Basic Information

Insect: Papilio xuthus
Gene Symbol: Hivep1
Assembly: GCA_000836235.1
Location: NW:13098167-13109206[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.00011 0.0061 16.6 0.8 1 23 143 165 143 165 0.98

2 8 0.0028 0.16 12.2 0.8 6 23 176 195 171 195 0.90

3 8 0.0016 0.089 13.0 0.0 1 20 422 441 422 443 0.95

4 8 1.9e-06 0.00011 22.1 2.0 1 23 1198 1220 1198 1220 0.99

5 8 1.7e-05 0.00095 19.2 3.9 1 23 1226 1250 1226 1250 0.92

6 8 7.6e-06 0.00043 20.3 0.9 2 23 1649 1670 1649 1670 0.97

7 8 0.00021 0.012 15.7 1.5 1 23 1676 1700 1676 1700 0.92

8 8 0.00095 0.054 13.7 2.6 1 23 1721 1745 1721 1745 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.00011	0.0061	16.6	0.8	1	23	143	165	143	165	0.98
2	8	0.0028	0.16	12.2	0.8	6	23	176	195	171	195	0.90
3	8	0.0016	0.089	13.0	0.0	1	20	422	441	422	443	0.95
4	8	1.9e-06	0.00011	22.1	2.0	1	23	1198	1220	1198	1220	0.99
5	8	1.7e-05	0.00095	19.2	3.9	1	23	1226	1250	1226	1250	0.92
6	8	7.6e-06	0.00043	20.3	0.9	2	23	1649	1670	1649	1670	0.97
7	8	0.00021	0.012	15.7	1.5	1	23	1676	1700	1676	1700	0.92
8	8	0.00095	0.054	13.7	2.6	1	23	1721	1745	1721	1745	0.93

