Basic Information

Gene Symbol
-
Assembly
GCA_905163445.1
Location
NC:10887436-10891388[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 1.6e-07 0.00011 21.8 0.1 2 45 260 305 259 306 0.93
2 4 8.1e-10 6e-07 29.1 0.3 3 43 314 358 312 360 0.93
3 4 2e-12 1.5e-09 37.4 0.0 1 44 365 408 365 410 0.96
4 4 1.6e-09 1.2e-06 28.1 0.0 4 44 418 460 416 461 0.96

Sequence Information

Coding Sequence
ATGAGTGATTTTGATGTAAGCGACCTAGACAGTGACGAAGAAAATGACCTGCAAGATTTAGAACAATTGAACGCTGTATTAGAGAGTGAGGATCCCGGGCCAAGTGCTGAACTGCGAGAAGCCTCCATATCTGGCTCAAATATCTGCAGCGCTTCGTCTAGTTACGGGGAAAGCTCTAAAGCTGAAACAGCTCTGGCTCTTAACAGAATGTGTGATGATAAATTACGAAAGCTGGAAAGTATACTGCAAGCAAGGTTACCAGAGTGTCGTCGAAGACTTATCGAAGTTCAGAAAATGACCGAGTTCGACAGGTTTGACAAAGACAATTTCCGCTACGTCAACTGCGGGAAGCCGTATTTTAAAGACAACCGGGGCTTCCCAGCTCCTGAAAACGAGGATACCTTACTCATGACTAAATACCAAATGTACAACTTCTCTGGGATATCCTCCGTCCCCGGGTGGACCGTTAAGGACAAGTGCCAACTCACGGAGCTCGTTTTGAAGATGtcgaaggagaaaaaaaaaaaggaactggaaaaaaaaatttcaaatctgAAACGTGAAAACAAAGAGTCAAATTCAAAAGAAATTGAGGAAACCATATCGGATCTCAAGCGGCAGATCCTTTGTGTAGATAAAATTCCTCTTAAGGCGTTAGCTCTTCCCATAAATGAGGATTACGACTGGGACTATGTTGCAAACAAACTAAGTGATAGGCACAGTGCTCAGGAATACAGATCTCTTTGGAGATTATTCTTACATCcgtcaataaataaaagtacttgGACCCGCTCTGAACATATATCTCTGCAGAAAATTGCTTTTGAGAAAAAACTGCAGGATTGGGATACCATTTCTAAGGAGCTAGGCACTGGCAGAACAAACTACCAATGTTTTGTTTACTTCCGTACTAACATGAATAACACATTTACAAGTCGGAAATGgacaaaagaagaagaagaatacctTAAGAGgttaattgaatattataaagaagataACTACATTCCGTGGGGAAAAGTTGCAGCTACCATGGAAAATAGGACAAAAgtacaaatttataataagtttttcaGACTATGTGAACTTAGGAAAGGCAAATTTCTACCCGAGGAAGATTCCGTTATACTCACTTGTGTACAACATTTTGGGCCAAATTTCAAAAAAGTGACGGAATATCTCCAAGGTCGATCCGTGACACAGTGTCGAGATAGATACCATGTCTTGATGAAGCAACGATTTTCAGCAGTTTGGACAGTAGATGAAGATCGTAAATTAGTTCAACTTGTAGCTACCCAAGATGTGTCCACAAATTTTTCAACCGTATCACAATACTTTCCTGGAAAAGATCGAGTGAACATTCGAACCAGGTACATAACTTTATCTAGATGGATGAGAAGAAATCCTAATATAGACATTTCTCATGCACCAAGACGTGGTGCTAGACGATTAGGGCATGGAAAGTCAACAGAAGATCTAAACAGAGCCATAGAGtgtttaaaaaaacgtttacaGTCTGAAGTGactgacaaaaaaaagaaaaagattacAAGAGATTCGCCTGAAGAAGTTATAGACGATGCAATTGTAGCAGTTCTTACTACAGAGAACACAAGACTTTTGGAGGCGCAAAAGTTACAACACTGTCAAGAAGAACAAGATAACTATACAGTTGAGGAGGAAATGAAGAATtgtaatattacattattacaaaaaattctTATGTTGTTGAAAGCAAAATTAAATAGACACAAGTTTGCTAATAGCCCTGCACGTAACACTTTTCAAGGCTTATTAGATCCAGGAATGGCCGCAAATCTTATTCAATTTAGGtcatattcaaaaaaaaatgctgtgAAAAATGTCAAAATGGATAAAAAGATAGACATTTGGGGAAATGGCACATTAGGAAAGCTGTCTTATGTATTCCCACCGCATTATGCGACGATAACTGGGTGCAAAAAACTGATGTCCTATTATATCAGCCCTAAATCAGACAGGGACGAGACAAAGAATGTTAATATTCTAATCAAAAGAAATCTTATGGTAAAAGATCAGGTTACCATGTTAATGGAGCGTTTCAATACTCTATTCCTCTGGCCAATGCTTCTTTCTAATGCATCACCGGAAGATTGtaaaaccaatttaaaaaattatgtatctCCATCAAAATCGGTCAGAAGATTAATTACTTATGAGAACTATAATTTCacggaaaattttaattttatattgccACTAcctgatttgaaaaaaataggAGATGTTAATGAAACTACCATCGATATGGTTGAGTCGGATGATAACCACACTATTAATAATGATGCAAGTTATTTTGACTCTCTCGTggagtaa
Protein Sequence
MSDFDVSDLDSDEENDLQDLEQLNAVLESEDPGPSAELREASISGSNICSASSSYGESSKAETALALNRMCDDKLRKLESILQARLPECRRRLIEVQKMTEFDRFDKDNFRYVNCGKPYFKDNRGFPAPENEDTLLMTKYQMYNFSGISSVPGWTVKDKCQLTELVLKMSKEKKKKELEKKISNLKRENKESNSKEIEETISDLKRQILCVDKIPLKALALPINEDYDWDYVANKLSDRHSAQEYRSLWRLFLHPSINKSTWTRSEHISLQKIAFEKKLQDWDTISKELGTGRTNYQCFVYFRTNMNNTFTSRKWTKEEEEYLKRLIEYYKEDNYIPWGKVAATMENRTKVQIYNKFFRLCELRKGKFLPEEDSVILTCVQHFGPNFKKVTEYLQGRSVTQCRDRYHVLMKQRFSAVWTVDEDRKLVQLVATQDVSTNFSTVSQYFPGKDRVNIRTRYITLSRWMRRNPNIDISHAPRRGARRLGHGKSTEDLNRAIECLKKRLQSEVTDKKKKKITRDSPEEVIDDAIVAVLTTENTRLLEAQKLQHCQEEQDNYTVEEEMKNCNITLLQKILMLLKAKLNRHKFANSPARNTFQGLLDPGMAANLIQFRSYSKKNAVKNVKMDKKIDIWGNGTLGKLSYVFPPHYATITGCKKLMSYYISPKSDRDETKNVNILIKRNLMVKDQVTMLMERFNTLFLWPMLLSNASPEDCKTNLKNYVSPSKSVRRLITYENYNFTENFNFILPLPDLKKIGDVNETTIDMVESDDNHTINNDASYFDSLVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-