Basic Information

Gene Symbol
ct
Assembly
GCA_026167825.1
Location
JAOPJD010000014.1:787486-811506[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.4 1.2e+04 -3.1 0.0 4 19 159 174 157 175 0.82
2 2 2.2e-25 1.8e-21 76.4 0.0 3 70 307 377 305 384 0.92

Sequence Information

Coding Sequence
ATGGCGATATTAGAAAGGCGTACGTTCTTGCATTACCAGCTAATGGAAAAACAACAGAAAAAGCATCGCCTCAAACAGCGAAGTCAGTCGAGTATACAAAGTCGATGCACAAGAGAAGCTTCGGAGGAAAGAGCTGGAAGAAAATTGAAGCCAGTGGAATCGAAGAGCCACGATAAAGGACCGGAGACATTAGCGGCGGATTTACGAGCGGCGACACTTCAACTATTTGCATGCGACCTCCAGCGCCCTCGTGCGGAAAGAATGAGTTCCCTCGGCCATTCTTCAGCGAGATACGCATCGGAAGTTGTCGCCGATGTTATAACAACGCTATATCGTACCATCGCACAGCTAGTAGAGGACGTGCGCAGACTCCAAGCCTCACTATCAGCACTGCAGGAAGCACATTCACAGCAACTGCGACGACTGGAGGAGCGGCTGGACGAGAAAAAGCAACACATCGCCCGCCTCGAAGCCCGCCTCGACACGCAGCGTGACTACGATGACATCAAGCGGGAGATCAGTATGTTGCGGTCTTTAGACCTTAGTTCAGACCGGCCGGTGGACCGCAAGCCTGAGCTGCGGTCTCCCGCCGTCCCGCAAGAGGACCGCGCGTCCGCGGAACGCGAGCGAAGCGCAGAACGAAGAGACACCGGTGGCGACGAGTGGCCGAGCACGCCGCCCCCGCTAAACAACAACACGACGCACCACAACAACAACGGCCCGCTGCCGCTCCCACTGCCGCCGCCGAGTCCTTTCCGCTTCGAGGAGCACCGGCCATACCGCTTCGCGGAGGACATGGGCCCGCTGCCACCTGGAGCGCTCGTCGGTCGCCTGGGAGACTCGCTTATCCCGAAGGGGGATCCGATGGAGGCGCGTCTGCAAGAGATGCTGCGATACAACATGGACAAGTACGCGAACACGAACCTGGACACGCTGCACATCAGCCGGCGAGTGCGGGAACTACTCTCGGTGCATAACATCGGGCAGCGGCTGTTCGCGAAGTACGTGCTGGGCCTGTCGCAGGGCACCGGCACCGTCTCAGAGCTACTCTCGAAGCCGAAACCCTGGGACAAGCTGACAGAGAAGGGCCGAGACTCGTATAGGAAGATGCACGCGTGGGCGTGCGACGAGGCGGCCATCATGCTACTCAAGTCCCTCATTCCCAAAAAAGAACATTGGCAGCAGCTCATTCCGCCGCATGTTATGACACTGGATCGTTTCGTTCAATCAATTGTGCCCCACGAGTCGATCTTCCGTACGGTTTGTGCGCTATCGGCAGCTGTCGACTCGCAGCCCATCAATCAAGGCACGGCCTACTGA
Protein Sequence
MAILERRTFLHYQLMEKQQKKHRLKQRSQSSIQSRCTREASEERAGRKLKPVESKSHDKGPETLAADLRAATLQLFACDLQRPRAERMSSLGHSSARYASEVVADVITTLYRTIAQLVEDVRRLQASLSALQEAHSQQLRRLEERLDEKKQHIARLEARLDTQRDYDDIKREISMLRSLDLSSDRPVDRKPELRSPAVPQEDRASAERERSAERRDTGGDEWPSTPPPLNNNTTHHNNNGPLPLPLPPPSPFRFEEHRPYRFAEDMGPLPPGALVGRLGDSLIPKGDPMEARLQEMLRYNMDKYANTNLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDEAAIMLLKSLIPKKEHWQQLIPPHVMTLDRFVQSIVPHESIFRTVCALSAAVDSQPINQGTAY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-