Basic Information

Insect: Paracoccus marginatus
Gene Symbol: HIVEP1
Assembly: GCA_900065295.1
Location: FIZT01025855.1:1265-8284[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.034 2.7 8.9 1.1 1 23 251 274 251 274 0.97

2 13 0.25 20 6.1 0.3 1 23 400 422 400 422 0.97

3 13 0.0074 0.59 10.9 3.2 1 23 715 737 715 737 0.95

4 13 0.81 65 4.5 3.1 2 23 742 764 742 764 0.93

5 13 0.91 72 4.4 0.9 2 23 801 819 800 819 0.85

6 13 3 2.4e+02 2.7 1.1 1 20 839 858 839 861 0.72

7 13 0.61 49 4.9 0.1 3 23 869 889 867 889 0.96

8 13 0.00092 0.073 13.8 1.1 1 23 895 917 895 917 0.96

9 13 0.00021 0.017 15.8 1.0 1 23 923 946 923 946 0.93

10 13 0.0011 0.089 13.5 1.4 1 21 950 970 950 971 0.95

11 13 3.1e-06 0.00025 21.6 2.2 1 23 1049 1071 1049 1071 0.98

12 13 0.19 15 6.5 2.5 1 23 1077 1099 1077 1099 0.89

13 13 7.7e-08 6.2e-06 26.6 1.5 1 23 1105 1127 1105 1127 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.034	2.7	8.9	1.1	1	23	251	274	251	274	0.97
2	13	0.25	20	6.1	0.3	1	23	400	422	400	422	0.97
3	13	0.0074	0.59	10.9	3.2	1	23	715	737	715	737	0.95
4	13	0.81	65	4.5	3.1	2	23	742	764	742	764	0.93
5	13	0.91	72	4.4	0.9	2	23	801	819	800	819	0.85
6	13	3	2.4e+02	2.7	1.1	1	20	839	858	839	861	0.72
7	13	0.61	49	4.9	0.1	3	23	869	889	867	889	0.96
8	13	0.00092	0.073	13.8	1.1	1	23	895	917	895	917	0.96
9	13	0.00021	0.017	15.8	1.0	1	23	923	946	923	946	0.93
10	13	0.0011	0.089	13.5	1.4	1	21	950	970	950	971	0.95
11	13	3.1e-06	0.00025	21.6	2.2	1	23	1049	1071	1049	1071	0.98
12	13	0.19	15	6.5	2.5	1	23	1077	1099	1077	1099	0.89
13	13	7.7e-08	6.2e-06	26.6	1.5	1	23	1105	1127	1105	1127	0.99

