Basic Information

Insect: Papilio protenor
Gene Symbol: -
Assembly: GCA_029286645.1
Location: JAGSMZ010000033.1:2003002-2008891[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0043 0.37 11.8 5.9 1 23 181 203 181 203 0.98

2 11 5.3e-05 0.0046 17.8 0.8 1 23 209 231 209 231 0.98

3 11 4.5e-06 0.00039 21.2 0.7 1 23 237 260 237 260 0.97

4 11 0.026 2.3 9.3 3.3 1 21 266 286 266 288 0.95

5 11 9.3e-05 0.0081 17.1 2.7 1 23 294 316 294 316 0.99

6 11 6.2e-06 0.00054 20.8 1.4 1 23 322 344 322 344 0.98

7 11 0.00063 0.055 14.5 1.0 1 23 352 375 352 375 0.97

8 11 0.0032 0.28 12.2 3.4 2 23 382 403 381 403 0.97

9 11 0.052 4.6 8.4 1.1 1 23 409 431 409 431 0.98

10 11 8e-06 0.00069 20.4 2.2 1 23 437 460 437 460 0.96

11 11 1.2e-05 0.0011 19.8 4.7 1 23 474 496 474 496 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0043	0.37	11.8	5.9	1	23	181	203	181	203	0.98
2	11	5.3e-05	0.0046	17.8	0.8	1	23	209	231	209	231	0.98
3	11	4.5e-06	0.00039	21.2	0.7	1	23	237	260	237	260	0.97
4	11	0.026	2.3	9.3	3.3	1	21	266	286	266	288	0.95
5	11	9.3e-05	0.0081	17.1	2.7	1	23	294	316	294	316	0.99
6	11	6.2e-06	0.00054	20.8	1.4	1	23	322	344	322	344	0.98
7	11	0.00063	0.055	14.5	1.0	1	23	352	375	352	375	0.97
8	11	0.0032	0.28	12.2	3.4	2	23	382	403	381	403	0.97
9	11	0.052	4.6	8.4	1.1	1	23	409	431	409	431	0.98
10	11	8e-06	0.00069	20.4	2.2	1	23	437	460	437	460	0.96
11	11	1.2e-05	0.0011	19.8	4.7	1	23	474	496	474	496	0.97

