Basic Information

Insect: Papilio xuthus
Gene Symbol: stc
Assembly: GCA_000836235.1
Location: NW:4660471-4671427[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2 1.4e+04 -4.3 1.6 15 19 468 472 467 472 0.81

2 15 0.12 8.8e+02 -0.2 0.8 4 10 502 508 500 508 0.91

3 15 3.6e-05 0.26 11.0 18.1 4 19 516 531 514 531 0.93

4 15 4.6e-08 0.00033 20.3 14.1 1 19 567 585 567 585 0.97

5 15 7.6e-06 0.055 13.2 12.2 1 19 626 644 626 644 0.99

6 15 2.3e-07 0.0016 18.1 13.8 1 19 685 707 685 707 0.88

7 15 2 1.4e+04 -5.3 2.2 6 10 737 741 737 741 0.94

8 15 0.015 1.1e+02 2.7 7.3 1 11 747 757 747 758 0.93

9 15 0.042 3e+02 1.3 0.3 4 10 762 768 761 769 0.93

10 15 3.6e-06 0.026 14.2 14.0 3 19 776 792 774 792 0.92

11 15 2 1.4e+04 -8.4 6.9 7 11 828 832 821 833 0.74

12 15 0.00048 3.4 7.5 9.4 10 18 839 847 836 848 0.92

13 15 1.6e-08 0.00012 21.7 12.7 1 16 884 899 884 907 0.90

14 15 0.012 84 3.0 10.9 1 18 914 936 914 937 0.80

15 15 0.46 3.3e+03 -2.1 0.2 8 12 953 957 952 957 0.81

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2	1.4e+04	-4.3	1.6	15	19	468	472	467	472	0.81
2	15	0.12	8.8e+02	-0.2	0.8	4	10	502	508	500	508	0.91
3	15	3.6e-05	0.26	11.0	18.1	4	19	516	531	514	531	0.93
4	15	4.6e-08	0.00033	20.3	14.1	1	19	567	585	567	585	0.97
5	15	7.6e-06	0.055	13.2	12.2	1	19	626	644	626	644	0.99
6	15	2.3e-07	0.0016	18.1	13.8	1	19	685	707	685	707	0.88
7	15	2	1.4e+04	-5.3	2.2	6	10	737	741	737	741	0.94
8	15	0.015	1.1e+02	2.7	7.3	1	11	747	757	747	758	0.93
9	15	0.042	3e+02	1.3	0.3	4	10	762	768	761	769	0.93
10	15	3.6e-06	0.026	14.2	14.0	3	19	776	792	774	792	0.92
11	15	2	1.4e+04	-8.4	6.9	7	11	828	832	821	833	0.74
12	15	0.00048	3.4	7.5	9.4	10	18	839	847	836	848	0.92
13	15	1.6e-08	0.00012	21.7	12.7	1	16	884	899	884	907	0.90
14	15	0.012	84	3.0	10.9	1	18	914	936	914	937	0.80
15	15	0.46	3.3e+03	-2.1	0.2	8	12	953	957	952	957	0.81

