Pxut012231.1
Basic Information
- Insect
- Papilio xuthus
- Gene Symbol
- -
- Assembly
- GCA_000836235.1
- Location
- NW:1760748-1764872[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.1e-09 1.4e-05 24.3 0.2 4 32 175 203 174 208 0.92
Sequence Information
- Coding Sequence
- atGGAAACTAATGCTGAAACGTTTATTTTCTTAGCTAGATGTAAATGCTGTCTTAACGAAGGTGAATTACAAAACTTATGGGAGCCATACCTATTTGATGGAGAAACGGAAATATACGGAGAAATGTTATCAGAATGTTTTTCGCTATCaccgCAAGCTGACGAACATTTGCAAAGTATAGAAATGATATGTAATTCTTGCATTAAGAGGTTAAGAGATGCTCTCAGTTTCAGAAGAGAAGTAATAGCAAGCATCCAAGTGCTAAAAGAGCATCAGGATAAAAtGTTCCTACATACAATAGCAAAAGAGGAAGAGGTAGAAACAGAGAAAGAATCGGAATATCAAAGTATTGAGTATTTAGATTTCACAGAAGGAAGTAAAGAACAGTCCagtgatgatgataatataataaatgATGAATcacaaaatttgaataaaaaaaccacCAAAGATGTTACAAAATGGCCGAAAAAGCTGCCAAAAGAGTTCAGAAATAAGACATACAAACAGTACAGTGTTAGTGCATTGAAAATGGCCATCGATGCTGTGTTAAGCGAGAGAATGACAATTGCCCAAGCTTCTGTAACTTACGGTGTGCCACGGAAGACGGTAACCGCAAAGATTCATGCGGCAAGGAATAAAAAAGAGGATAAAGATGACGaaccaaataaattttacgaaCAAGAGAAACACAATAAACTTGtagaagaaataaagataatattaacatacacAAACGCTGTACCTTATAAATCTAAAGCTTCAcgatattattgtatttattgttCCGATAGTCCAGGTTTTGAAGACGGTCAGGATTTAAGAACACACACAAGAACTAAACATATCGCAGAAAGAACATCAGGTATAGATCAAATAATGAGACCTCCGTGGTTAAatgaagttattaaattagatataCATTGTCTTCATTGTACAATATGTTTAACTTCTATAACAAATTGGAATGATATGTTCCGTCATCTTGAAGAACAACATGAAATTGTTCTAGACGAAGCATATACTAAAGTTATACCTTTTATACTGAATAGTGAATTAAATTGCGCGTTGTGTAGTGAATCATTTTCGAGCTATCATTATTTAGATGGTCATATGAATTCACATTATAGTAATTACATTTGTTACGAATGCGGCGATATATTTTTAGCTGCAAGTCGTCTTAACAGACATATCGAAACTCACCAATTAGGTGAATATCCATGTCCTGCTTGcggtaaaatattcaaatcgaATAAATATATGAGAAAACATTAtgattatatacataatacagagaaaaagataaaatgttattattgtcCGGAAAGATTCTTTGGTACATATGAAAGACATCAACATAACCTTAAAATGCATAAGGAACGGGTTAAAATTATGACTTGTGAGGTTTGCGGGAAGACATTTGATTGGTTACCGTATTATACGAGTCATATGAGAAGAATACACGGGACAGAAAAGAATTATGAATGCAAAGATTgtggaaaaatgtttttaatgaaatatgaattaaataatcatagaattaaacataaaacagaAAAGAATTTTGTGTGTGATGTATGttctaaacaatttaaaagcaaacctGGGTTATTAAAGCATTATCAAATTTCTCATGGTTAA
- Protein Sequence
- METNAETFIFLARCKCCLNEGELQNLWEPYLFDGETEIYGEMLSECFSLSPQADEHLQSIEMICNSCIKRLRDALSFRREVIASIQVLKEHQDKMFLHTIAKEEEVETEKESEYQSIEYLDFTEGSKEQSSDDDNIINDESQNLNKKTTKDVTKWPKKLPKEFRNKTYKQYSVSALKMAIDAVLSERMTIAQASVTYGVPRKTVTAKIHAARNKKEDKDDEPNKFYEQEKHNKLVEEIKIILTYTNAVPYKSKASRYYCIYCSDSPGFEDGQDLRTHTRTKHIAERTSGIDQIMRPPWLNEVIKLDIHCLHCTICLTSITNWNDMFRHLEEQHEIVLDEAYTKVIPFILNSELNCALCSESFSSYHYLDGHMNSHYSNYICYECGDIFLAASRLNRHIETHQLGEYPCPACGKIFKSNKYMRKHYDYIHNTEKKIKCYYCPERFFGTYERHQHNLKMHKERVKIMTCEVCGKTFDWLPYYTSHMRRIHGTEKNYECKDCGKMFLMKYELNNHRIKHKTEKNFVCDVCSKQFKSKPGLLKHYQISHG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01144485;
- 90% Identity
- iTF_01149907;
- 80% Identity
- iTF_01149907;