Pmar010036.1
Basic Information
- Insect
- Paracoccus marginatus
- Gene Symbol
- SNAPC4
- Assembly
- GCA_900065295.1
- Location
- FIZT01013340.1:1416-3323[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 1.8e-11 2.1e-08 34.4 0.0 1 42 344 387 344 391 0.91 2 5 1.4e-09 1.6e-06 28.3 0.7 3 45 398 449 398 450 0.93 3 5 3.5e-07 0.0004 20.6 0.1 1 43 456 498 456 501 0.88 4 5 2.4e-18 2.8e-15 56.4 0.5 2 45 509 553 508 554 0.96 5 5 5.5e-16 6.4e-13 48.8 1.1 1 44 573 616 573 618 0.96
Sequence Information
- Coding Sequence
- ATGGATACGTGCGAATCCGACGAAGATTCCGATAACGCCAACTGCGAGCTCGTATCTTTACTTATGAACAACAGCAGAAGCACCACCCAAGATACGGTTGACGAATCTACCGAAAAACCATCGGAATACATTACATTGTCGAATGTACCTTCCAACGACTATATCGTACCGTGCGACGACGATATTAGCCCGTATTCCTCCGAAGACGACGATAACGGTAATGAAATAATCAGAGAAATAGAATTGATTAAACCGAGTGCGACCAATGAATTGAATCAGAGCGTCAATCACGGCTTGAACGACCTCATTGTGAATTGCATTCAAGATGAAAGGATACGGAACGAGGTATTGAGCTTGAACCTTCAGCTTGaaagaaatatcgaaaaatgtaATACAGTCGCCGCCGAAGCTACAGCCGCGTTACTCGAGAAGAAAGCTCTGATCAAAGaatgtaaaataattgaagaaaagCTTCGCCAAAAACGTACCGTGGAAGACGCCGCCctgagaaaaataaagaaaagaaaaggtaAACATTGCGCAGAAACAGGACATAATCGACAAACGTACTTTTGTCGCTTCGGTATACCTTATTTTAAAGATAAAGACCGGTACCCAGCCGAATTCAATCGCGACATCAGGGAAATGAATAGTCGTAATCAAATCATACTTTATAAATTACCTAAAACgcgtagatttttgaaaaaagacgcTCAAGTATTAGACTCGTTGGTTTTGCAGCAGTTGAAAGCTCAACGTATTAATCAACTTAACGGATATTTGAAAGATGTAAACAAGAAAATTCAATCGCTTCTCGAAGCAGACGAATGCGACGATGAATTATTAGAacgcaaaagaaaaatattagacTCGATAAAACTTACTTCGAAAATAACCAACTTGAACGACATTAAAGACTGGAATTTGAAAGTAGATTTCTCAACGTTAATGAAAGACGATAGTTATCATAGGTTCAACGCCGAAGATTTTGAAAGGTTATGGAATTTACTAGCCAATCCTAATCTATCCCGGGAAGATTTCACAGCGGAAGAAACAtccaaattgaaagaattagCCACCAAGTACGGCGCCCAAGATTGGGATAAGATAGCCCAACAGTTAGGTACCAATAGATCGGCCTTCATGTGTTTTACCAAGTACGTCTCGGTGATAAAGAAAggtaaaaatataccttggacCGAAGAAGAAAACCAATTGCTGCGTAAACTCGgagaaaaactacaaaatgCCGAAAAACCCGGATCCATTTATAATTCGTGGAGAAATATCCGCAGGCATTTTCCTAATCGAACATACAACCAAATACACGCTCACTGGACCTACGTCTTGGCTCCTCAATTGAAGAAAGGTCGTTTCACCAAGAAAGAACGTATCGCTAttgagaaatataaaaaacaaGGTAAAAATTACAGTGAAATCGCCAAACTTCTCGGCGGTACTCGATCTTGTGTCCAGATTCGATCTCACTGCGAAATGAATGTGCCTAACAGGAAAGTTAAATCCGGTTCGTGGACCAAGGATGAAGAAAATACGCTACTCGAGCTGATCAGAGAATACGGCGATAAAAACTGGGTTAAAATTagcgaaatgatgaaaaccaGAACGAGGGTTCAGTGTAGATTGAAATACAACCAAATGAAAAGTAATTCGAGTAGTAATTCGCGTAACGAATCATCTGAGGAAAATCTTCTGCGGAAAGGACGATGGACCGAAGAGGAAACCGAGCTGTTTACCAAATTATTCAAGGAGCACGGTCATAGATGGGCCAAAATTAGTAAACTTATGAAAACCAGGTCTAAAATGCAGTGTGCGGTCAAGTACAAGAATGAATTCAAGCCGAAAGAACAAAAATCTGGTGGTTCTGATGGTAAAGAAAAGACctcgtga
- Protein Sequence
- MDTCESDEDSDNANCELVSLLMNNSRSTTQDTVDESTEKPSEYITLSNVPSNDYIVPCDDDISPYSSEDDDNGNEIIREIELIKPSATNELNQSVNHGLNDLIVNCIQDERIRNEVLSLNLQLERNIEKCNTVAAEATAALLEKKALIKECKIIEEKLRQKRTVEDAALRKIKKRKGKHCAETGHNRQTYFCRFGIPYFKDKDRYPAEFNRDIREMNSRNQIILYKLPKTRRFLKKDAQVLDSLVLQQLKAQRINQLNGYLKDVNKKIQSLLEADECDDELLERKRKILDSIKLTSKITNLNDIKDWNLKVDFSTLMKDDSYHRFNAEDFERLWNLLANPNLSREDFTAEETSKLKELATKYGAQDWDKIAQQLGTNRSAFMCFTKYVSVIKKGKNIPWTEEENQLLRKLGEKLQNAEKPGSIYNSWRNIRRHFPNRTYNQIHAHWTYVLAPQLKKGRFTKKERIAIEKYKKQGKNYSEIAKLLGGTRSCVQIRSHCEMNVPNRKVKSGSWTKDEENTLLELIREYGDKNWVKISEMMKTRTRVQCRLKYNQMKSNSSSNSRNESSEENLLRKGRWTEEETELFTKLFKEHGHRWAKISKLMKTRSKMQCAVKYKNEFKPKEQKSGGSDGKEKTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01472394;
- 90% Identity
- -
- 80% Identity
- -