Sequence Information

Coding Sequence: ATGCCTCTGACACAAGAAAAACGTTTAGATAGTAACTTCGCTAACAACAATGATCAAAGTTATCTACATAAGAAGTTTAAAAAGATGGCGTCTACCATATCTGGTTTTCCTGCAAATGCACCGAAGTGTGACGAAAATCGgcaaaaagaaacaattactCTTGCTTGTAATACTTCAATCTCGAACGGAAGCATTGCAGCGGCACATCCTGAAATagagaaaattaaagataagcaAGAGGATCAGAGCGCTGACGTGGAAAACgatgtacaaattaattttaatgcagAGAACATTAGGTTAAGTGATGTAAATAATGTTGTTCAGGTAACTGGTAAAACCAGTTTTACCgaggaatttttaaataagactgAAAACCTTGAGACCGATTTTATCAGGGAATGCTACAGTGGAGGAACGGGGCGATATATGTGCccttattgtaaattatcatGTGCCAAGCCTTCAGTTCTTCAAAAACATATCAGAGCGCATACTAACGAAAGACCTTATCCTTGCATACCATGTGGATTCGCTTTTAAAACGAGATCCAATTTATACAAGCATCGAAGATCGAGAACTCATGCTCTAAGATTGCAGGGAACAGATATATCCGGTACTATAAATGAGGAGGATATGTCTGGAGGATCAGAAAGCGACACATCTATTCCGCCAACATCTCTTTCTGATACCGGTTCAGATGCTTCAGTTATACGATTGGACTACAATAGATCTAATGAGATTTCGTCACCAGAATTGACAAATGATAGTCACGCATTACCAGTAACAAGCTTCCCCacgaatgattttaataaatcaaaggcGATTTACAAACCCAAGTTTAGAGCAGCATTTTATCAAGGAATTGATGAAAGAGATAAGATAAAGAAAACGATTTCTACGAATGCCGACTTTCTTACGGAACATAtctctaaaataatatctgaTAACGAGGCCATTGTTGATGTTATAGAAACTCCTCTACAAAAGAAGTACGGTAAAATTAAGCAAATTGCtgaaagtaaacaatttttaaatgaatcggaattaaaacaagacGCATCTCcgttaaatttaactaagaataatattaattctgaTAGTTCATTTCGAAAGAGATCGCATTCTGAGAGTTTTTCACAAATTGACGACCATAAACACCCCCTCAATCCTGAAGGATCTATCATTAAGGATCTTCTCCTGAAAAGTAAGAATAATGCACTTATGATATCAGGTGAACTCATTGATGGATTAGGAGTGTTGTACGTTTGCCCGCTGTGCCAAATAATCTTTCGAAGTGTTGATAATTTAGAAACCCACAGACTTTATTATTGTAAGGGCAGCATAGGCACAAACTCAGCTTCCATGAATGCTCCACAAAAGGAAGTTAAAATGGGCAGGCCGGAAAACGTTTACACAAGAAGTAATTCTATAAACGTTCGACTACCTGAAACACAATCCCACAGTCCTAAATTAAGTCGAACAACAAAATCGCCAATTTCCAAAAGTAAGCCTGATAACCTAGTAATTCTTAAACAGGAATCGAATGAAATAATCGCACCATTGCCATCTCCTGGACCTTTATTAGGTAATACAAGGCTTGTTGATGCTAGGACACCTACGGAATTTCATAGGAAAACAGAAAATCTTAGAATTAAGTCTAAAGAAGCTAGTCCTAAAAGAAGAATAGAAAGCCATTCTGATACATTTAGTCCAAGGATGTTAGAAAATATGTCACCGCGCTCGGCAGATTTATACCCACAGTCAAAAATACGATGTGTAGACATAAACACTGGAAACTTACGTTCAATAGAGGAATTGTCATCACACATTAGACATAATTCTACTTCACTTCAAATGTTTGGTGGCGAAGTAAAAATTGTCGATCACTCTGGCAGTACTACCACTTTACGTATCGAACCAAGTAAAAACCAGTTATCGCCTATTTTAATACAACAGAATCTTTCGCCATCGAAATTTGCCTCCGAATCAGAAGCAAGCAGTGTAGTTGTGCGATCAGGACTACATTCCGGTGGTACGATTGTTCATAATCCACCAACACCGAAAGATGTCCTAGGCACGCCACAGCCTCAAAGTACTAGGATGTCAATATCAACTTCTAGTTTACAAAATTCGAATTTGCCTAACATTCACGATATTTCCCACTTTCCTTTTCCACCTTTAAGTGCTATTACAGCTTATAATCCACTTACTCTGCCACCACTTAGTCCTACCTCGTCACCAAATGGTCCTACAACAATATTACATGGTGGAAAGCTAATACCACATGTGCCAGGAATGCCGGGACCAAATACAGCGGCTGCCTTTATCGGAAGCGGCACAATGTCCCAAAAGATAACAAGTACTGATAAACACCATCCTGTTCCCATTGTCGACAACACCCAAGACTGCATACAAACAGGAAAAGTGACAGTGTCTAATTATGAAAGAGCTCTTAAAACCAGAAGTCCAGGTTCGAGATCTTTGGTTTATGAATCTGATAAATATAACCAGAACCTGGAAACCTACAAAGCCGATATACCACATTACATGACAAATATTCCcactattaaagtaaaaaatatggaaGAAGCAAATAGCCATCCAGTTGCAAAGACTTATTCCTCAAACATAGTTCGTATTGTTACTCCAAGGCAAGATCTAACAGTAAAAAGAAATTCTGATGGTATGGCCAAAATATCGgtactaaaagaaaatacaaataattctcTTGGTAggcatataaataaagatttaattcctTCAATACCGAACATAAATGTTGAAGTTAAatctgaaaatgaaattagaaattttaattttgaaaatcttataacaaaagcggaaatttataataatcaaatacaAAGTTCCTCTGAAGTGCAGAAAAACACAAATGCTCAAGAGACAGTTACGTCATCTGTCCATAATGAGAGATCGGAAACATCGTACTTCCAGAAAAACTCCGTAACGCGCCCTACAAGTGAGGATAGAAAACCTAAATTTTTGAGACCGTCCACCTTACCGTTAAAACCGGGCACGTTTACACCAAAACGACATCACGGTATAACGCCTAATGCGAACACAATGCCTTTGGTGTCTCCTGAAACCCCACGCCCGGCAAAAGCTTACGGGCagctttatttaaatggaaacGCGTATACATATTTAGGATTAAAATGTTCAACGAAAGTCTTCTATTGTACAATAAATCGTCCTCAAcctacatatgtgccaaatcAACATTTCCTATCGATGTACAGCAATTGGCAGTTACTATCTGAGCTGACGCCAGACCCGCTGGGATTGTCAGCATCGTCTGCGATGTCTTTGTATGACTCACGCCATCGACCGCAAAATGTAACCACTGCTGTGATTAAGCAGGACCTTATATTGACTCATTCATCACAATCGAATAAAAAGTCAaaggaatattataatcaacagGCAATTACATCCATTGATAGTAGAAAATCAGAAGAATCGAAACAACAGCCTTCAGACATATCATCAACGTCTAAAAAGGAGCTAACAGGTGGTTTTGAAAGTAACGAAGAATATACATATGTCCGTGGTCGCGGTAGAGGTCGTTACGTTTGTTCGGAATGTGGAATTCGCTGTAAAAAGCCGTCGATGCTAAAGAAACATATTCGCACTCACACCGATGTTCGACCTTACACGTGTACTCATTGTGCATTTAGTTTCAAAACCAAAGGGAATTTAACGAAGCATATGAAGAGTAAAGCTCATTATAAGAAATGTTGTGAATTAGGAATAAATCCGAACGAAGGCAATGAGGAAGGTTCGGAGATGACGCATTGTTCTGGAGAAACTGACGATGAAACTGATTCCGATGGTGACGAGGGAAATGAAGGGGAAACTGAATCGAGTGATACGGAGCTGTATAAGTCGCGTTTGCCTGAACATGAAGCTGCACATTGTTTGCTATCACTAGGTGGATGCCGCACTGCCACTTCTGCAACACCGGGGCTGATAACTAGTGCCAGACCTACCACTTACCCTTACACTCCTGTGGACATGGATGGCATGACATCTGACTCTAACCTGGAAAGTATTCCAATGGCTAAAACAAATTCCGTTGATGCAAGATTAGATGTCGATAACGAACCCATGGATTTAAGTCGAAATGACGTAAAAGCTCCTAACTTACCAGAAATTCCGACTGCTAAAGAATCAAGTGTCTTAGCCTCTTTAGCATCAAATACGGCAAAACTTCCGCAACAGCAAAGTCAGTGGTCTAATGGAGAACCCATGTTACATACGTATTTAACTGAACGGGCTCTCCTTGAttccaaaataaaacaaagtcaaCTTACGTCTAACTTGATTAAATTGAGAAAAATAGACATAGATAAATCGCCGTTCATTGACGCTGATGAGATATCGGAAAGCAACAATGGTCTCACTAGTAATAACATTACGACACCAATTACATCACAAGTAAACATCTCAAAACCGATCGTATCGAGTTGTAGCGAAAGTGGAGTGAAGTCATTACCTATTTCTAAAGAAGATATTCCGAGAGCCTCCATTGATGTATCGCATTCTGTAAGTTATAGTACAGAACCTAAACGGGCTAGAACTCCTAATAATAATTCTGAAAACGCCAAGCACGTTGTCTCTGAGTATCTTAAACACGCTagaattaatcttattaagaATCGCGATGAAACATACCAAAATCAAAATGATAACTCCAGTGACGAAAGCAATAGCAGTAAAATGAACACTGAGGAAAAGTCGAAAAACGATGATGTTACTATGTCGGAGTCAGAATCGTTAAAAATGCCACCCGTAGATCATGAGCCTGTTGCTCGAAAAGTTGTAATTGGTGCTGGAGGAGTCGCATTTAAAGTAACAAAGGGGAAAGAGTTTGAGGGAGCTCCATATTCACCCGGAAGATTAATGGAAGATGGTAGGAGAGTGTGTGacttttgtaacaaaacattCACTAAGCCATCTCAGTTAAGGTTGCACCTAAACATACACTATATGGAAAGACCTTTTCGATGCAGTGTTTGCGCGGTGAGTTTTAGAACTAGAGGTCATCTGCAAAAGCATGAACGATCTGGTTCACACCATAATAAGGTTTCGATGACCTCGACGTTTGGAACGGCTACATCATTCAATCCTCGTCCATTCCGCTGTTCAGATTGTAATATCGCTTTCAGAATACATGGTCATTTAGCTAAGCATTTGAGGAGTAAAATGCATGTAATGAGGcttgaatgtttatttaaacttccCTTTGGTACATTTACGGAGATCGAACGCGCTGGCGTAAGTTTAACAGACATAGACACGACGGATTGTGCGAGCTCTTTGGCAAGTTTACAGTCACTCGCTCGTAAGTTGCACGAGAAGGACCCAACCAAATTAGAGTACCGGGAACCTAACGGTGCTGCGGTGATGCCTCCTGCTGGCAGGGAGTCTTCCGAGGATGAGGACGGCGCAGTGCCCTCGGACAACGCTTGTGACAATGAGAGGGATAGTGAGATGAAAACAATGGATCATAGTGACGGTCAAGACGTTGAAACAAGAATTAATTATAGTGCCACAGATAATTAG
Protein Sequence: MPLTQEKRLDSNFANNNDQSYLHKKFKKMASTISGFPANAPKCDENRQKETITLACNTSISNGSIAAAHPEIEKIKDKQEDQSADVENDVQINFNAENIRLSDVNNVVQVTGKTSFTEEFLNKTENLETDFIRECYSGGTGRYMCPYCKLSCAKPSVLQKHIRAHTNERPYPCIPCGFAFKTRSNLYKHRRSRTHALRLQGTDISGTINEEDMSGGSESDTSIPPTSLSDTGSDASVIRLDYNRSNEISSPELTNDSHALPVTSFPTNDFNKSKAIYKPKFRAAFYQGIDERDKIKKTISTNADFLTEHISKIISDNEAIVDVIETPLQKKYGKIKQIAESKQFLNESELKQDASPLNLTKNNINSDSSFRKRSHSESFSQIDDHKHPLNPEGSIIKDLLLKSKNNALMISGELIDGLGVLYVCPLCQIIFRSVDNLETHRLYYCKGSIGTNSASMNAPQKEVKMGRPENVYTRSNSINVRLPETQSHSPKLSRTTKSPISKSKPDNLVILKQESNEIIAPLPSPGPLLGNTRLVDARTPTEFHRKTENLRIKSKEASPKRRIESHSDTFSPRMLENMSPRSADLYPQSKIRCVDINTGNLRSIEELSSHIRHNSTSLQMFGGEVKIVDHSGSTTTLRIEPSKNQLSPILIQQNLSPSKFASESEASSVVVRSGLHSGGTIVHNPPTPKDVLGTPQPQSTRMSISTSSLQNSNLPNIHDISHFPFPPLSAITAYNPLTLPPLSPTSSPNGPTTILHGGKLIPHVPGMPGPNTAAAFIGSGTMSQKITSTDKHHPVPIVDNTQDCIQTGKVTVSNYERALKTRSPGSRSLVYESDKYNQNLETYKADIPHYMTNIPTIKVKNMEEANSHPVAKTYSSNIVRIVTPRQDLTVKRNSDGMAKISVLKENTNNSLGRHINKDLIPSIPNINVEVKSENEIRNFNFENLITKAEIYNNQIQSSSEVQKNTNAQETVTSSVHNERSETSYFQKNSVTRPTSEDRKPKFLRPSTLPLKPGTFTPKRHHGITPNANTMPLVSPETPRPAKAYGQLYLNGNAYTYLGLKCSTKVFYCTINRPQPTYVPNQHFLSMYSNWQLLSELTPDPLGLSASSAMSLYDSRHRPQNVTTAVIKQDLILTHSSQSNKKSKEYYNQQAITSIDSRKSEESKQQPSDISSTSKKELTGGFESNEEYTYVRGRGRGRYVCSECGIRCKKPSMLKKHIRTHTDVRPYTCTHCAFSFKTKGNLTKHMKSKAHYKKCCELGINPNEGNEEGSEMTHCSGETDDETDSDGDEGNEGETESSDTELYKSRLPEHEAAHCLLSLGGCRTATSATPGLITSARPTTYPYTPVDMDGMTSDSNLESIPMAKTNSVDARLDVDNEPMDLSRNDVKAPNLPEIPTAKESSVLASLASNTAKLPQQQSQWSNGEPMLHTYLTERALLDSKIKQSQLTSNLIKLRKIDIDKSPFIDADEISESNNGLTSNNITTPITSQVNISKPIVSSCSESGVKSLPISKEDIPRASIDVSHSVSYSTEPKRARTPNNNSENAKHVVSEYLKHARINLIKNRDETYQNQNDNSSDESNSSKMNTEEKSKNDDVTMSESESLKMPPVDHEPVARKVVIGAGGVAFKVTKGKEFEGAPYSPGRLMEDGRRVCDFCNKTFTKPSQLRLHLNIHYMERPFRCSVCAVSFRTRGHLQKHERSGSHHNKVSMTSTFGTATSFNPRPFRCSDCNIAFRIHGHLAKHLRSKMHVMRLECLFKLPFGTFTEIERAGVSLTDIDTTDCASSLASLQSLARKLHEKDPTKLEYREPNGAAVMPPAGRESSEDEDGAVPSDNACDNERDSEMKTMDHSDGQDVETRINYSATDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01495235;
90% Identity: iTF_01148290;
80% Identity: -