Pxut000106.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Papilio xuthus
Gene Symbol
ZFX
Assembly
GCA_000836235.1
Location
NW:821677-831065[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 4.4 2.5e+02 2.1 0.3 2 23 6 27 5 27 0.94
2 13 0.0047 0.27 11.5 0.7 1 23 996 1019 996 1019 0.92
3 13 7.5e-05 0.0043 17.1 2.3 2 23 1122 1143 1121 1143 0.97
4 13 0.00045 0.026 14.7 1.9 1 23 1149 1171 1149 1171 0.98
5 13 0.0039 0.22 11.7 2.4 2 23 1178 1199 1177 1200 0.94
6 13 1.4 82 3.7 1.6 5 23 1213 1231 1211 1231 0.97
7 13 0.0079 0.45 10.8 3.5 2 23 1237 1259 1236 1259 0.96
8 13 0.018 1 9.6 0.1 2 23 1276 1296 1275 1296 0.96
9 13 1.8e-05 0.001 19.1 0.7 1 20 1302 1321 1302 1324 0.92
10 13 0.0022 0.13 12.5 2.4 1 23 1332 1354 1332 1354 0.99
11 13 0.0041 0.23 11.7 7.2 1 23 1360 1382 1360 1382 0.98
12 13 6.5e-06 0.00037 20.5 1.4 1 23 1388 1412 1388 1412 0.97
13 13 0.00074 0.042 14.0 5.1 1 23 1418 1440 1418 1441 0.95

Sequence Information

Coding Sequence
ATGGATTCGAGAGTTCAGTGCCCTGTGTGCACTCTATACTTACACAGTGGAATGACTTTGGAGTCTCATTTGGACACACATCCAAAGGATCAAGTTATAAAGGCTTTATGTAGTCTCTCAAGTAAGAACACCAATTATGGGAGTCGTACCACAACTCCTTCGCAATCTGAGCGTTCCTACCAGAGTCGATCTCGTACTCCAGCGGCAGATGACAGCATTCGGTGGATGGGCTCTCACCAGAGTTCTGATAGCGAAAAATATTGGAGAAGAACACCAAGTAGAAGTAAATTAACACCACTTTCTAATCCATCAAGAAATGTCACACCAGATATTAGAATTGGTgaagttaattttgaaaatagtcATATTAACCATGGAGGTCAGTATTCTGAAAATTGTTATACAATGAAACTAGACAAACCTCAGCAGACATATGCATCCAATGTCCGAGTAGCAGAATTTGACCAACAATACCCATATTACCCTGATCAATGTGAAGATCGGGAGATTAAATATTCTCGTAGTTTGGACTACAATACAATTGATAGTTCAGGTAATGCATTTACTTATAACATGCCTCAGCTTGCTCTGAAGACTCCTGCATCTGTTGCATCAACCTTAGTACCACCGAAAAAAAGTAGTGACCTCGTTAAGTTAATGCCCAAACCTGAGTTTGTTAAATTACTGCCAAAGTCTAATAATATTCTCTTCAAAAATATGAGCGGAGTACAATATATAGCACCAGGTGTTAATGTAGTGATGCCACCATCACCTTTTGTCCAAAAGAATGTTCAAAGTAACATGATAATGTCTGGAAATTTACCTCCAAATGCAACAATGAACACTAAAGGAGGTCAACCTATCATCCCCAATCAGTATAACCAAATGGGACCCAGTACCTTCTCTCCAGGCACTACAGTGGTCACTCAAAACTCACAGATTATATATAGAGAAATGGTTCATAACTTAGATGGTAAACCATTTATTTCAACTATGCCTAATATGCTTGGAGGTCATGACAACATGGGCAATGTCACTCAGAGTAGTTCTATATATCAGAATGTTGTAGTTGTTGACCAGTTTGGTAATACCTCATGTATGTATGCAAACCCTCAACAAATATTGCAAAAGCCTTGCAGTGCTACCATTTACCCTGACAACTCTTTACTATTAGCTAATGAACATAAGAAAAGATCTCATGATGATGTGGATtccaataaaactttaataattgaaGTTACCCCCATCAACACACCAGCTACTGAAATGAATGGTGATCCAAGTTCATCTCTTGGATCATTATCAGGCATGGATGATAACAGTAAATCAGAAGAAACTGAGCTAAAAAATGAACCTATTGGCACTACTAAGGGTCTTAAAATCCTGAGCAATATTAAAGTGGAAGTGCCAGTCCAACATAAGAAAAGTATGTTAAATACAGTAATGGATTTAACAGGAACCAATGATCAAGAATACCCTGAAAGGTCTGTTACaccagaaaaaatattaccagaTCTAGAAGACAACAATCAAAGTTTTTCTGATGAATGCACACAGCCTTCCGTAGCAAGTGGAGATAGTTTGGTGTCAAATGCTTTTTCTGTGATAAAAAATGTGGGAAATCCTCCAGCATACAAAGATTCGCCTTCCAAGTCTAGTATTGTAGGTAGCAAAATTGAAACTGAATTTTCGGATAGTTGTCCTGTACCtgatttaatatgtaatgagAAACCTTCTATATCTCCATGTAGTGAGTTATCAGAACACGGAGATAATTCTACAGATATTGTGCCATTGTCGCCTAAAGCTAACAGTAGTAGGAGTAGTCTAATGAATGAAAGTGTAGAAGAGAGTAAATTCCAACATAAGGAATCAAAAAAGAATACCCTCAGGTTGAACAATATCTATGTTAAAAAGCACAAGAAGATTCTGcagattaaaaatgcaaaaacaaatttatcacTTGACTCCTCCAATAAAAGTGAAATGGAGCCTCTACCTTCCTCTTCTATGTGTAAAACTCCAGAAAATTttagcataaataaaatacatcacACTGATAAAATGGAAAGTCCTAAAACAAGTTCCTTACATACTGTATCTATTGAGAAATTAAAGGGTAATGACCATAATGAGTTTGATGCTGACACAGAGGAGCAGTCAATGGACATAGAACctatagcgccatctagtttaaATGATTCTAATCAATTTTCCATGCATGAGGTAAAGGTAAAGGAAGAATTTAGTGCCAGTAATGAGGGTGGCTTTAGTAACCAAGGCAGGCCCTTACAGAATGTACCACAATTAGAGAGTTTGAGACCTATAAACGTGATATCATACGGTAACATGGTTCCTGGAGATTTTGATAATGATTCCAACCACAGGGAACTATTAGATTTGGAGGCTTCATCGAAGAATAAGCAATTTGTTAATATGATGAATGAAAACTATTTTGGTGATAATATTTACGCAGACTACTTCACTCCAGATCGGGTTGAATCTTTTGAGGCTCAGAAGGAATCTAATTTTAGAGAAGGGCCGAaagataatatgtatatttgggGTGAGCCTTCCCAGAAGGAATCCGAGTTTGtgttgccaaattttattcatgaGAGTTACAAGATAGCTGAGAGTAATGGGCCTGATTACTCGGAGATGGGTGAAGGAGGTAACGTTGGTATGACTGATCGTTGTGAACAGGATAGTAAAGTGGACATGCTGAGCGAGAGTCGAAGTGAAGGAGAGACtccattaaatatttgtgcaGATGAGCGCATGCCACCTCGTGGAGAGCTCAGTGGACAGGAGAGTAATGGAGATATGGAGTCACCATGGAGTGGGATGTACAATGAGGTTACACCTTCGGAGCCGTACGACCTGATGGCGCGGGAGAGCTGGGTGTCAGACGGCTCTGATGTGGACACAAATGAGAAACGGGATAAcattgAGGACGACCTTCACTTTGCGAAGAGCAGACTTCACACGTGTTCACAATGCGGTATCAAGTATCCATCACTGAAGGAGCTCCGGACACACAAGGCACTCGCCCACTCCCTGCCTACCTGCTCTAACGGGAAGACCAGCTACAGTCGCCTTGTCACTGCGAGGAGTATCAAAAAGGAGGAGAAACTGGATGAAACTGTTTTGGAAAgGAATCTCCTAACAATAGATTCAAAGGAATCGATGGCAACAACTATGCAGCAAGTGTATGATGCTATCGCAGAAGCTAAGCCAGCTATAGAAACATTAGTAAAACATGAGACAAAGAGGAAGAAGAAAGACTACATCTGTCCAACATGCAAGGTGGATCAGTTAACAGAAGTTTCGTTCAATGCCCATCTTAAAATACATCCATTGGAGTGTCTTACATGTGGAAAGTGTTTCTTCAAAAGAGGGAGCCTCGCACTACACATGAAAACGCATTTAGGAATCAAGAATTTTAAATGTGATCTGTGCGAGAAACGTTTCGTGACGCGTCAGAAGATGACTGAGCACCGCAACGTGCACACGGGCCGCATGCCCATCAAGTGCACCGTCTGTGATGACACCTTTCGAAGATATTCCAACATGGCTCAGCACAGGGACCGCCACCATTTCCAGAAGAGGGCAAAGGTCCGCGATTTCGTGTGCCACTGCGGTGCGGTGTACCACTCGCGGGCGAAGCTCCTCTGGCACAAGGAGACACACGACGCCAAGCCCAAGTCCTGCCTCTACTGCAGCGACAAGTTCGTGCACTCCTCCTCACTGACGCGTCACGTACGACGTACGCACAATGCGCACTTTCTCTCTGATAAGGTGAAGGGGAAGGAGGTTAATGTGCCTTGTCCTGTTTGTAAACAGATATACCTAAGATCGAATTTACGTGCTCACCTATTAATACACAGCGGTAAAAAGCCGTATCCGTGCGTCATATGCAACAAATCCTTCACAACCAAGTGGAATCTCAAACTGCATCGGTGGACTCATATGAGCCGGTCTGCTAAACCGTTCAAGTGCCATCTGTGTAAAGGTGCCTTTATAAGATACACGGAGTACATATCACATATGAATTCGCACAAGTCTCTAAGACCTTACACGTGTAATTATTGCGGTTGTCAGTTCatcagaaaatataattgtcaaCGTCATGTCAGAGAACACGAAATGGCAAAGAAGTTTGTCTGCAAAGTGCCGGAATGTGGGAAATCTTTTCACAGAAGTTACTATTTGTCGGAACATATGAAAGTACATAGTGGAGCGAGGCCGTTCTCGTGTAATATATGTGGGAAAACTTCAAGCAATAAATCTAACCATAATAAGCATGTGAAGATACACCATGCTAGAGAGCCCGTGGCAACTGAGGCATAA
Protein Sequence
MDSRVQCPVCTLYLHSGMTLESHLDTHPKDQVIKALCSLSSKNTNYGSRTTTPSQSERSYQSRSRTPAADDSIRWMGSHQSSDSEKYWRRTPSRSKLTPLSNPSRNVTPDIRIGEVNFENSHINHGGQYSENCYTMKLDKPQQTYASNVRVAEFDQQYPYYPDQCEDREIKYSRSLDYNTIDSSGNAFTYNMPQLALKTPASVASTLVPPKKSSDLVKLMPKPEFVKLLPKSNNILFKNMSGVQYIAPGVNVVMPPSPFVQKNVQSNMIMSGNLPPNATMNTKGGQPIIPNQYNQMGPSTFSPGTTVVTQNSQIIYREMVHNLDGKPFISTMPNMLGGHDNMGNVTQSSSIYQNVVVVDQFGNTSCMYANPQQILQKPCSATIYPDNSLLLANEHKKRSHDDVDSNKTLIIEVTPINTPATEMNGDPSSSLGSLSGMDDNSKSEETELKNEPIGTTKGLKILSNIKVEVPVQHKKSMLNTVMDLTGTNDQEYPERSVTPEKILPDLEDNNQSFSDECTQPSVASGDSLVSNAFSVIKNVGNPPAYKDSPSKSSIVGSKIETEFSDSCPVPDLICNEKPSISPCSELSEHGDNSTDIVPLSPKANSSRSSLMNESVEESKFQHKESKKNTLRLNNIYVKKHKKILQIKNAKTNLSLDSSNKSEMEPLPSSSMCKTPENFSINKIHHTDKMESPKTSSLHTVSIEKLKGNDHNEFDADTEEQSMDIEPIAPSSLNDSNQFSMHEVKVKEEFSASNEGGFSNQGRPLQNVPQLESLRPINVISYGNMVPGDFDNDSNHRELLDLEASSKNKQFVNMMNENYFGDNIYADYFTPDRVESFEAQKESNFREGPKDNMYIWGEPSQKESEFVLPNFIHESYKIAESNGPDYSEMGEGGNVGMTDRCEQDSKVDMLSESRSEGETPLNICADERMPPRGELSGQESNGDMESPWSGMYNEVTPSEPYDLMARESWVSDGSDVDTNEKRDNIEDDLHFAKSRLHTCSQCGIKYPSLKELRTHKALAHSLPTCSNGKTSYSRLVTARSIKKEEKLDETVLERNLLTIDSKESMATTMQQVYDAIAEAKPAIETLVKHETKRKKKDYICPTCKVDQLTEVSFNAHLKIHPLECLTCGKCFFKRGSLALHMKTHLGIKNFKCDLCEKRFVTRQKMTEHRNVHTGRMPIKCTVCDDTFRRYSNMAQHRDRHHFQKRAKVRDFVCHCGAVYHSRAKLLWHKETHDAKPKSCLYCSDKFVHSSSLTRHVRRTHNAHFLSDKVKGKEVNVPCPVCKQIYLRSNLRAHLLIHSGKKPYPCVICNKSFTTKWNLKLHRWTHMSRSAKPFKCHLCKGAFIRYTEYISHMNSHKSLRPYTCNYCGCQFIRKYNCQRHVREHEMAKKFVCKVPECGKSFHRSYYLSEHMKVHSGARPFSCNICGKTSSNKSNHNKHVKIHHAREPVATEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01143337;
90% Identity
iTF_01140421;
80% Identity
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