Ppol016049.1
Basic Information
- Insect
- Papilio polyxenes
- Gene Symbol
- SMARCC2
- Assembly
- GCA_026167825.1
- Location
- JAOPJD010000010.1:2074044-2089316[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.3e-12 2.9e-09 37.4 0.1 3 44 502 546 500 548 0.92
Sequence Information
- Coding Sequence
- ATGAAAGTGTTTATGGACATGAAGCCGGGCGGTTCGCTGTGCACGGTCCTAGCCACCATGTTCCGCTTCAAGTCGGAGCAGCGGTGGCGCAAGTTCGACTTCCAGGTCGGTAAGAACCCGTCCCGTAAGGATCTGAATGTGCAGATGATGATGGAAATCGAAAGCGCCCTGATGAGTGCGGAAGTGATACGATCACCTTGCGTGTACATACGTCCAGATGTAGATAAAGCTACTGCTAATAAAGTAAAGGATATTGTTAGTAATCATCAAGGAGAGATTTGTGAGGACGAAGAAGACGCGACTCATATAATTTACCCGACCGTAGACCCCCTGGAGGAGGAGTACGCTCGGCCGGTGTTCAGACGTGGTAATGGTGCGCTGGTGCACTGGTACTACTTGCCTGACAGTCACGATATATGGACACAGACGGAGCTGCCGGTGGATGTACCGGAGAATGTGAGCTGGGAGTGCACTCGCAGCGAGCCCTGGCGTGTGTCCGCGAGCTGGGCGCTGGACCTGCCGCAGTACAACGAGTGGATGAACGAGGAGGACTACGAAGTTGATGCCAACGGCAAGAAgaagGTTCACAAACTGAGGCTATCAGTAGATGATTTGATACCTGGCGCGGAGCCGTCCAGCAAAGGGAAGAAGAGCAAGAGGAAGCGATCTCCCTCACCTCCCCCGCAGAAACATGGCAAGAGGAAGAGCCGCATCTCCAAACGTCGTGATAATGAAGGCGAAGATGAAGATGATACTGCCTCACGTGATAACACTGATACTGCGCCTACGCCGGAGGCCGAGCGCTCCGCTGACACTCCAGCCGCGCCGCCACCGGAGCCCCCGGCCGCGACCGAAGCCCCCGCCACACCAGCACCCGCCATGGACGTGCACGACGACTCACAGGGCAAGCACAGCGACTCCAACACACAGGAGATGCTGAGTAAAGAAGAATTGGAAGATAACGTAACGGATCAGACTCACCATATAGTAGTGCCGTCTTACTCCGCCTGGTTTGACTACAACTCCATACATACAATTGAGAAGCGCGCTCTACCTGAATTCTTCAATGGCAAGAACAAATCTAAGACCCCGGAGATATATCTCGCTTACAGTACTGCTTGTCGGCGCAACCTGGCTGGTGATGTCTGCGCCATCATGCGCGTACATGGCTTCCTGGAGCAGTGGGGACTCCTCAACTACCAGTTGGAGGCGGAATCCCGACCGACGGCGATGGGCCCGCCCCCCACCTCACACTTCCATGTACTGTCCGACACCCCCTCCGGTCTGCAGCCGCTACAGGCAAGACCCACACAGCCCAGACCTGCGGAGAACGCGGCAGTGCCTAAAGTGGAGGCGGGCTTGCCTAATGGTGCGGATGGTGGCGCGCCAGCAGCACCCGCTGCTCCCGCCGCTGCAGCACCCATCAAACAGGAGCCCGCATTGGACCTCGGCAACGTACCAGGTCTCAAACTAGACCAGTACCGCGGTGGTTCACGCGGCCGAGAATGGACGGAGCAGGAGACGCTGTTGCTGCTGGAAGCACTCGAGCTGCACCGCGACGACTGGAACAGGGTCGCGGCGGTCGCGGCGCATGTCGGCACGCGTACGCATGATGAGTGCATACTGCACTTCCTAAGACTGCCCATTGAGGAGCCTTATCTGCAGGATGCAGCATCGGGTGGTGTGCTCGGCCCGCTGGCGTACCAGCCGATACCGTTCAGCAAAGTTGGCAATCCAGTGATGAGTGCGGTGGCATTCCTCGCCTCCGTTGTTGACCCCCGCATCGCCTCGAAAGCCACTCGCGCCGCCATGGACGAGTTCGCAGCTATCAAGGACGAGGTGCCGGCGGCCATGATGGAGGCGCACGTGAAGGCGGCCGGAGCTCATGGACCTGCTGCAGCACTCGCAGCCACAGGCATCGCCGGCACCGCACCTGATGTCAAACCTCCAGGTGAGAAGAAAGAAGAATCTTCTGAGGTGAAGGCTGAGCCCATGGAGGTGGAGGAAGGAGAAGTGAAGGTGAAAGAGGAGGCAGCCGATACACAGCCTAATGATGACACCAAAGACACCAAGGAAACCGCCTCACCATCACCTGCAGAGTCAGGAGGCGGTGGTGCTCCAGCTGCTGCTGGTCAGGTGGAGGCTGGCGTGGCTGCAGCAGCTGCAGCAGCGCTGGCCTCAGCCGCGGTCAAGGCAAAGCATCTCGCTGGAGTCGAGGAGCGCAAGATTAAATCCCTCGTCGCACTTCTCGTTGAAACGCAGATGAAGAAGCTGGAGATCAAGCTGCGGCACTTTGAGGAGTTGGAGGCTACTATGGAAAGGGAGAGAGAAGGTCTGGAGTACCAGCGGCAGCAGTTGATCCAGGAGCGGCAGCAGTTCCACCTGGAGCAGCTGAAGGCGGCAGAGTTCCGCGCACGTCATCAGGCACACCAGAGGTTACAAGCTGAGAGTGGTGTGCTGGGTGGTGTGGTGCAGGCCACACCTGAACAACCGCCACCTGCAGATGTGCCTGCGCAGCCTCTCGCGCCGCCACATCACGCATAG
- Protein Sequence
- MKVFMDMKPGGSLCTVLATMFRFKSEQRWRKFDFQVGKNPSRKDLNVQMMMEIESALMSAEVIRSPCVYIRPDVDKATANKVKDIVSNHQGEICEDEEDATHIIYPTVDPLEEEYARPVFRRGNGALVHWYYLPDSHDIWTQTELPVDVPENVSWECTRSEPWRVSASWALDLPQYNEWMNEEDYEVDANGKKKVHKLRLSVDDLIPGAEPSSKGKKSKRKRSPSPPPQKHGKRKSRISKRRDNEGEDEDDTASRDNTDTAPTPEAERSADTPAAPPPEPPAATEAPATPAPAMDVHDDSQGKHSDSNTQEMLSKEELEDNVTDQTHHIVVPSYSAWFDYNSIHTIEKRALPEFFNGKNKSKTPEIYLAYSTACRRNLAGDVCAIMRVHGFLEQWGLLNYQLEAESRPTAMGPPPTSHFHVLSDTPSGLQPLQARPTQPRPAENAAVPKVEAGLPNGADGGAPAAPAAPAAAAPIKQEPALDLGNVPGLKLDQYRGGSRGREWTEQETLLLLEALELHRDDWNRVAAVAAHVGTRTHDECILHFLRLPIEEPYLQDAASGGVLGPLAYQPIPFSKVGNPVMSAVAFLASVVDPRIASKATRAAMDEFAAIKDEVPAAMMEAHVKAAGAHGPAAALAATGIAGTAPDVKPPGEKKEESSEVKAEPMEVEEGEVKVKEEAADTQPNDDTKDTKETASPSPAESGGGGAPAAAGQVEAGVAAAAAAALASAAVKAKHLAGVEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARHQAHQRLQAESGVLGGVVQATPEQPPPADVPAQPLAPPHHA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01402667;
- 90% Identity
- iTF_01149538; iTF_01140871;
- 80% Identity
- -