Pxut000925.1
Basic Information
- Insect
- Papilio xuthus
- Gene Symbol
- pnr
- Assembly
- GCA_000836235.1
- Location
- NW:5734372-5775391[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.2e-18 1.1e-14 53.3 3.8 1 35 115 148 115 149 0.97 2 2 4.3e-18 6.9e-15 54.1 6.0 1 34 169 201 169 203 0.98
Sequence Information
- Coding Sequence
- ATGTTCGGCGCGGGGGCTGGAGTGGGCGCAGGCGCGGGCGGGTACGGCGAGGGCGGCGAGGCGTGGGCGGGCTACGTGGGCGGCGGGCGGCTGCAGCAGTATGCCCACTTCGCTCCACACCAGAACGTGTGGCACCACCATCCCGCCGCGCACCACGACTCATACGGTAGTGGAAGTGTGGGCGGCGTGGGCGGCGTGGGCGCCGTTGGCGGAGTGGGTGGCGTGGGCGGCGCCCTCTACGGCCAGAACGTTGTGATGGGCTCGTGGTGCGGGCCCTACGATGCCCTGCAACGCCCTCCGGCGTACGATGGCGTGCTGGAGGCGTACGAGGAGGGCCGCGAGTGTGTCAACTGTGGCGCCAACAACACACCACTGTGGCGCCGCGACGCTACCGGCCACTACCTCTGCAACGCGTGCGGCCTCTACCACAAGATCAACGGAGTCAACCGGCCGCTCGTGAAGCCCAGCAAGCGGCTGTCTGCGGCGCGGCGACACGGCCAGTGCTGCACCAACTGTGGCTCTCGGAACACCACGCTGTGGCGGCGCAACAACGACGGCGAACCCGTATGCAACGCGTGCGGCCTCTACTACAAGCTGCACGGCATCAACAGACCTTTGGCAATGAGGAAGGACGGCATCCAGACGAGGAAGAGGAAACCGAAGAAGTCCGCGAGCGGCGCCAAGCCCCCTCAGGACAACGTAAAGAAGGACGAGCACAGCTCGCCGGGCATTGACGAGAGCAAACCAAACGTGCCGGAGGCGCTCCCGCTGACCGCGGGCAGTGCGAGCGGCGCGGGGAGCGTGGGGCGGCCGCGCAGCGAGACCAGCAGCACGCCGGGCGCACACACCCACGTGCACGCGCACGCACACTCTCACGCGCACGCGCACGGGCACGCGCAGACGCACGCACACGGACAGCAGTACGGGCTGGGCGTGCCCGCCCCCGCCTTCCTCTCGAACCCTTCGCTGTTCAACATCAAGAGCGAGCCGAGCGCGGCGGGCAGTTACGAGGGTTACGCGCACGCCGCCGCGCCGTACCACTCCCAGCAGCACTACCTGCACGCGCTACAGTACGGGCTCGGTAACGGCGAGGAGGAAGAGGGCAGCGGTTTCCTGCACCAGCGCAACGTCACCGCGCACGCCAAGCTCATGGCTTCCACGTAG
- Protein Sequence
- MFGAGAGVGAGAGGYGEGGEAWAGYVGGGRLQQYAHFAPHQNVWHHHPAAHHDSYGSGSVGGVGGVGAVGGVGGVGGALYGQNVVMGSWCGPYDALQRPPAYDGVLEAYEEGRECVNCGANNTPLWRRDATGHYLCNACGLYHKINGVNRPLVKPSKRLSAARRHGQCCTNCGSRNTTLWRRNNDGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKSASGAKPPQDNVKKDEHSSPGIDESKPNVPEALPLTAGSASGAGSVGRPRSETSSTPGAHTHVHAHAHSHAHAHGHAQTHAHGQQYGLGVPAPAFLSNPSLFNIKSEPSAAGSYEGYAHAAAPYHSQQHYLHALQYGLGNGEEEEGSGFLHQRNVTAHAKLMAST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01495453;
- 90% Identity
- iTF_01141313;
- 80% Identity
- -