Paeg008342.1
Basic Information
- Insect
- Pararge aegeria
- Gene Symbol
- bab1
- Assembly
- GCA_905163445.1
- Location
- NC:21464103-21997975[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-17 2.9e-14 52.1 0.0 1 43 631 674 631 676 0.95 2 2 10 1.3e+04 -4.8 2.6 6 15 773 782 770 783 0.83
Sequence Information
- Coding Sequence
- atggaGAACGGGCTCGGGTGCGCCGCGCTGGGCAGCAAGGATGTGCGAGTTCGCGAGGGGGGAGGGGTAGAAGGACACCGAAAAGAAGCCTCCTACCCCACATTAGGCAAGtatactttagttttaagaataataatgattatttgtAAAACGAAACGAATGGTTTGTTTATTGCAACTCGATTGTCCAGCGCGATTCAAAAAAGTGGATGTCAGTGCAAAGGAAATTCCGCGGCTGGGTGTGCGTGCGCGTTCTCATGTAGGACTAAAGTTGCGTGCGGGGGCGAGTAGCCTTGAGCGAAAGGGACGCGGCGCCGTCGCCGCCGCGCCGCCTTCCCAGGACGTCGGGCAAACCGCTAGCGGAGCTACGGAGCATCCAGAAACAGCGGAGTTGGCAGTCTACACAGCTGAGCGAGTAGACTACACAGCGGAGCGGGCAGTCTACACAGCTGAGCGAGCAGACTTCACATCGGAGCGGGCAGTCTACACAGCTGAGCGAGTAGACTTCACAGCGGAGCGGGCAGTCTACACAGCTGAGCGAGCAGACTTCACAGCGGAGCGGGCAGTCTACACAGCGGAGCGGGCAGTCTACACGGCGGAGCGGGCAGTCTACACAGAGAAGTCACATTCAGAGAAGACCCTTGGTTATTTTTCTTTCCAGGATTTAGGCTATGAGAGAAGGAATCAGTCTGTGAAGCTACACCCTGCCTGCAGTAGGTACGAACAACAAAGTTGCGAGTTGACTTGCAAGCCAGCGGAAGTGAGGATGTCGCTGGCCGTGCGGCGCGCGGGCTCAGGCGGAGGGCGGGCAGCGCGCGGGCGTGCTCGCGTGCCGGGCGGGCAGCGTGCGCGGGCGCCGCGGGATCGATGCGGGCGCGGGCAGGCCGGGGCGGGCCGTGGGCAGGGCGCAGCGGCCATTCGCTTGCGGCACGCCCCGCCCCCGGGCCCGCCCGCGCGCCCCGCCGAGCGCGCCTCGAACACCGCGCTCAGTGTTTCGCGAGTCGTCGCCCGCGGTGCATGCGTCGCGTGCTTCATACTCTACGCGTTACGTTGCAGATGCGAGTTCGCCGCCGCTAGAAGCATGCCGGCCGAGGAGGAACCCGCGGCGATGGACGGCCGGGAAGCCGCCGACGGCTCGCCCCAGCAGTTCTGCCTGCGCTGGAACAACTACCAGGCCAATCTGGCCAACTGCTTCGACCAGCTGCTGCAGACCGAGTCCTTCGTGGACGTGACGCTCGCCTGCGAGGGCCGCAGCCTGAAGGCGCATAAGGTCGTGCTCTCCGCGTGCAGCCCCTACTTCCAGACGCTCTTCATGGAGAACCCGTGTAGGCATCCGATCATAATAATGCGCGACATCAAGTACTGCGACCTGAAGGCGGTGGTGGATTTCATGTACCGTGGAGAGATAAACGTGTCGCAGGACCAGATCGCGGCGCTGCTCAAGGTCGCTGAGACGCTGAAGATAAGGGGTTTGACGGACGTGAGCGGAGACCACGCGGTGCTGCGCGCTGGAGGCATGGAGGCCCGCGCCGCCAAGAGGCCCGGCAGCCGCGAGGCCGAGTCCCCAGGCAAGGCCCGCCGCCGCTCGGGGGATGGTTCCAGCCCGCGCACGTCGCCCGCCGACCTGCTGCACGCGCCGCCCGACCCCGCGGCGCCCGCGCTGCACGCCGACGACGTGGACATCCGCCCCGGCATCGCCGAGATGATCCGCGAGGAGGAACGGGCCAAATTGCTTGAAAATTCTCACGCTTGGCTCGGTGCCTCCACATCGTCGATCGCAGCAGATAGCTACCAGTACCAGCTGCAGTCTATGTGGCAGAAATGCTGGAACACCAACCAGAGCATTGTGCACAATCTGAGGTTCCGCGAGCGTGGGCCCTTGAAGTCCTGGCGCCCGGAGACTATGGCTGAGGCTATATTCTCTGTTCTGAAGGAGGGGCTGTCCCTCTCTCAGGCTGCACGAAAATATGACATTCCGTACCCAACCTTTGTGCTGTATGCAAACAGGGTGCATAACATGTTGGGACCCAGCGCCGATGGCGGTGCAGATTTAAGACCCAAAGGTCGCGGGCGGCCTCAGCGCATCCTGTTGGGCGTGTGGCCGGACGAGCACATCCGCGGAGTCATCCGCGCCGTCGTGTTCCGCGACTCGCACGCCGCACACGCTGCGCACGCCGTGCACGCCTCGCACCACATCAAGGAGGAGGTGCTCCCCGTCTATCCTGCCATCACGGATGGTATGACTCCGGTACCGAATGTTTACCCCGTGCCGTGCGGCAACGGGCGCGACGGCGGCGTGTCCCCCAACGCCGCTGCCGCCGCTGCCGTGGCCGCCGTGGCGCACGGCCTGCGCCGCCAGATGTGCAACATGGTGGTGGCCGCGCAGAGACCACCCGACCATCAGACACATCTCGGCTTGCCACCGATGCCACTGCAGTCCCCGCGCCTGCCGTCGCCGCTCACCGCCGGCCTGGAGTCCCCGCTGTGCTCTCCGCCGCCGCCCGGCCACGCTCTCGAGCCGCCAAAGCCCGCCGACCCATTCCGACCCTTCGCCTCGCCAAGACCTGACAGCCGCTACAGTGAACGCGACGTCGTCGCTGAGATCACCGACATGGGCCCACCCAAGACCCCGGTATCGATGAGCAAGAACGGCAAGGAGATGTCGATGCCCGTGAAGATGGAGCTGCCTCCAGCAGAGGCCCGCGCTGAGAACATCTGA
- Protein Sequence
- MENGLGCAALGSKDVRVREGGGVEGHRKEASYPTLGKYTLVLRIIMIICKTKRMVCLLQLDCPARFKKVDVSAKEIPRLGVRARSHVGLKLRAGASSLERKGRGAVAAAPPSQDVGQTASGATEHPETAELAVYTAERVDYTAERAVYTAERADFTSERAVYTAERVDFTAERAVYTAERADFTAERAVYTAERAVYTAERAVYTEKSHSEKTLGYFSFQDLGYERRNQSVKLHPACSRYEQQSCELTCKPAEVRMSLAVRRAGSGGGRAARGRARVPGGQRARAPRDRCGRGQAGAGRGQGAAAIRLRHAPPPGPPARPAERASNTALSVSRVVARGACVACFILYALRCRCEFAAARSMPAEEEPAAMDGREAADGSPQQFCLRWNNYQANLANCFDQLLQTESFVDVTLACEGRSLKAHKVVLSACSPYFQTLFMENPCRHPIIIMRDIKYCDLKAVVDFMYRGEINVSQDQIAALLKVAETLKIRGLTDVSGDHAVLRAGGMEARAAKRPGSREAESPGKARRRSGDGSSPRTSPADLLHAPPDPAAPALHADDVDIRPGIAEMIREEERAKLLENSHAWLGASTSSIAADSYQYQLQSMWQKCWNTNQSIVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDSHAAHAAHAVHASHHIKEEVLPVYPAITDGMTPVPNVYPVPCGNGRDGGVSPNAAAAAAVAAVAHGLRRQMCNMVVAAQRPPDHQTHLGLPPMPLQSPRLPSPLTAGLESPLCSPPPPGHALEPPKPADPFRPFASPRPDSRYSERDVVAEITDMGPPKTPVSMSKNGKEMSMPVKMELPPAEARAENI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01151316;
- 90% Identity
- iTF_01151316;
- 80% Identity
- iTF_01151316;