Sequence Information

Coding Sequence: ATGTCTGAGTGGAATAATTCTTACGGCTATAACAACCAATTCCAAGTGCCGCCTAATTCATGGAATCGAGATTTAAATGGGCAATATGTAAATCAACCATACTATGACAACAGACAATATGAGTCAAGCAACcaatatgtaagttttaatgaatttttaacacaaatgcAGGGTAATGGTGTTCCACAAAATAATGCTTCTAATTACAATAATGTACAGTACCAAGCATATCCAACTAACCAGTACAACTACCAAAATGTACCAACACAAAATCCACAGATGGAATTTGGTTATGGACACCATAACCCTAATGCAGGTAATACTGTAGACACTTATTCAGTTAATGTTCAAAATCAATACAACCAATCAGTACCCGAGTTAAATACTTATTCAAATGAAGTTGTAATGAATTCAAAATTGACACCAACTGCAACAGAATTTGTACCAAAATGTTCTATTAATGTGGCATCTACTTCTCAAAGTACTTCACAAGAAACTTCAGTTACAAAAGACGCACCAGATAACAGAAGCGGTAATTCTAAATCATCAGAAAGCAATTGGAGAGAAAGACCTAGCAACAATGAAACAGCTAACTCACAAGGTGAAATGAACAATTTTAGTCggtatcaaaaaaattataaaaatacagaagGTAATCGTAATCGTGAGTCTAATAATCGTTAtgaaaataaacgtaataatGAATCAAACCAAGAATTAAATGGGCGCTACCGTAATGGACATAGTAGTAATAATTATCAATCAAACCAACAAAAAGAATCATCGGTCCAGAAAGAACCAGAAAACTCAACTAATGAGACCTCCAACCATCAAAACGAAAATCAACGAAATTTCGAAACGGGAAACCGAAACGAAACAAGAAGATAtgcaaatgaaaataatcaatcaaaatcaaattctaaatcaaaaaataaagattcgGACGCAGGTCGTACTTTCTATAACagttctattaataaaaatagtcaaGATGTTAGGAATGGTAGAGGGGAAAGTTCTGGAAGAAATCGAAACTGGATTGGCAGTCAACGCGTCCGGACAGTAGAACGTAATAATGTTGAAGATGAACAATATGCTAATACTTACATGCATTATAGAGATGAAAGAGTGGAACGAGTAGCAAATAATAAGCATGAAAAAACCGCTAGTCCAGCAAAAGGAAGAAATAAGCCAACTAATGACTCCGGAGGCAACACCAACGTGACACAACGTGAGCGCCTCACTGAACAATTAGACAAGGGTACTTTAGAATGTCTGGTGTGCTGTGAAAGAGTCAAACAGACTGATTCTGTATGGTGGTGTTCAAATTGTTATCATGTTTTACATCTTAGATGCATAAGAAAATGGGCCATAAGCAGCTTAGTTGAAGGCAAATGGAGATGTCCGGCATGCCAAAACACGAATGAAGACATCCCAACAGAGTACCGTTGCATGTGCGGTGCTGTTAAATCACCAGAGTACTCACGTGGCTCGGTCAGTGCTCACACATGTGGCAAGTCGTGCCGTCGACCAAGGAACTGTCCACATCCCTGTACTTTACTCTGTCATCCTGGTCCCTGTCCACCTTGCCAAGCGACGATAAGCaaacAATGTGGGTGTGGTGCGGAGACTCGTTCGGTGCTATGCAGCAGTAAGTTGGCGCAGCTGTGCGGTCGTGCGTGCCGTCGCAAGCTCAGCTGTGGCGTACACGAGTGTCAAAGAGAGTGCCACGAGGGACCCTGTGATGAATGCACAGAAATTGTCACACAagTGTGCTACTGCCCCGCGGCTAAGACGCGGTCAGTACCGTGCACGTCGGACACGAGTGGCGAGCAGGCGTGGTCGTGCGGCGCGGCGTGCGCGCGCGTGCTGTCGTGCGGCGCGCACGTGTGCCGGCGTGTCTGCCACGCCCCGCCCTGCGCGCCCTGCCCCCTGCGCCCTGACAACGTGCGCTCCTGCCCCTGCGGCAACACTAAgaTAGAAAAGGATCAACGGAAATCCTGCACCGACCCGATTCCTCTATGCGGTAACATCTGTGCCAAGCCATTGCCCTGTGGTCCGGAGGGAGATAAACacttttgtaaacaattgtGTCATGAAGGTCCGTGTCCGACTTGTCCCGATAAGACTTTGTTGCCGTGTCGCTGCGGACATTCGAGCCGAGAGGTGCCCTGCTCAGACCTCCCCGACATGCTGAACAATGTCTTCTGCCAGAAGAAATGTAACAAGAAGTTGTCTTGCGGTCGTCATCGTTGCCGCACTGCTTGTTGCGCGGCGCAGTCGCACAGATGCGCGGTGGTGTGCGGACGCACGCTGTCCTGTCAGCTGCACCGCTGTGAGGAGTTCTGTCACACCGGACACTGCGCCCCCTGCCCCCGCGTCAGTTTTGAAGAGCTGCATTGTGAGTGTGGCATGGAAGTGTTATTGCCACCAATCAGGTGCGGAACACGTCCGCCCGTGTGCCACGCCCCCTGCCGGCGCGAGCGACCCTGCCACCACCCGCCGCACCACTCCTGCCACACCGGAGACTGCCCGCCCTGCGTTGTTCTCACCACTAAGATGTGCCATGGAAAACATGAgGAGCGGAAGACAATACCGTGCAGCCAAGAGGAGTTCTCGTGTGGGTTACCGTGTGGCAAGCCCTTACCATGCGGTAAGCACACCTGCACGAAGACCTGCCACAAGGGACCCTGTGATACTGacaaATGTAAGCAAGCGTGCACGGAGAAGCGCGCAAGCTGCGGACACCCGTGTGCGGCGCCCTGCCACGTGGACAACGGCGGAGTCTGCCCCAGCGCCGCGCCCTGCCGCCGCCTCGTGCGTGCCACATGCGCCTGCGCACGCCGCTCAGCAGACAGGCCCTGCCATGAGAACGCCAGGGATTACGCTAAAATGATGAGTGCGCTGGCAGCTTCGAAAATGCAAGAGGGAGCCTCCCTGGACTTGTCTGAAGTGCATCGCCCCGGAGCTATGCTGAAGacTCTAGAGTGCGACGACGAGTGTCGTATGGAGGCGCGCAGCCGGCAGCTGGCGCTGGCTCTGCAGATCCGCAACCCTGACGTATCCGCCAAACTAGCGCCACGCTACAGCGAACACGTGCGCTCCACTGCAGTGCGCGAGCCCGCCTTCGCACAGAACGTGCACGACTCCCTCACTGAGCTAGTGCAACGCGCCAAGAAGTCTAAGCAGAAGACGCGCGCGCACTCTTTCCCATCGATGAATCGTCAGAAGCGTCAGTTCATCCATGAGTTGTGCGAACACTTCGGCTGTGAGAGCGTCGCATACGACGCAGAGCCCAATCGCAATGTCGTCGCCACCGCTGACAGGGAGAAATCGTGGTTGCCAGCGATGAGTGTGCTAGAAGTGCTGGCGCGGGAGGCAGGCAAGCGGCGCGTACCAGGGCCCGTGCTGCGCGCGCCCGCCGCACCTCCGCCCACGCCTGCGCTCGCCACGCCCACTACATCCGCCAGCAGAAGTACCGGAGGCTGGGCAACATTGACATCGACCAATGCGTGGGCGGCTCGCAGTCAGCCCGCGCGCTCCGAGCCCAAGATTGACTACTTTGATAACCCGCCTGATAACTAA
Protein Sequence: MSEWNNSYGYNNQFQVPPNSWNRDLNGQYVNQPYYDNRQYESSNQYVSFNEFLTQMQGNGVPQNNASNYNNVQYQAYPTNQYNYQNVPTQNPQMEFGYGHHNPNAGNTVDTYSVNVQNQYNQSVPELNTYSNEVVMNSKLTPTATEFVPKCSINVASTSQSTSQETSVTKDAPDNRSGNSKSSESNWRERPSNNETANSQGEMNNFSRYQKNYKNTEGNRNRESNNRYENKRNNESNQELNGRYRNGHSSNNYQSNQQKESSVQKEPENSTNETSNHQNENQRNFETGNRNETRRYANENNQSKSNSKSKNKDSDAGRTFYNSSINKNSQDVRNGRGESSGRNRNWIGSQRVRTVERNNVEDEQYANTYMHYRDERVERVANNKHEKTASPAKGRNKPTNDSGGNTNVTQRERLTEQLDKGTLECLVCCERVKQTDSVWWCSNCYHVLHLRCIRKWAISSLVEGKWRCPACQNTNEDIPTEYRCMCGAVKSPEYSRGSVSAHTCGKSCRRPRNCPHPCTLLCHPGPCPPCQATISKQCGCGAETRSVLCSSKLAQLCGRACRRKLSCGVHECQRECHEGPCDECTEIVTQVCYCPAAKTRSVPCTSDTSGEQAWSCGAACARVLSCGAHVCRRVCHAPPCAPCPLRPDNVRSCPCGNTKIEKDQRKSCTDPIPLCGNICAKPLPCGPEGDKHFCKQLCHEGPCPTCPDKTLLPCRCGHSSREVPCSDLPDMLNNVFCQKKCNKKLSCGRHRCRTACCAAQSHRCAVVCGRTLSCQLHRCEEFCHTGHCAPCPRVSFEELHCECGMEVLLPPIRCGTRPPVCHAPCRRERPCHHPPHHSCHTGDCPPCVVLTTKMCHGKHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCTKTCHKGPCDTDKCKQACTEKRASCGHPCAAPCHVDNGGVCPSAAPCRRLVRATCACARRSADRPCHENARDYAKMMSALAASKMQEGASLDLSEVHRPGAMLKTLECDDECRMEARSRQLALALQIRNPDVSAKLAPRYSEHVRSTAVREPAFAQNVHDSLTELVQRAKKSKQKTRAHSFPSMNRQKRQFIHELCEHFGCESVAYDAEPNRNVVATADREKSWLPAMSVLEVLAREAGKRRVPGPVLRAPAAPPPTPALATPTTSASRSTGGWATLTSTNAWAARSQPARSEPKIDYFDNPPDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01142814;
90% Identity: iTF_01144986;
80% Identity: -