Ppol005447.1
Basic Information
- Insect
- Papilio polyxenes
- Gene Symbol
- GATA-B
- Assembly
- GCA_026167825.1
- Location
- JAOPJD010000023.1:71773-74168[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-18 8.1e-15 54.6 3.9 1 34 11 43 11 45 0.97 2 2 1.8e-19 3.9e-16 58.8 4.9 1 34 64 96 64 98 0.98
Sequence Information
- Coding Sequence
- ATGGCGGAGTTTTTCACGATCGGGCGCGAGTGCGTCAACTGCGGTGCCATTCACACGCCGCTGTGGCGGCGCGACGGCACCGGCCACTACCTCTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGTCCGCTGAAGCAGCCCCGGCGGCTGATGGGCAGCAAGCGGCCCGGACTGACGTGTAGCAACTGCGGCACCTCCACCACGTCACTGTGGCGGCGCAACGTGCACGGCGAGACCGTGTGCAACGCGTGCGGCCTCTACTACAAGCTGCACGGCATCAATCGCCCGCTCGCCATGAAGAAGGACTCCATACAGGCTATGGTACCGCGGGTACTCACGGTAGTGGAGAACGGTCCGGGCGTAATCAGCGTGGGCAACGCGGAGAGCCGCGCGGCGCTAGCACTCGGCTACTACGTGCAGCACGCCATCAAACTGGACGAGCCGCCGCCCGCGCACGCCCACTCCGCACACGCCGCCCACGTCGCGCACGCCGCCCACGCCGCGCACATGTACGAGGAGGAGTACCGGCGAGCCGAGAGCGGCGAGCGCAGCGCCGCCGTATCGCTGGCCAGCTGA
- Protein Sequence
- MAEFFTIGRECVNCGAIHTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQPRRLMGSKRPGLTCSNCGTSTTSLWRRNVHGETVCNACGLYYKLHGINRPLAMKKDSIQAMVPRVLTVVENGPGVISVGNAESRAALALGYYVQHAIKLDEPPPAHAHSAHAAHVAHAAHAAHMYEEEYRRAESGERSAAVSLAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -