Basic Information

Insect: Papilio polyxenes
Gene Symbol: stc
Assembly: GCA_026167825.1
Location: JAOPJD010000002.1:7274602-7284027[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 6 2.5e+04 -4.3 1.6 15 19 473 477 472 477 0.81

2 16 0.42 1.8e+03 -0.4 0.7 4 10 507 513 506 513 0.92

3 16 0.00011 0.46 11.0 18.1 4 19 521 536 519 536 0.93

4 16 1e-07 0.00042 20.8 13.9 1 19 572 590 572 590 0.98

5 16 0.00023 0.97 10.0 9.9 1 19 631 649 631 649 0.98

6 16 6.8e-07 0.0029 18.1 13.8 1 19 690 712 690 712 0.88

7 16 6 2.5e+04 -5.3 2.2 6 10 742 746 742 746 0.94

8 16 0.044 1.9e+02 2.7 7.3 1 11 752 762 752 763 0.93

9 16 0.13 5.3e+02 1.3 0.3 4 10 767 773 766 774 0.93

10 16 1.1e-05 0.046 14.2 14.0 3 19 781 797 779 797 0.92

11 16 6 2.5e+04 -4.4 1.5 6 10 826 830 826 830 0.84

12 16 3.4 1.4e+04 -3.3 1.3 7 11 833 837 833 838 0.84

13 16 0.0014 6.1 7.5 9.4 10 18 844 852 841 853 0.92

14 16 1.3e-07 0.00054 20.4 12.3 1 16 889 904 889 912 0.90

15 16 0.035 1.5e+02 3.0 10.9 1 18 919 941 919 942 0.80

16 16 1.4 5.8e+03 -2.1 0.2 8 12 958 962 957 962 0.81

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	6	2.5e+04	-4.3	1.6	15	19	473	477	472	477	0.81
2	16	0.42	1.8e+03	-0.4	0.7	4	10	507	513	506	513	0.92
3	16	0.00011	0.46	11.0	18.1	4	19	521	536	519	536	0.93
4	16	1e-07	0.00042	20.8	13.9	1	19	572	590	572	590	0.98
5	16	0.00023	0.97	10.0	9.9	1	19	631	649	631	649	0.98
6	16	6.8e-07	0.0029	18.1	13.8	1	19	690	712	690	712	0.88
7	16	6	2.5e+04	-5.3	2.2	6	10	742	746	742	746	0.94
8	16	0.044	1.9e+02	2.7	7.3	1	11	752	762	752	763	0.93
9	16	0.13	5.3e+02	1.3	0.3	4	10	767	773	766	774	0.93
10	16	1.1e-05	0.046	14.2	14.0	3	19	781	797	779	797	0.92
11	16	6	2.5e+04	-4.4	1.5	6	10	826	830	826	830	0.84
12	16	3.4	1.4e+04	-3.3	1.3	7	11	833	837	833	838	0.84
13	16	0.0014	6.1	7.5	9.4	10	18	844	852	841	853	0.92
14	16	1.3e-07	0.00054	20.4	12.3	1	16	889	904	889	912	0.90
15	16	0.035	1.5e+02	3.0	10.9	1	18	919	941	919	942	0.80
16	16	1.4	5.8e+03	-2.1	0.2	8	12	958	962	957	962	0.81