Sequence Information

Coding Sequence: ATGGAAATAGACGAGTCATCTATCGACGTTTGTCGACTATGCGCGCAAAATGACGATTCGCGCTCTTTTATCCCTCTGTACACGGACGACAAACGCGAGCGAATCGTAGCGAAACAAATTAATCAACTGGTCGCGAATTTGGTAGCGCCCGATGATGGCTTGCCTCAGATGATTTGCAGCAAGTGTTCGAGAAACGTAGAAACGTGTTATTCGTTTGTCTGCAACGTAATTGAAACGCAACACAAGTTAAAGCGTTTGAAACGGGCGACTGATCGGAAACGAAAACACGCGTCCGACGACGAATGCGGCGAGAATTGTCGATTGGAAAACGTTACGTTGAAGGATAATGATTACGGGTTGAATAGAAGAAGCGtttcaaaatatcataaaACGACCAACGACGGTGAAGAATGTTCGAGCGTGATCGGTATAGATTGCGAGCAGAGTTTAACGAATGTAAATACGGCCAACACGAATATGGAGAGTTTATCTTGGTTGTCGAGAAAGTCGCAGTCACACTTGCACTCCGAGTCGAGGTTGAGGTCTGGGTCAGGGTCAGGGCCAGTTTCTGGGTCTGGGTCGCGGTCGCAATCGCAGTTTCAGCAGCAATCGCTAAAGCTATGTCCACAGCAACAGCAACCACCAAGTActggcggcggtggcggcggcggcggcggcggcggtggtgaCTTGGATATGGTCGCCGCGTACAAGAAAATTGTCAACACGGTTGCCGGGCCTAGTTGCTTGTATCGCTGCGGcgtttgtttggaaaaattttccacaaaagaCGAATGCATTGGACATATGATGTCGTCGCATACGCCACCTTCATCATTGTGCAACGAAAACGGTACCCCTAGGTCGGTCAGCTTCGACGtcgtttgtaaaaatggatcAGAATGTAATACTGCAACCGCCACTACCACTACTACCACTATCGCTGCTGCCGCCCCCGCCcgctcctcctcctcctcctacTCTTCCTGTTCGAACGACGACGACACCAACGAATACGAAAGCAAAGAATTGGCAGCCGGTGACCAGCGGAAATACAATCGCGGTGGCGGTGACTGTAGCGGTAACAGCAGCAAGAGCAAATACCAAAAATCGATCAACGAAACGTCGTTCAAGTcgcgtcgaaaaattttggctatcgattcgtttttcaaagaaatgagaaaaacgtgTTCGAGGTATAGATGCGACGCTTGCGGTCGACTGATGATGTCTTGGTTCGCGTTTAAAAGACATGTACGCGAACACCGAGAAACGGACGACactgccgccgccgccgccactgTCTCCGCCGTCCGCGGCGCCAGCTCCGCGGCAAAACCTTTTATCGGCTACTGTAAAATATGTAACAAATTAGTCAAGCATTTTCGGCGTCACAATATGTACCATACTATCGTTAAGTCTATAACGAGGATCAGATGCGAAGTAGACGACGTGTACCAGAATGATGAAGGCGAAAGTAATTGCGCTGTCGTGGACGATTTTATCGAACTGTTGGTGGTTCACCCGGAAGAGATGGTCCCAGTTGACGTGAACGGTATGTTGGACGATACGCCGCCGCAACATATCATTCGAGCTGATGCAGATGAAAACGACAAAACGACGCCGGCTTGGGCTTCGGCTTCGGCGACCGTAGACGAAATAATGGgctcgccgtcgtcgtcgccatCTCCGCATCTGCTGAGACGTTTCAAAGAAGAGCACGACGATGACGACCACCGTGTAGTAGTAGAAGAACAGGAAGTCGAAGAAGTAGAAGAAGGAAGAAAACATGCGATTGTTACTGCGCCTATCGCTGACCAACAAACGCTGCTGCTTATAGAAAACAATGGCTACGAAGTAGAAGGCaatggcgacgacgacgacgacgtggtCAAATTTAGCAACGCTGCCACCTTGGCTGTGGCCGTTAAAGAAGAGCCGAAAGAGATGCGTTTTGCCaacgactacgacgacgacgaagctaCCATAAGCGACGAAATTCTGAATTTACAACAAGAAGAGCAGCACGTTACGTGGGTATTCGAAGATGCGTCGTTACGCCAAGACGAAATCGTCGGCGGAGGCGGACAAAGCCGCCGTCGTGACGTCGTCGCTGCGGCCGACAACAAgagtagaaatatttttcattgtgaCGTGTGCGATCGcgttttcaaatcgaaattcgtATTCAAATTGCATTACGCGCAGCATAAAAAATCTAACGTATGTCAGCTGTGTAATGCCTGCTTTCTCGACTCGCAAGACTTGCAAACGCATCTACATCAGACTCACTCGGGTACGAGCGCCTACGTCAACGTCAACGTCAACGTCAACGCGTACGCCAGCGCAGACGATAACGCCGCCATCTACGAAGAGGTAATGGCTTACGATTCGGAGAAGCAGTGCGACGTTTGCGGCAAAATTACGGACAACCTGAAACAGCACAAACTGTACCACGCTATAAAAGAACTGGAATACCGCAAGGCggaaaacaagaaatttttgaagaaatggttTTATTGCGAGAAATGCAATAAGAAAATCTTCTCGGAAGCGAATTACCTGTTCCACGTTGCCAAGCACAGCGGACAAGATACGGTCAACTGTAGGCAGTGCGACTACGTGGCGGTCAATATTCAAGATTACAATATGCACATTACGACGCACACGGGAGGCAAGTACTTCATCTGCAACGACTGCGAAAAATGCTTCTTCACCAGATCGGCGATATCGGACCACGTTCTCATCCATATGGACGGCACTCGCTACATGTGCGAGATATGCGGTAAACGTTTCAAAACGTCCAGATCGAACGCGCAGCACAAACTGCTGCAGCATAAAAAGTACTTCCGCTGCAACCGATGCAATCGCGGCTTCACGCACGAAGCGAAGCTCAACAGCCACTACAACATATGCAGCGTCATTAACCAAGACCAAAAAGAGTCCAAAGTCTTCGAGCCGGTCGAAAAGTTCTTTTGCAACATTTGCAACTCAAACATTAAAAGCTCGTCCGAAATATCGATACTGTTCCACAAGGCCAAGCACGAGGGCAAAGACGGCGTCCAGTGCAAGTTTTGCGCGCTACTCTGCAAGAACGCCTGCATGTACAAAAACCACCTGCTCATACATACGAACCAGCGGCCGTACTCGTGCACCCAATGCCCGAAAAGCTTTCGCACCAAAGGTTGCTTGGTGCAGCATATGCTGGTGCACGGCGACGAATACAAGTACACATGCGAGTACTGCGGCAAAAAGTCTAAAAAGCTCACTACGCACGTTAATCACGTCAACATTCACACCAATACCAAACCGTACAAATGTCCGGACTGCGATCGACCGTTTCGTCAACTCAGCGACATGAAGAAACATCGTCGAACGCACCTCAAGTACAAAAACGACTCGGCTGCGGCGGCAGCGGCAGCCTCAGCCGCAtctgccgccgccgccgccgccgccgccaccaccaccaccaccaccattgTAGCCGCTCAACTACCCAATTATCTGACTATCAAAACTGAAGTCGAAGACATGATGGCCGCCGATAATATTCAACAATTACAATTGACTTGA
Protein Sequence: MEIDESSIDVCRLCAQNDDSRSFIPLYTDDKRERIVAKQINQLVANLVAPDDGLPQMICSKCSRNVETCYSFVCNVIETQHKLKRLKRATDRKRKHASDDECGENCRLENVTLKDNDYGLNRRSVSKYHKTTNDGEECSSVIGIDCEQSLTNVNTANTNMESLSWLSRKSQSHLHSESRLRSGSGSGPVSGSGSRSQSQFQQQSLKLCPQQQQPPSTGGGGGGGGGGGGDLDMVAAYKKIVNTVAGPSCLYRCGVCLEKFSTKDECIGHMMSSHTPPSSLCNENGTPRSVSFDVVCKNGSECNTATATTTTTTIAAAAPARSSSSSYSSCSNDDDTNEYESKELAAGDQRKYNRGGGDCSGNSSKSKYQKSINETSFKSRRKILAIDSFFKEMRKTCSRYRCDACGRLMMSWFAFKRHVREHRETDDTAAAAATVSAVRGASSAAKPFIGYCKICNKLVKHFRRHNMYHTIVKSITRIRCEVDDVYQNDEGESNCAVVDDFIELLVVHPEEMVPVDVNGMLDDTPPQHIIRADADENDKTTPAWASASATVDEIMGSPSSSPSPHLLRRFKEEHDDDDHRVVVEEQEVEEVEEGRKHAIVTAPIADQQTLLLIENNGYEVEGNGDDDDDVVKFSNAATLAVAVKEEPKEMRFANDYDDDEATISDEILNLQQEEQHVTWVFEDASLRQDEIVGGGGQSRRRDVVAAADNKSRNIFHCDVCDRVFKSKFVFKLHYAQHKKSNVCQLCNACFLDSQDLQTHLHQTHSGTSAYVNVNVNVNAYASADDNAAIYEEVMAYDSEKQCDVCGKITDNLKQHKLYHAIKELEYRKAENKKFLKKWFYCEKCNKKIFSEANYLFHVAKHSGQDTVNCRQCDYVAVNIQDYNMHITTHTGGKYFICNDCEKCFFTRSAISDHVLIHMDGTRYMCEICGKRFKTSRSNAQHKLLQHKKYFRCNRCNRGFTHEAKLNSHYNICSVINQDQKESKVFEPVEKFFCNICNSNIKSSSEISILFHKAKHEGKDGVQCKFCALLCKNACMYKNHLLIHTNQRPYSCTQCPKSFRTKGCLVQHMLVHGDEYKYTCEYCGKKSKKLTTHVNHVNIHTNTKPYKCPDCDRPFRQLSDMKKHRRTHLKYKNDSAAAAAAASAASAAAAAAAATTTTTTIVAAQLPNYLTIKTEVEDMMAADNIQQLQLT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -