Pxut004027.1
Basic Information
- Insect
- Papilio xuthus
- Gene Symbol
- JARID2
- Assembly
- GCA_000836235.1
- Location
- NW:5237083-5252475[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-19 4.1e-16 58.8 0.0 7 89 838 917 833 917 0.91 2 2 7.5 1.2e+04 -3.5 0.1 59 85 1002 1026 993 1027 0.65
Sequence Information
- Coding Sequence
- aTGAAAAGaaGGAAAGTTCAAGCGCAACGAAAATTTGCACAAGGTGTATATATCCCACCAAATAcacaaaacacaaatattgaCAAAGTTACAAATCCTTCAACACCAAAGGACAATGATATTAGAAGCAATGTTTTTCACAGTAGCACCTCAGCCAAAAGTCTTCTTGACGTCATTAGTTTTCAAAATCTACATAAACATAGGGAACCGATCGTTTTATTGGAGCGATTAAGACATTACCCAGAACAACTCCAAGCATCATCATCTGACACATCCCAAGAATATAGTAtaagtaaaatcaaaaaagtGGCTACAgcaattaaacataatatgtgCCTTAGACCTAAGAAAAAATTTACCAAATTTGTTAAAAGGCTaagagagaaaaatattataaaaagtaaacggGAACCCAAGGTTAACAAAGATGCATCAAATTTAGAAGCGATAGATTCTTGCAATGAAGATGACAAACCTTTAATGTACCTTGCCAAAGaggagaaaaataataaaacagtgaACAAGACGTGTAGTAATACTAACAAAGaaAAAGAGAAGAAAGTAAGTTTTAACATTGGCCCCCATGAACATTTGTCATCTGATGATTATGAACCCCAACAAAAAAGTGGACAACAGTATGACCCACACGGTCACAACTCAGCAACACACAAAGatGGACTAACAAAGCAATCAATAGTTTACACTCGGTCACATGGCAGAACTACAGAGAGTCGTGAATATGAGCAGGAAGTACCCAAGGGACCTGGTCGGCGACATCGCAGTCGATCCATACTCAAAACAGATAGCGTGAAAAGACAGCGCTTGGGCACCCGCTCGAGTCGACGGTCGGTGGCATCAGCCAGCGAATCAGACAATGAAGAGCTGCAGGAAAATGACGAATCGGGATGTACTAGCTCACCAAAGAAGACAGTTATAGATGACACAAACAAGAATGGTTTACCAACTCAACGGCTTACTTCCCGTTCTCTGGATGATGCTTCTAAATCAAGACAGGAAGAACCATGTAATGGACAACCACATAGTAATAGCTTATTGCAAAATACAGACAAGATCAGGAATTCTGGTGAAAAGGAAACGCCTCAAAAAACAAGTAGCCAACCATCAACACCCAACAAAAAGTTAACCGCAATTACAGTGACTACCACAGCTGAAATAAACACCACAGCCAAGTCCTCAACATCTCTGCGGCTTCTTAAGAAAAGACCATCCAATACAACACTAGAATCCTTAATACAATCCGCATTGGAAGTTCAGCCTATTGTCAAAATTGAATCTCCAGGTCGTTTCAGTCTTCTAGaaaaaattatgattactaACTCTTCAAAATCATCACAAGTCAAGTCTATTGGTGAAGgacaaaaatcaaaatctgAAAATTCTGATGCAAATACCAAACCTACAACCAGTACTGATGACACAGTTTCAACTTCTGAAGatgatCACAATAATGAACCATCAACAGctgagaaatatttaaacgcACCATTAATTTCTAGAAGGTCACGTACCGTACATATACCTTTAGataaaatgtctaaaacaaATCAggacaaaagaaatattacaaagaagCAAATATCTAGCGCAATAGAGCAATCTGATTCTATTGATACaacttcaaaaattaaaaagcatcaAATAAATTGCCCATCTAAAAACTACCCAAGTATGAAAGATGTTGTCTATGCAGACCCTAAAGATTTGGTGAACCGATGTGAACAATGCGATTATTGTGCATTCGTCGACAAAGTACAGTGTGtatcaaatatgtttaaaatacaatactgtcgaaagattataaaattaaaaatatacggaTTTGATGCCGAAGACGAGGAAACAGAAAAAAGTGAATCCAATATATCAAGAACGAAGAAGCGTCAGGGTAACGAGCCGAATACTGATTGTGATAAACAAacgtgttatttaatttatgataaagaTTCAGATCATGTTGTGGAAGTAAAAAGAACTCTGTGTGCTAATCAGGTGGCACATATTGAAAGTGCGAATATTGTCCCCAAGACATCGAACACAAAAATCATGACAGTTACTGCACTTGATCGTGACTATCTTCTAGATGATATCATAAATTTTGTCTTATCAGAGAAACCCAAAACCAAAGTGGAAACTCCCTCACATTCTGTTAATGGTGCTAAGTCTGTATCAGCCCAAAAGCCTACAAATGCTTATAAAGTAAACGGAGATCATAATGGTACTGAGCAAAAGAGTTCAGCTATACCAAAGCCTGTGCCTAATGCGAGACGAACTGATGCACCAATCTTCTTTCCTAACGAACAAGAATTTAagGACCCCATTGCTTATTTCACTAAAATTATGCCTTTCGCTGCGAAATATGGCTTATGTAAAGTTGTGGCTCCGAAGAATTTTAAACCAAAGTGTATGTTAGATGATGAAGTGCGCTTTGAAGTGACGAACCAATACATATCTCGTCTTTATAAGAGATGGGGACCAGCCTCAAGAGAATTATGTGCTATTAAAGCTTATTTAGCTTCCCAAAGTGTGATCTTCAGTCGGCCGCCTTTGCTCGAAGGAGTTGAGGTCAACTTACCGaagttatattatttggtACAAACTCTGGGCGGCCTAAAAGAGGTCATCGAAAAGAAGCGCTGGACTAAAGTAGCTGAAGAAATGAATCTTTCCAAAACGCCAAAAATCGAAGTTAAATTGGatcaaatatatgttaaatacatattgCCTTATGACACGATGTCAGATGATGAGCGGACAGATCTTATGAAAGCAGTTGATAATCACTGGAGCaagaaacacaaaaaaatgctACAACGTGCTATGAAGCCATTACATAGACAGAAACGACTCCTAGACGAATCTGAATCTTCCGAAGAAGACATTGATGAAGATGTATATGTATCGGGAGCACTGGCCGAAGCAGAGGACTGTATCAGCAATGGCAGGCAAATGAATCTGCTCACTTTTAAAAAGGTGGCAAGTAAATGTAAGGAAATGTACATTCCAAATAGTAACCAAAATACTCAGATTGAAATAGAACAAACATATTGGAAAATGGTTCTTCTTGCCCAAGACCACATTTGTGTTAATAACGCATCAATCGACACCGGCGAGGAAGGATATGGTTTCACTAAAGATCAACGAGACTCTTATGGGAAACATCCATGGAATCTAAAGGTACTTAGTCAGAATAGTGGGAATGTTCTAAGATTTTTGGGACCAGTACTGGGAGTGACAGTTCCCACATTGCATCTTGGGATGGTCTTCTCAACCAGCTGTTGGCACAGAGATCCCCACGGACTTCCCTGGATTGAATACATGCATACTGGACCTGGCAAAATTTGGTATGGCATTCCCGATGAACAAAGTGACAATTTCCGGAGAGCCGTAGAACAGCTATGCCCAACATCATGTCAAAACAAATCGATTTGGCTTCCGTCCGATATTACAATGATCCCACCAGACCTGCTCTTGCTAAATAATGTATCAATATCTAGAGCAGTTCAAGAGCCGGGtcaatttattttggtttttcCAAAGGCATACTCATGTTCTATTGCAACTGGATACACTGTATCTGAGAGTGTATATTTTGCTACTAATTCATGGTTGGAAACAATTGATCAAGTGTTTCAAgaAGTGCGTCAGAGCTGTGAACCTACAATGTTCTCGCTGGAACATCTGCTGGTGTCTGCTGCGCGTGACTTGCGAGCGCCAACTGAGGTTCTCAAACTGGTCCATGTTCTCCTCGGGAAAATCATACGAGAAGAATTGAAAAACCGCAATGCCCTCGCCGCATATAAAATTCTGAACTACAACCCACAACAAAATAGGCTTACTCGGAAGCGACCCGCAGGCGCATGGAATGTTCGAGATCAAGACGAGTGTGAGATCTGTCAAGCGACCTTGTACCTCTCAAAAGTGAGAGGATTGACAGACAAGAAGCGGTCAGTGTGCCTTCAGCACGCCCTGCAGTTGCTTGACACTGAAAAGAACAAGGAATGTGACTTGACCGGTGTTGAGCTTGAATTATTCTTTTCTGATGCAGAATTAGAAAGGATTATGACAAAAATCAAAGCTCGTATCTAA
- Protein Sequence
- MKRRKVQAQRKFAQGVYIPPNTQNTNIDKVTNPSTPKDNDIRSNVFHSSTSAKSLLDVISFQNLHKHREPIVLLERLRHYPEQLQASSSDTSQEYSISKIKKVATAIKHNMCLRPKKKFTKFVKRLREKNIIKSKREPKVNKDASNLEAIDSCNEDDKPLMYLAKEEKNNKTVNKTCSNTNKEKEKKVSFNIGPHEHLSSDDYEPQQKSGQQYDPHGHNSATHKDGLTKQSIVYTRSHGRTTESREYEQEVPKGPGRRHRSRSILKTDSVKRQRLGTRSSRRSVASASESDNEELQENDESGCTSSPKKTVIDDTNKNGLPTQRLTSRSLDDASKSRQEEPCNGQPHSNSLLQNTDKIRNSGEKETPQKTSSQPSTPNKKLTAITVTTTAEINTTAKSSTSLRLLKKRPSNTTLESLIQSALEVQPIVKIESPGRFSLLEKIMITNSSKSSQVKSIGEGQKSKSENSDANTKPTTSTDDTVSTSEDDHNNEPSTAEKYLNAPLISRRSRTVHIPLDKMSKTNQDKRNITKKQISSAIEQSDSIDTTSKIKKHQINCPSKNYPSMKDVVYADPKDLVNRCEQCDYCAFVDKVQCVSNMFKIQYCRKIIKLKIYGFDAEDEETEKSESNISRTKKRQGNEPNTDCDKQTCYLIYDKDSDHVVEVKRTLCANQVAHIESANIVPKTSNTKIMTVTALDRDYLLDDIINFVLSEKPKTKVETPSHSVNGAKSVSAQKPTNAYKVNGDHNGTEQKSSAIPKPVPNARRTDAPIFFPNEQEFKDPIAYFTKIMPFAAKYGLCKVVAPKNFKPKCMLDDEVRFEVTNQYISRLYKRWGPASRELCAIKAYLASQSVIFSRPPLLEGVEVNLPKLYYLVQTLGGLKEVIEKKRWTKVAEEMNLSKTPKIEVKLDQIYVKYILPYDTMSDDERTDLMKAVDNHWSKKHKKMLQRAMKPLHRQKRLLDESESSEEDIDEDVYVSGALAEAEDCISNGRQMNLLTFKKVASKCKEMYIPNSNQNTQIEIEQTYWKMVLLAQDHICVNNASIDTGEEGYGFTKDQRDSYGKHPWNLKVLSQNSGNVLRFLGPVLGVTVPTLHLGMVFSTSCWHRDPHGLPWIEYMHTGPGKIWYGIPDEQSDNFRRAVEQLCPTSCQNKSIWLPSDITMIPPDLLLLNNVSISRAVQEPGQFILVFPKAYSCSIATGYTVSESVYFATNSWLETIDQVFQEVRQSCEPTMFSLEHLLVSAARDLRAPTEVLKLVHVLLGKIIREELKNRNALAAYKILNYNPQQNRLTRKRPAGAWNVRDQDECEICQATLYLSKVRGLTDKKRSVCLQHALQLLDTEKNKECDLTGVELELFFSDAELERIMTKIKARI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -