCAGGGAAAAGTACCTCCAGCACCCCAAGAACTTCGGCCAGATCGCCTCCTTCCTACCCAGGAAAAGCGTGAGGGATTGCGTCAGGTTCTACTACCTGTCTAAGAAGGCGGAGAACTACAAGCAGCTGTTGAGGAAGCCGCGGCCGCGGAGGCACGCGAGGCCCAGGCCCGCGCCCGAGCCCGAGCTACCCGCCGGCGTCACCACCCGCCTGCAGCGGATACAGGGCTCGGCGCGAGTGGCGGATAAGGACGCGAGTATGGATGAGCTGTCACAACCGGCTGATACCACGCCCGTCGACCTCATCCCCGTACCTCCGGCGGCCCCGGCGCATCCTGCGAGGTCAGAATTGAGCCGAACGCCTCCCCTACCACCTTCTCCACCTCCTGGGTCGTCAGCACCTCCAGCTGCAACGACCGACGGCAGTCCGAGCGCATTAAGCGGTTCAAGCGGACTCACTGGGCTAAGCGGCCCAAGCAGTTCACCGGGCCTGAGTGGTTCCAACTGTTCAGGCTCAGATGGACTCAGCAATACGAGTGGACTTATCCCAATGTGTACTTCTAGTGCGAGTTTAAGTGTGCCCAATGCGTTGGCGAGTACTAGTAGTGCTGTGAGTAGTTTGAATGTGAGTGTTGTGACTAGTGTGCCTGGCCCGATTGGCAGCCCGGTCGTGTCGGCGCCGACGCCACCGGCGTGCGAAGGGCCGGCCACGCCGCTGGCGGACTTACCGCCGGTCACGGTCGCGGCTTCTACGCCGACGGTTATTACTACGACGTCAGCACCAAGTGGCGGTGCGGTGATGTCGTGTATGGCGGGCAGTAAGCCGCCCACGCCGCAGCCAGCGCAACCGCCCACGCCCACACATCCACCGCCCACGCCTGAGCCCGCGATGACGGAAAGAACGAGTACACCGTCCTCAACCATTCCACCGTCCAGCTCCACCACCACCACGGTCACAACACTCAACAGCGCCTGCGCAGTGTGCTCAGCCAACGGCGCTACCAGGGCCGTGGCTCCCTCGCGAGCTGGCCAGTACGGCCTCGACCCTTCCATGGCCGGGGCCAGGGTGTGCGAAGCGTGCCACTGCAGATTCGTGCGAGCGAGAAGAAGCAGATGTACGGTCCCATCTTGCGCTGGGCCGAGGGCGAAACGGTTGAGGCATTTACCACCGAGATGGCACGACTTACCGTTAGAACTGAAGAGGCCACTCATGGACGACTTCCAAATTCCAAGCGACCTCAGCAAGTGCTGTCTAACGTGCTTCAAGCGTATAACCCGGAGGTTAGACTCTGTGGGCGAAGGCGGTTCAGCGCCGGAACCTACCGAGGACGAAGCGGCCGGCTTCAGGACGTTGTTAAGAGAACACGGAACCGCCTGGGAGAGGATGTCAGCCGCCAGCGGGAAAACTCCAGCCAGCCTCAAGGCGTTTTACTTCACGTATAGAAAAAAACTCCAGCTCGACGTTTTATTGAGTGAAAGACAACCGTCGAGAGGAAGTGAAACAGACGACAGTATACTTAGTTCTGGGGACACGGACACTGCCAGTGCGGATTCACCCCGGCCTCCTCCCTTACCGGGGCCGCGGACGGATGCGGTGGCTCCGAGAAGGCATAGGAGGGATGAATATGATTCCTCCGCCACGGAGACCGCTGATGAAGAGAACGACGCGCCAAGTGCTAAGACCATAGCCCCCGCGCCAGCGCCTGTTGTAGCCATGGGGGCGGGCATCGGGGTCCCCGGGGCCACGAGCTCGAACCCCGGCACGGTGTCCGTGTCTGTGTCGAGCGCGCAGGGCCCCATCGCGTCCGTGGGCACGCCGCTCACCGTGCGCGACGTGGTGCTGAACATGATCGAAGTCAGCCTGATGAGGAACTCGAGGCCCGTGCCGCCGCACCCTAACCCCCAGACCATGAACCACCAGCACTCACAACCGACCAAGGTTCCAACGCACGAGCCGCTCGCGACGCTCACAGTGGTGAGCGGCGCGGGGCACGCCAGCTCGCCGCACTCCCCGCGCTCGCCGCACCGCGGCGCCACCATCACGCCGCTGCCGCCCGACGGCAAGGACGTCATGCTGCTGCACATCGAGCCGCGCCCGGCCGCGCCGCACCACCTGGCGCACGCGCACCCGCACCCGCACCCGCACGCGCCCGCAGACCCGCTCGACCTCAGCGAGAAGCGGCCGCGCCACGAGCCGCCCAAACCCCAACACCGCAACGCCGAATACGCGGCGTACAGAGCTGCGGAAAGACAATCCCCCACGCAATACAACTCCAAACCCAAACCCGTGGCTTCCCCCCGACCGTCGCTCAAGCTAGCCGCCAACCCCAAGGGCTCCATCACCCTGGGAACCCCTGTGGAAACCCGTTACGAGCCTCAACGAATACCCTCGGATCCGAAAACCGGGTCGATCACAGCCGGGACACCGGTCCACGGTCCTCATCACTTGCCGGAGAAAAGGAACTTGGAGTACAGGCGGCGTAGCCCTGGAGGCGCGTACTATGCGGGCGCGGGCAGCCAGCCGCGGCCGCAGTCGCCTTCCTCGTTTCAAAATGCGACAGCAACTGCAGTATCACGTGGCACGTACGGCCTTGAGAGACGGCAGATCATGCTTACGGACTACATCACCTCGCAACAGATGCACGGTGTGGTGAGAAGAGAACGGGAACCTTCCCATCATCACCAGCAGCAACATCAGCAGCACcaacagcagcagcagcagcagcagcatcAGCAACTCCAGCAACAGCAACACCAGCACCAGCAGCAGCAGCATCAACAacaacagcagcagcagcaccagcaacaacagcagcagcagcagcaacaCCAGCACCAGCAACAGCAACAGCAGCATCAGCAGCAGCAACACCAGCAGCAGCTTCAGCACCAGCATCAGCACCAGCCAATAAGGAGGGATCGCGACACGGTGTCCGTTATACAGAAGCACACGCACACCTACTCGCATCCCCACCCCCCGCCTGGTCACGAAGCGTTTGCGCAGCTGGTGAACGCGGCTTCGGTGGCGCCTGCGTTACCCGTGCCGCGCCGCGAGGAGCCCGCACCCGAGCCGCCGCCCGCGTCGCCGTTGCACCACGCGCCGCACCCGCCACACATGCACCACGACATCAGAGCGTCCCGCGAGTTCAGCATGTCCCAGAAGTACCACCCGCAGTACACCACAGCGGAACGACGCGCCCCCCCTCCACAGCAGCGCGACGTGCGAGATAGTCGAGAACGAATGGTGCCCATGCAAGAGCGGCACTACGTCATCGAGCAGCACCAGTCGCACCAGCAGCACCAACAGCACCAGCAGCACCAGCCGCACCAGCATCAGCAGCACGCGCAGCAACTGCTCATAGATCGGCACCTCATACCGACCCACTCTCAGAACATGTCGAGTGGGGAGGAGCGGCGCGGGTCGAGCGGCAGTGGGGGGGCGGCGGGCTACGGGGCGCCGGGCAAGCGACCCATCCATCAACTTGACAGGAAAGATGGGTATGTTCTTCACACTCTACTCAGTCTTCTCTCATTCCCCTTTTTTTGGACGCGCATCTCGCGTAAGCCTTGTGTAATttaTGTGGGGTTGCGCAGGCGCACGGCGGCGAGCGCGGTCAGCACGccgggcggcggcgcgggcgcggcccCGGCGccgggcgcggcgggcggcggcgcggcggccgGCGCCGAGCTGTCGGCCGCGTCGCTCATCAACGCGATCATCACGCAGAAGATCAGCCAGACCAGCAATCAGAGGTTTCCATCGAAGATCATACGTGAGAGTGACGGGGTGGTGCCGCAATCGGACCGCATGCTCATCGACCACCAGCGCGATCGCGACCGCGAGTCGGAGCGTGATCGCGATCGCGAAAACGACGGCCCGCCACAACTGACGGCGCACACCACGAGCATGAAGCTGGGAGACCTAGCGTCGAACATCATCGTCAGGGACTTTAGTAGTCCGAACACCAACTCACTTCTACATCATAACAACCGGTTCGCGGTGTCGAGTGCGGACACGTacgcgggcggcgcgggcgtCGCGGCGGGCGCGCCGGGCGCCGGGCCGGCCGACGAGTGGCGCCGCGACGCGCCCAAGCACGCGCCCTACCTGGAGCCCGTGTCGCCGCCGGACAACCACCACACGGGGCGCGGCGGCGCGCGGCGCTACAGCGCGGCGCACGTGGGCGGCGGCAGCGTGCTCACGGCGTACGACTACGTCACGACGCGCATCGTGGAGGTGATGCGCAACGACGAGGAGCGCAGCAAGCCGCCCTTCCACCCGCCCACGTCCTACGCGTACCCGTACTCCGCGCTCAACGTGGCCACGCCCGCCACCGACGGTGAGTGCCTACCAATTTTTTTCATCATTCTCAacatttcaaccaatcgacgtccactgctgtccATCGCTGCTATGTGCGCTAGCttgtctccagcggctcccagcgactcgcctgatgtcatctgtccacctcgttgggggccgacggTGTGGGGTCGACATATATGCACCTTaagaacccaacgtccatcggttctccgagcTCCCGCGGCGCCGCTGCCGGCGCCAGTGCAGCCGGAGCCCGCCCCGCTCATGTCGGCGCAGTACGAGCCGCTGTCGGACGAGGACTGA
Protein Sequence
MVWSAPSGEVLIDIVSRPGQTEHGHGALAYGGKQTGVAPARPSAPYAPSYPSALRLHQPYGSAALSYRDSYARGGGGAAGEYRAGARMSLLGSAYLAPPAPPAHHPPPADPPPFKKIRLAAERPAAKHQLRVDTREPVMNSYNNTVEVLSPNPPSEHTIEDQSFRTTKDDLLQQISKVDREMALSETTLQKLKKKQEELEQSASKPALTEEPEEAPPRHRSLAQCIYADNRKRAAAAHAVLAHLGPPVLYPLYNQPEDTAVYHENIRKHRAFRRRLADHLKTVRLETEKREDALTEEYSRRAAEWLRRVDRIEQGQKRKTKDARNREFFEKVFPELRKAREERERFNRLGARVKSEAELEEIADGLHEQEHEDKKMRSLTVVPPLLRDPRLTRHNLDTNKRCMDMETEYKELKLRNVWTRAEKEMFREKYLQHPKNFGQIASFLPRKSVRDCVRFYYLSKKAENYKQLLRKPRPRRHARPRPAPEPELPAGVTTRLQRIQGSARVADKDASMDELSQPADTTPVDLIPVPPAAPAHPARSELSRTPPLPPSPPPGSSAPPAATTDGSPSALSGSSGLTGLSGPSSSPGLSGSNCSGSDGLSNTSGLIPMCTSSASLSVPNALASTSSAVSSLNVSVVTSVPGPIGSPVVSAPTPPACEGPATPLADLPPVTVAASTPTVITTTSAPSGGAVMSCMAGSKPPTPQPAQPPTPTHPPPTPEPAMTERTSTPSSTIPPSSSTTTTVTTLNSACAVCSANGATRAVAPSRAGQYGLDPSMAGARVCEACHCRFVRARRSRCTVPSCAGPRAKRLRHLPPRWHDLPLELKRPLMDDFQIPSDLSKCCLTCFKRITRRLDSVGEGGSAPEPTEDEAAGFRTLLREHGTAWERMSAASGKTPASLKAFYFTYRKKLQLDVLLSERQPSRGSETDDSILSSGDTDTASADSPRPPPLPGPRTDAVAPRRHRRDEYDSSATETADEENDAPSAKTIAPAPAPVVAMGAGIGVPGATSSNPGTVSVSVSSAQGPIASVGTPLTVRDVVLNMIEVSLMRNSRPVPPHPNPQTMNHQHSQPTKVPTHEPLATLTVVSGAGHASSPHSPRSPHRGATITPLPPDGKDVMLLHIEPRPAAPHHLAHAHPHPHPHAPADPLDLSEKRPRHEPPKPQHRNAEYAAYRAAERQSPTQYNSKPKPVASPRPSLKLAANPKGSITLGTPVETRYEPQRIPSDPKTGSITAGTPVHGPHHLPEKRNLEYRRRSPGGAYYAGAGSQPRPQSPSSFQNATATAVSRGTYGLERRQIMLTDYITSQQMHGVVRREREPSHHHQQQHQQHQQQQQQQQHQQLQQQQHQHQQQQHQQQQQQQHQQQQQQQQQHQHQQQQQQHQQQQHQQQLQHQHQHQPIRRDRDTVSVIQKHTHTYSHPHPPPGHEAFAQLVNAASVAPALPVPRREEPAPEPPPASPLHHAPHPPHMHHDIRASREFSMSQKYHPQYTTAERRAPPPQQRDVRDSRERMVPMQERHYVIEQHQSHQQHQQHQQHQPHQHQQHAQQLLIDRHLIPTHSQNMSSGEERRGSSGSGGAAGYGAPGKRPIHQLDRKDGYVLHTLLSLLSFPFFWTRISRKPCVIYVGLRRRTAASAVSTPGGGAGAAPAPGAAGGGAAAGAELSAASLINAIITQKISQTSNQRFPSKIIRESDGVVPQSDRMLIDHQRDRDRESERDRDRENDGPPQLTAHTTSMKLGDLASNIIVRDFSSPNTNSLLHHNNRFAVSSADTYAGGAGVAAGAPGAGPADEWRRDAPKHAPYLEPVSPPDNHHTGRGGARRYSAAHVGGGSVLTAYDYVTTRIVEVMRNDEERSKPPFHPPTSYAYPYSALNVATPATDGECLPIFFIILNISTNRRPLLSIAAMCASLSPAAPSDSPDVICPPRWGPTVWGRHICTLRTQRPSVLRAPAAPLPAPVQPEPAPLMSAQYEPLSDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00953468;
90% Identity
-
80% Identity
-