Pmar009555.1
Basic Information
- Insect
- Paracoccus marginatus
- Gene Symbol
- kn
- Assembly
- GCA_900065295.1
- Location
- FIZT01033306.1:4006-10400[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.8e-126 1e-121 407.3 22.2 209 567 18 371 9 390 0.83 2 2 0.078 1.6e+03 -2.8 4.8 457 525 364 433 362 435 0.70
Sequence Information
- Coding Sequence
- ATGGTCGCCGCTCTATTatgccgccgcgccgccgacCAACTTTactacgcgtacgTTGTAATTTCGACTCAAGTCAGCGTCGAAGGACCTCTGTTAGCCGTCTCCGATAACATGTTTGTACATAATAATTCAAAACACGGTCGTCGAGCCAAAAGATTAGATCCTTCAGAAGGACTATATCCTCCGTTACCACTAGCCACTCCTTGTATAAAAGCGATCAGCCCCAGCGAAGGCTGGACGACTGGTGGTTCGACCGTCATCATCATTGgagatcattttttcgaaggcCTGCAAGTAGTCTTTGGAACACACTTGGTGTGGAGTGAGTTGATAACGCCGCACGCGATCCGAGTTCAAACACCACCGCGACACATACCAGGAGTGGTCGAAGTAACATTATCGTATAAGTCAAAACAATTTTGCAAAGGATCCCCCGGTAGATTTGTTTATGTCTCGCTGCAAGAGCCGACCATAGATTACGGTTTTCAAagacttcaaaaattaatacccaGACATCCCGGCGATCCGGATAAATTACCAAAGGAAATAATTCTAAAACGGGCTGCTGATTTGGCAGAGGCGCTTTACAGCATGCCTAGGAACAACCAGTTCTCCATATCGGCGCCTAGGTCGCCTACAAACTCAGGTTCGATGGCATCTTCCGGTTTCAACGCCTACACCGGTCAATTAGCCGTTACAGTCCACGAAAACGGCACAGGTCAATGGACAGAAGAGGAATTCGCCAGAGGCCAAAGTAGCAGCGTGTCACCGCGAGGTGGCTACGGATCGAGCGCTTCGACGCCTCACTCTTCCAACGGCGGGGGCTCTTACAACAACGGCAACACTAACGGGGGAGGCGGAGGCGCTACTCCTAGTGGTACGATACCCTCAGCAGCCTATAACGGTTCGTCCAACTCGACTGCCAATTCAAATCTAGGATCACCGACCGGAGGATCGTTGTTCAATTCTTCGTCCATGGTACCTTGCGATAGTTACTCCAATTATAATCAACATTACGGTACTAACGACAACGAAGCCAATACAGCCAAAGAGAAGAGCGCTTTTTTGCCAGTCACCAGAGGGTCGTCGCCGTCGCCCGTCTCGTCCTCCCAGTCTGTACCGCAGCATATACCAAATATGTCGTGGCATCATTTGACCGTGCATTCTTTAGTCTCGATCAGCAACGTAGGAGTCGGTAGCGGAGGTAGCCTGGTATCCTCTCCATTCGCCACAATGAATCCATTTGGATTAACCACGTGCAATCCTCAAGCTTACACGTCGTCCGCGTTAGTAAGCTCGAGTAAATAA
- Protein Sequence
- MVAALLCRRAADQLYYAYVVISTQVSVEGPLLAVSDNMFVHNNSKHGRRAKRLDPSEGLYPPLPLATPCIKAISPSEGWTTGGSTVIIIGDHFFEGLQVVFGTHLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSLQEPTIDYGFQRLQKLIPRHPGDPDKLPKEIILKRAADLAEALYSMPRNNQFSISAPRSPTNSGSMASSGFNAYTGQLAVTVHENGTGQWTEEEFARGQSSSVSPRGGYGSSASTPHSSNGGGSYNNGNTNGGGGGATPSGTIPSAAYNGSSNSTANSNLGSPTGGSLFNSSSMVPCDSYSNYNQHYGTNDNEANTAKEKSAFLPVTRGSSPSPVSSSQSVPQHIPNMSWHHLTVHSLVSISNVGVGSGGSLVSSPFATMNPFGLTTCNPQAYTSSALVSSSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01262250;
- 90% Identity
- iTF_01262250;
- 80% Identity
- -