Basic Information

Gene Symbol
Xbp1
Assembly
GCA_029286645.1
Location
JAGSMZ010000022.1:1620107-1621921[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.1e-18 2.2e-15 56.9 9.2 2 65 46 109 46 109 0.96
2 2 0.00063 0.65 10.5 1.0 33 55 91 113 91 117 0.91

Sequence Information

Coding Sequence
ATGAGCGCCCCAATTATCATCACCGTTCCCAACAACTACCTAGCGATGGAGGACATGGATTCCCAGGTGATGGTGGACGTTGcttcaccatcaccatcaccatcgcGAAAGAGAAGGCTGGACCATCTCACGTGGGAGGAGAAAATGCAGCGGAAGAAACTAAAGAATCGTGTCGCAGCACAGACTTCACGCGACAGGAAAAAAGCTAAAATGGATGAAATGGAAAGccgtattaaacattttatggaTGTAAATGAAAAACTTATTAGTGAAGTGGAGAGTTTGAagGCACTGAACGAGCGTCTGTTAAGTGAGAACACGAAGCTACGCAGTGAGGCGGCGGCTCGCACCGTCGCGGGAGCCCCGGGACCAGCAGCGTCTCAGCCTCAGCAGAAGGTGGGGCTCCCGTCGGCGATGCGGGTGGCGCGCCTGCTGCTGGCGATGTGCCTCTTGCAGACATCCTCGCACAGTTCGAGTCCGAAGAGTACCTCGATACCCTTCAGCAACTTGCAAACTCCCTCCTCCAAGAAATTGATACAAACACTGCAGGAGCGAATCAAGATGTACCAATCAGGGAATCTGGAGAATGCATTACAGGACCTCAAGTGGTGGGGACCTCAGCAAAGCAATTGGAATCCAGTGAAGGTGGAAGCGTAA
Protein Sequence
MSAPIIITVPNNYLAMEDMDSQVMVDVASPSPSPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMESRIKHFMDVNEKLISEVESLKALNERLLSENTKLRSEAAARTVAGAPGPAASQPQQKVGLPSAMRVARLLLAMCLLQTSSHSSSPKSTSIPFSNLQTPSSKKLIQTLQERIKMYQSGNLENALQDLKWWGPQQSNWNPVKVEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01491609;
90% Identity
iTF_01142156;
80% Identity
-