Sequence Information

Coding Sequence: ATGTCCCAGTGGAATAATTCTTACGACTATAACAACCAATTCCAAGCGCCGCCTAATTCGTGGAATAGAGATGTAAATGGGCAATATGTAAATCAACCTTACTATGACAACAGACAATATGAGTCAAGCAACCAATATGTAAGTTTTGATGAATTTTTAACACAAATGCAGGGTAATGGTGTTCCACAAAATAATGCTTCTAATTACAATAATGTACAGTACCGAGCATATCCAACTAATCAATACAACTATCAGAATGTACCATCACAAAATCCACAGATGGAATACAGTTATGGACACCACAACCCTAACACGAGTAATACTCTGGATACCTATTCAGTCAATGTTCAAAATCAATACAACCCATCTGTACCCGAGTTAAATACTTATTCAAATGAAGTTGTAATGAATTCAAAGTTGACACCAACTGCAACAGAATTTGTGCCAAAGTGTTCCATAAATGTGGCTTCTACTTCTCAAAATACTTCTCAAGAAACTTCAGTTACAAATGATGTACCAGCTAACAGAAGTGGTAATACTAAATCATCAGAAACCAATTGGAGAGAAAGACCGAGTAAGAACGAAACACTTAACTCTCAAGTGGAAACAAACAATTTTAACCGATATCAAAAAAATTATAAAAACACAGAAGGAAATCGTAATCGTGAGTCTAATAGTCGATATGAAAATAAACGTAATAATGAAACAAACCAAGAATCAACTGGGCGCTACCGTAATGGACATAGTAGTAACAGTAATCAATCAAATCCACAAAATAAAGAATCATCAAACCAAAATAAAGAACCAGAAAACTCTGCTAATGAGTCCTCTAACCATCAAAACGAAAATCATCGAAATTACGAAACGGGAAACAGAAATGAAACCAGAAAATATGCAAATGAAAATAATCAATCTAAATCAAATTCTAAAGCAAAAAATAAAGATTCAGATGCAGGTCGAACCTTCTATAATAGTTCTATTAATAAAAATAGTCAAGATGTTAGGAATGGTAGAGGGGAAGGTTCTGGAAGAAATCGAAACTGGATTGGTAGTCAACGTCTCAGGACGACAGAACGTAATATTGTTGAAGATGAACAATATGCTAATACTTATATGCATTACAAAGATGACAGAGCGGAACGAATAGCAAATAATAATAAGCATGAAAAAAACGCTAGCCCAGTTAAAGGAAGAAGTAAACCTACTAATGACTCGGGAGTTTCAGGCAACACAGCGATGACCCAACGTGAACGTCTCACTGAACAATTAGACAAGGGTACTTTAGAATGTCTGGTGTGCTGTGAAAGAGTCAAACAGACAGATTCGGTTTGGTGGTGTTCAAATTGTTACCATGTTTTACATCTTAGGTGTATAAGAAAATGGGCCATGAGCAGTTTAGTTGAAGGCAAATGGAGATGCCCGGCATGTCAAAACACGAATGAAGACATCCCAACAGAGTATCGTTGCATGTGCGGTGCTGTTAAATCACCAGAGTACTCACGTGGCTCGGTCAATGCTCACACTTGTGGCAAGTCATGCCGTCGACCGAGGAATTGCCCTCATCCCTGCACTTTGCTCTGCCATCCCGGCCCCTGTCCACCTTGCCAGGCCACTGTCAGCAAACAATGTGGCTGCGGTGCGGAGACTCGTTCTGTGCTATGCAGCAGCAAGCTGGCACAGCTGTGCGGGCGCGAGTGCCGACGCAAGCTGACCTGCGGCGTACACGAGTGCCAACGCGAGTGTCACGAGGGTCCGTGCGATGAATGCTCCGAAATTGTCACACAAGtgtgcTACTGCCCCGCGGCTAAGACGCGATCAGTACCGTGCACGTCGGACACGAGTGGCGAGCACGCGTGGTCGTGCGGCGCGGCGTGCGCACGCGTGCTGTCCTGCGGCGCGCACGTGTGTCGGCGTGTCTGTCACGCCCCGCCCTGCGCGCTCTGCCCCCTGCGCCCCGACAACGTGAACTCCTGCCCCTGTGGCAACACTAAGATAGAAAAGGATCAACGAAAGTCTTGTACGGATCCGATACCTTTATGCGGTAACATCTGTGCCAAGCCGTTGCCCTGCGGTCCGGAGGGAGATAAACACTTTTGTAAACAATTGTGTCATGAAGGTCCATGTCCAACATGTCCTGACAAGACTCTGTTACCGTGCCGTTGTGGTCACTCGAGCCGGGAGGTGCCATGCTCAGACTTGCCCGACATGCTCAACAATGTCTTCTGCCAGAAGAAATGTAACAAGAAGTTGTCTTGCGGTCGCCACCGTTGTCGTACTGCGTGCTGCGCTGCGCAGTCGCACCGTTGCGCAGTGGTGTGCGGGCGCACTCTCTCCTGTCAGCTCCACCGCTGTGAGGAGTTCTGTCACACCGGACACTGCGCACCCTGCCCTCGCGTCAGTTTCGAAGAACTCCATTGCGAGTGTGGCATGGAAGTGTTATTGCCACCAATCCGGTGCGGCACTCGTCCACCTGTGTGCCAAGCTCCTTGCCGACGCGAGCGACCTTGCCACCATCCACCTCATCACTCTTGTCACACCGGAGACTGCCCACCATGCGTCGTGCTCACCACCAAGATGTGCCACGGACGCCATGAGGAGCGGAAGACAATACCGTGCAGCCAGGAGGAGTTCTCGTGCGGTCTACCTTGCGGTAAACCTTTACCATGCGGCAAGCACACCTGCACCAAGACCTGTCACAAGGGACAATGTGATACTGACAAATGTAAACAGGCGTGTACGGAGAAGCGCGCGAGCTGCGGACACCCGTGCGCTGCTCCCTGCCACGTGGACAATGGCGGAGTCTGCCCCAGCGCCGCGCCCTGCCGACGTCTCGTGCGCGCCACATGCGCCTGCGCACGTCGCACCGCTGACAGACCATGTCACGAGAACGCAAGAGACTATGCCAAAATGATGAGTGCGCTGGCGGCTACAAAAATGCAAGAGGGAGGCTCCGTGGATCTTTCGGAAGTGCATCGCCCCGGGGCTATGCTGAAGACCTTGGAGTGCGACGACGAGTGCCGTATGGAGGCGCGCAGCCGGCAGCTGGCGCTGGCTCTGCAGATCCGTAACCCTGACGTGTCCGCCAAGTTGGCGCCGCGATACAGCGAACATGTTCGCTCCACCGCCGTACGCGAACCCGCCTTCGCACAAAACGTTCACGACTCCCTCACAGAGCTCGTGCAGCGCGCTAAGAAGTCTAAACAGAAGACGCGTGCACATTCATTCCCTTCAATGAATCGTCAGAAACGTCAGTTTATCCACGAGCTGTGCGAGCATTTCGGTTGTGAGAGCGTCGCCTACGACGCGGAGCCAAATCGTAACGTCGTCGCCACCGCTGACAGGGAGAAGTCGTGGTTGCCAGCGATGAGTGTGCTGGAGGTGCTGGCTCGCGAGGCTGGCAAGCGGCGTGTGCCGGGGCCTGTGCTGCGCGCGCCCGCAGCACCACCGCCCACACCAGCTCTCGCCACGCCCACAACATCCACCAGCAGAACCACTGGAGGTTGGGCTACATTGACATCTACAAATGCGTGGGCAGCTCGCAGTCAGCCTGCGCGCGTCGAGCCCAAGATTGACTACTTCGATAACCCGCCTGAAAACTAA
Protein Sequence: MSQWNNSYDYNNQFQAPPNSWNRDVNGQYVNQPYYDNRQYESSNQYVSFDEFLTQMQGNGVPQNNASNYNNVQYRAYPTNQYNYQNVPSQNPQMEYSYGHHNPNTSNTLDTYSVNVQNQYNPSVPELNTYSNEVVMNSKLTPTATEFVPKCSINVASTSQNTSQETSVTNDVPANRSGNTKSSETNWRERPSKNETLNSQVETNNFNRYQKNYKNTEGNRNRESNSRYENKRNNETNQESTGRYRNGHSSNSNQSNPQNKESSNQNKEPENSANESSNHQNENHRNYETGNRNETRKYANENNQSKSNSKAKNKDSDAGRTFYNSSINKNSQDVRNGRGEGSGRNRNWIGSQRLRTTERNIVEDEQYANTYMHYKDDRAERIANNNKHEKNASPVKGRSKPTNDSGVSGNTAMTQRERLTEQLDKGTLECLVCCERVKQTDSVWWCSNCYHVLHLRCIRKWAMSSLVEGKWRCPACQNTNEDIPTEYRCMCGAVKSPEYSRGSVNAHTCGKSCRRPRNCPHPCTLLCHPGPCPPCQATVSKQCGCGAETRSVLCSSKLAQLCGRECRRKLTCGVHECQRECHEGPCDECSEIVTQVCYCPAAKTRSVPCTSDTSGEHAWSCGAACARVLSCGAHVCRRVCHAPPCALCPLRPDNVNSCPCGNTKIEKDQRKSCTDPIPLCGNICAKPLPCGPEGDKHFCKQLCHEGPCPTCPDKTLLPCRCGHSSREVPCSDLPDMLNNVFCQKKCNKKLSCGRHRCRTACCAAQSHRCAVVCGRTLSCQLHRCEEFCHTGHCAPCPRVSFEELHCECGMEVLLPPIRCGTRPPVCQAPCRRERPCHHPPHHSCHTGDCPPCVVLTTKMCHGRHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCTKTCHKGQCDTDKCKQACTEKRASCGHPCAAPCHVDNGGVCPSAAPCRRLVRATCACARRTADRPCHENARDYAKMMSALAATKMQEGGSVDLSEVHRPGAMLKTLECDDECRMEARSRQLALALQIRNPDVSAKLAPRYSEHVRSTAVREPAFAQNVHDSLTELVQRAKKSKQKTRAHSFPSMNRQKRQFIHELCEHFGCESVAYDAEPNRNVVATADREKSWLPAMSVLEVLAREAGKRRVPGPVLRAPAAPPPTPALATPTTSTSRTTGGWATLTSTNAWAARSQPARVEPKIDYFDNPPEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01142814;
90% Identity: iTF_01144986;
80% Identity: -