Pxut000714.1
Basic Information
- Insect
- Papilio xuthus
- Gene Symbol
- GATA-B
- Assembly
- GCA_000836235.1
- Location
- NW:5811365-5828288[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-17 1.7e-14 52.8 3.9 1 34 248 280 248 282 0.97 2 2 5.1e-19 8.1e-16 57.0 4.9 1 34 314 346 314 348 0.98
Sequence Information
- Coding Sequence
- ATGCTGCACGACGCCTGGCCCGGCGCCTGGCACCGCGCCGAAACCATCGAGCTGGACGCGCTCATCGCGGAGGTTAACAACAACTGTATGAAAGAGGGCGAGGCGGAGTGCGGCGACAGCCCGCCCCCGGCTGCCTGCTACCAGGAGCTGCGGCCGGCACACGCGCGCGACATGCAGCCCTACGCGCTGGACGAGCCGCTCTTCAAGGGCGAGTATGCGCGCGCGCGCAGCCCCGAGCGCAGCCCGCCGCGCCTACACTACGAGCCCTACGCACCCCCGCCCGCTTACGGCCACGAACACCACGGCGACGGGTCGGGCGCGAGCGGCGGAGCGGGGGTGGGCGCAGGTGGTGGCGCAGGAGCGATGTATGCGCGGTGCGGGTACGCCGCCGGCTCACCCTACTTTGGCAACGGCGCGGACTTGCCGCAGGCGCAAATTTGGACCTCAAGCGCGGGTGGGTCGCCAAACTACAGCAGCAGCGTGTTGGAGGAGTATGAGCAGGCGGAGAGCGAGGGCGCGAGCGGGAGCGCAGGCGGCGGAGCGGGAGGCGCGCTGCCCGCTTTCAGCGCGCGCTTCGGCAGCGCCTTCGTGCACCGGCAGCCCGCGTACGCGCCGCAGCAGCTGGCCGCCGGCTACCCGCACCAGGAGGCGTGGGCGCTGGACGCGCGCCGGCCGCAGCTGTCCGCCGCCGCCAGCCTCAGTGCCATCGAGATGGCGGAGATTTACACGGTCGGGCGCGAGTGCGTCAACTGCGGCGCCATTCACACGCCGCTGTGGCGGCGCGACGGCACCGGCCACTACCTCTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGTCCGCTGAAGCAGCCCCGGCGGCTGGTACGTCAGCGGCACGCGGCCGCCCCGCCCGCGCCCGACATGGGCAGCAAGCGGCCTGGACTGACGTGTAGCAACTGCGGCACCTCCACCACGTCGCTGTGGCGGCGGAACGTGCACGGTGAGACCGTGTGCAACGCTTGCGGCCTCTACTACAAGCTGCACGGCATCAACCGCCCTCTCGCCATGAAGAAGGACTCTATACAGACGAGAAAGCGAAAACCCAAGAATTCTATGAAAGGAGAAAGAAATCTCAGTAAAGGCAATTCGCACGGTACGCACGGTGTGCATAGCTCGCACGGCGCGCACAACACGCACGGCACGCACGGCGCACACGGCGCGCACACGCCGCACGCCACCACCAACGCAGTGCCCTCCACTGTCAAACTGGAGAACATGTTGGAGAGCGGTCCGGGAGTAATCAGCGTGGGCAACGCGGAGAGCCGCGCGGCGCTGGCGCTCGGCTACTACGTGCAGCACGCCATCAAGATGGACGAGCCACCGCCCGCGCACGCCCACTCCGCGCACGCCGCCCACGTCGCGCACGCAGCCCACGCCGCGCACATGTACGAGGAAGAGTACCGTCGAGCCGAGAGCGGCGAGCGCGGCGCCGCCGTTTCGCTGGCCAGCTGA
- Protein Sequence
- MLHDAWPGAWHRAETIELDALIAEVNNNCMKEGEAECGDSPPPAACYQELRPAHARDMQPYALDEPLFKGEYARARSPERSPPRLHYEPYAPPPAYGHEHHGDGSGASGGAGVGAGGGAGAMYARCGYAAGSPYFGNGADLPQAQIWTSSAGGSPNYSSSVLEEYEQAESEGASGSAGGGAGGALPAFSARFGSAFVHRQPAYAPQQLAAGYPHQEAWALDARRPQLSAAASLSAIEMAEIYTVGRECVNCGAIHTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQPRRLVRQRHAAAPPAPDMGSKRPGLTCSNCGTSTTSLWRRNVHGETVCNACGLYYKLHGINRPLAMKKDSIQTRKRKPKNSMKGERNLSKGNSHGTHGVHSSHGAHNTHGTHGAHGAHTPHATTNAVPSTVKLENMLESGPGVISVGNAESRAALALGYYVQHAIKMDEPPPAHAHSAHAAHVAHAAHAAHMYEEEYRRAESGERGAAVSLAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01139338;
- 90% Identity
- -
- 80% Identity
- -