Sequence Information

Coding Sequence: ATGTCTTTACCGGAGGCATCCGAGAGAAAGACTCTGCTGCAGTCTTTTATAAACAGCTTTAACCAACAAGAAGTAGAAGTTACTACTATGCCAGGTACTAGTAACACAGTTGAGGAAGTGGCTGATACAGGGGTGGCATACTTTGTGGATGAAGAAGGACGCTACTACTATCAGCCTGCTGATGATGACCAGAACATAGTATCTTTACCGATGATTACTGATGACACTGCAGAGGTCATACAAGAGGACGACGATGACGATGTAGTGGTGGAAGCACAAACTGCAATCATGACAGACTATAATGAGTTCCAGACAGTAACACTGATGCCCTCGGAAGATGGCTCGGGTGGATTGAGCTACGTGCTTGTTGTTCAGGAAGACCAAAAGCAAGTTGTTAACATCGACGTTGAGaatacaAAGAATTCTGAGGATGTGTATAACTTTGAAGAAGAAGATGAAGAGGGTGGTCAAGAGGGCAGCGATGATGgcaataacaaaagtaatggAACAAGCAAGCACTCACCATACATACGCCCACGGTTCACCTGCAATTTTTGCTCATACACCAGCCATAGACGATACTTGCTGCTGAGACATATGAAATCTCACTCGGAGGACCGGCCACACAAGTGTGAAGTTTGTGAGCGAGGCTTTAAAACCATTGCCTCGCTTCAGAATCACGTGAATATGCACAATGGTGTTAAACCATATGTTTGCAAGTACTGCAATAGTCCTTTTACTACCTCAGggGAGTTGGTACGCCATATCAGGTACAAGCACACACATGAAAAACCCCACAAATGTACTGAATGTGACTATGCTTCGGTGGAATTGTCGAAATTGCGGCGGCACGTCCGATGCCACACTGGGGAACGTCCATATCAGTGTCCACACTGCACATATGCTTCTCCGGATACCTTCAAATTGAAACGCCACCTGCGAACTCACACCGGAGAAAAACCATACAAATGTGATTATTGCAGTTTGTCCTTCACCCAATCAAACTCATTGAAAGCACACAAACTTATACACAATGTGTCTGAGAAGCCAGTGTATGCATGCGAGCTGTGCCCAACGAAATGCGGCCGCAAAACTGATCTTCGTATCCACATTCAAAAACTACACACTTCAGATAAGCCTCTGAAATGCAAGATATGTGCAAAAAGCTTTCCCGATCGCTATTCCTGCAAAGTGCATTATAAGacGCACGAGGGAGAGAAATGTTTCAAGTGTGAAATATGCATGTATGCCTCGACAACGATACGACGACTGAAGTCTCACATGCTGAAACACACCAATGAGAAACCATTCGTCTGTGAACAGTGCGATCAAAAATTCAGgcAAAAACAGCTACTGCGACGACATCAAAACTTATATCATAACCCAAATTATGTGCCGAAACCTCCAAAGGAGAAGACACATACTTGCCATGAGTGTCGCCGCACGTTCGCTCACAAGGGGAACCTGATCAGACACCTCGCAGTCCATGACCCGGAGTCTGGCCATCATGAGAGAGTCCTGGCACTCAAACTCGGCCGTCAGAAGAAAGCTAAACGAGTCGATGGACGTCTTAAGGAAATATGTGAAGAGGACTCGGATAGTGAGGAAAATGAGCAGAACACTGAAATTCTAAACGCCAGTGCTAAGATACAGAGTGAGTATGTAACGGTCACTGATGGTGACAATCAGCAGTACGTGGTGTTAGAAGTTATACACCTCGAGGATGGCACCGAGCAGCAAGTCACCGTTATGGCCCCTGAATACATTGAAGAGGATGAACAAGttgaggaggaggaggaggaggaggaggatgATGATTCAGAAGACACAAAGAAAAATCAAATAGTGCTGTTGCATGAACAAGAAaaacaaagaacatttaaGTTGGAGAATGATGTTGACACATGTTTTGGATTTGATGAGGAAGATGTCGACGACGATGACGATGATGAAGACAAGGCTCTTATAGAAGTAGTTTAG
Protein Sequence: MSLPEASERKTLLQSFINSFNQQEVEVTTMPGTSNTVEEVADTGVAYFVDEEGRYYYQPADDDQNIVSLPMITDDTAEVIQEDDDDDVVVEAQTAIMTDYNEFQTVTLMPSEDGSGGLSYVLVVQEDQKQVVNIDVENTKNSEDVYNFEEEDEEGGQEGSDDGNNKSNGTSKHSPYIRPRFTCNFCSYTSHRRYLLLRHMKSHSEDRPHKCEVCERGFKTIASLQNHVNMHNGVKPYVCKYCNSPFTTSGELVRHIRYKHTHEKPHKCTECDYASVELSKLRRHVRCHTGERPYQCPHCTYASPDTFKLKRHLRTHTGEKPYKCDYCSLSFTQSNSLKAHKLIHNVSEKPVYACELCPTKCGRKTDLRIHIQKLHTSDKPLKCKICAKSFPDRYSCKVHYKTHEGEKCFKCEICMYASTTIRRLKSHMLKHTNEKPFVCEQCDQKFRQKQLLRRHQNLYHNPNYVPKPPKEKTHTCHECRRTFAHKGNLIRHLAVHDPESGHHERVLALKLGRQKKAKRVDGRLKEICEEDSDSEENEQNTEILNASAKIQSEYVTVTDGDNQQYVVLEVIHLEDGTEQQVTVMAPEYIEEDEQVEEEEEEEEDDDSEDTKKNQIVLLHEQEKQRTFKLENDVDTCFGFDEEDVDDDDDDEDKALIEVV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01143303; iTF_01141868; iTF_01147562; iTF_01145435; iTF_01142572; iTF_01141104; iTF_01140380; iTF_01144742; iTF_01139133; iTF_01149800;
90% Identity: -
80% Identity: -