Pxut002404.1
Basic Information
- Insect
- Papilio xuthus
- Gene Symbol
- Arid5b
- Assembly
- GCA_000836235.1
- Location
- NW:886704-936554[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-13 3.6e-10 39.8 0.1 2 89 305 376 304 376 0.90 2 2 3 4.7e+03 -2.3 0.0 3 18 457 472 456 484 0.73
Sequence Information
- Coding Sequence
- atggaGAAGCCGTCATATaagCTGGTGGGCGCACCTTGTGGTCAACATGGGCAGTATACATTCTACAAGGCGCTCCGTTTGTCAGGAAAGACGGAGAGGATAATTGCAATTGGAGACTTCTTCTTTGTCAGGATATGGCAGGATTCAGAGCTCGTGTCAATAGGGGAATTGCAACTGTTATGGACGGATCGTGTATCAGATCAGACACTCGTCAGTTTGAGGCTGTATTTTCTGCCTGAGAATACACCTGAAGGGAGATGTCAACATGGAGAGGACGAAGTTCTAGCTATAAATGATAAAGTGGTGGTACGCGCTGAAGATCTCCTCAGCTGGGTGTCGGAGGGTTCCGGTTGGCGGTGGGGTCTGCGCGCTGTGTGGCGCGGAGCCTGCGCCCCACCAGCTGATCCAAGCATCACAGCACCATTGCATCATACCAAACTTGACTTCAGTGATGTGGAGAGAGAAAAGAATGCTATAAGTATAGACGCGGATAGTCCCGGAGTAATGGTGTTCTCATATCCCCGGTATTGTCGTTACCGGGCATTACTTGCCCGACTTGATGGTATCCAGGCAGACTGGTTGCGGGATTCTCTAGTCGCAGCATTAGGTGGTTATGCAGCATCTACCAAGAATACTAGGATATTGTACTGCAAGGAAACATTCGAGTATCCGGAACTAGAAGGTCATGAATTTGTATGTAACCATCTCGCGCCCCGACTGAAGGGTAGACCGCGCGGTCGCCGGCGCCGAGCTCGCTCCCGCTCAGCCTCGCGCTCCGATAGCGACGATCCTGATGCTATCATGCCGAGGGAACACCCGCCGACACCACGTCGTCTGTCATTACGTAATGGTGGGTCTGAGCGGAGAAGTGATGAGGAGAGTGAAGGCCAGGGTGAAGGACAGAGTCAGGAAGACAAAGAGTTCCTGCAGGAGCTGAGCAAGTTCCATAAAGAGAGGAATGAAGACTTCAATTCTATGAAGCATTtATCACTGCGCGCGCTGTACAAGGGCGTGACAATGCGCGGCGGGTACGAGGCGGTGTGTCGTGCTCGACTCTGGCGGGCACTTAGTCCTGACCAGCCAGCGCGCGCACGCAGGCACTATGAAAGGTTCCTACTATCTTTTGAAAATCACGAAAGGAAAAACGGCTCTAAATTCCAAAAGATAAACGGTCATAACGATTCAAAAGATACTATTGAACTAAAAGACTCACCTCTAAGAGAACTAGATTCAATGAAAGATATACCACAAAAGAGATTGAGAACTCCATCTCCGAAAAAAGAGAGAGTTCTCCTAGATAATGAGACAGGAGAAGTTGTTAAAACGGAAGATTTGAATGTCACTTCGAAGCCTGCAGAAGAATTAAATAGAGAATTCCTAGATTCTCTCAAAGAATATTCGAAAGATGATAAATCTTGTATGAAAATCTCCGTAAAACCTGTGgagaaattaatagaaattaatgaGAAAAGAGATGGATTgtttattaatgaattaacGCAGAAATATAGTTTGGCAAGCGCTGACGCAGCATTGCTGCAGCAGCTGGCCGGTGACAGGAAAGTGATCAACGGACATCCCCCGAACCTCACAAATCAACCCCCAACATCATCCCCTCACATACAGTCACACAACGCAACACAACCAGATCAGAGGACTGGCAGACCCTTAGGGCGCAGTTCTCTGCGTGCTGTGAGAGTGAAGCCTGCGCGTCCTCCGACACATAACACCGcGTCTGTCCCGCCATTAGGAGCGGACTCGTCATCCCCACAACCTGCGGTCAATAACTTTGGCATCCATCATCCGCACACACCACCCGCTGCCACTGCCACCAATACCACCGCAGCCAGCCACAGCGATGATGAAATTGTAGAGGTACCCTACAAGCCAAAAACTCCAGAAATAATAGACCTGGATGAATACCCCGAGAGCCCGCAGGAgatcaagaagaagaaattaGACATACTGAAGGAGCGCGGCCTCGAGGTGACCGCCGTGCCCCCCCAGACCCCCAACAAACCTGCCGTAGAAATTGTCAGAGTACCAACATCGCCCCCCAAAGCACCGACACCACAAAATCTATCCAAAAATTACACTTTACTCGACGGCAAAGCTGTCGTCGGCTCAAATTTAGAAATCACTCTAGTCAATCCCAAATCCCCCCATCAGACCCCACCGAAAAGACCACCACAAAAACGGTCTTCTAACGGCAAATTCATGTCCGCGAAGACTCCAACACCACCCAAAGAGTATCCAAAACCTTACCAGTCACCAGCTAAGAAGAACCCAATCACAATACCCACGTACCACACCAGAGATGACACGTCTCCAAGTTCAACTGGTTCCAGAGACTCAAATCTGTCTATGAAGAGTCCCAGCTTAGCTCAAATGATGGAACTCCAGAAATCATCAATGCCACCAATGGCGGTGCCATTCATGGATCCAGTTTATATGAGTGCGTTGTACAGCAGCTTGGGACAGATGGATCAGAGGCAGCTGGCGGTCTACCGGGACCTGATGGCGAGTCAGTTCCGAGGATACACCGGTCTACTGAATATAGGAACTCCAACaacgaaaaattaa
- Protein Sequence
- MEKPSYKLVGAPCGQHGQYTFYKALRLSGKTERIIAIGDFFFVRIWQDSELVSIGELQLLWTDRVSDQTLVSLRLYFLPENTPEGRCQHGEDEVLAINDKVVVRAEDLLSWVSEGSGWRWGLRAVWRGACAPPADPSITAPLHHTKLDFSDVEREKNAISIDADSPGVMVFSYPRYCRYRALLARLDGIQADWLRDSLVAALGGYAASTKNTRILYCKETFEYPELEGHEFVCNHLAPRLKGRPRGRRRRARSRSASRSDSDDPDAIMPREHPPTPRRLSLRNGGSERRSDEESEGQGEGQSQEDKEFLQELSKFHKERNEDFNSMKHLSLRALYKGVTMRGGYEAVCRARLWRALSPDQPARARRHYERFLLSFENHERKNGSKFQKINGHNDSKDTIELKDSPLRELDSMKDIPQKRLRTPSPKKERVLLDNETGEVVKTEDLNVTSKPAEELNREFLDSLKEYSKDDKSCMKISVKPVEKLIEINEKRDGLFINELTQKYSLASADAALLQQLAGDRKVINGHPPNLTNQPPTSSPHIQSHNATQPDQRTGRPLGRSSLRAVRVKPARPPTHNTASVPPLGADSSSPQPAVNNFGIHHPHTPPAATATNTTAASHSDDEIVEVPYKPKTPEIIDLDEYPESPQEIKKKKLDILKERGLEVTAVPPQTPNKPAVEIVRVPTSPPKAPTPQNLSKNYTLLDGKAVVGSNLEITLVNPKSPHQTPPKRPPQKRSSNGKFMSAKTPTPPKEYPKPYQSPAKKNPITIPTYHTRDDTSPSSTGSRDSNLSMKSPSLAQMMELQKSSMPPMAVPFMDPVYMSALYSSLGQMDQRQLAVYRDLMASQFRGYTGLLNIGTPTTKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -