Ppol009457.1
Basic Information
- Insect
- Papilio polytes
- Gene Symbol
- ARID5B
- Assembly
- GCA_000836215.1
- Location
- NW:564857-612279[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.2e-14 1.4e-10 40.9 0.0 3 89 306 376 304 376 0.91
Sequence Information
- Coding Sequence
- ATGGAGAAACCCTCTTAtaagCTGGTGGGTGCACCTTGCGGTCAACATGGACAGTATACATTCTACAAGGCACTTCGATTGTCAGGCAAGAGGGAGAGGATAGTTGCCATTGGAGACTTCTTCTTTGTCAGGATATGGCAGGATTCAGAGCTCGTGTCAATAGgtgAACTACAATTGTTATGGACAGATCGTGTATCGGACCAAACTCTTGTCAGTTTAAGGCTATACTTCCTACCTGAAAATACGCCTGAAGGGAGATGTCAACATGGAGAGGACGAAGTCCTCGCTATCAATGACAAAGTGGTCGTCAGAGCTGAGGACCTTCTCAGCTGGGTGTCCGAGGGCTCCGGTTGGCGGTGGGGGCTGCGCGCAGTGTGGCGCGGAGCCTGCGCCCCGCCAGCTGACCCAGCAGTGACAGCCCCCCTCCATCATACCAAACTTGACTTCAGTGATGTGGAGAGAGAAAAGAATGCTATGAGTATTGACGCGGATAGTCCCGGAGTGATGGTGTTCTCCTACCCCCGGTATTGTAGGTACCGGGCAATAATCGCCCGACTCGATGGTATGCAAGCGGACTGGTTACGGGACTCTCTGGTTGCCGCATTAGGAGGGTATGCTGCGCCCACAAAGAATACTAGGATTTTATATTGCAAGGAAACATTTGAGTATCCAGAGTTAGAAGGGCATGAATTTGTTTGCAACCACCTCGCCCCGCGACTGAAAGGTCGGCCGCGTGGTCGCAGACGTCGCGCGAGGTCGCGCTCAGCTTCCAGATCTGATAGTGATGATCCTGATGCTATCATGCCCAGAGAATATCCCTTGACGCCGCGACGTCTTTCTTTACGTAACGGTGGTCTTGAACGCCGGAGTGATGAGGACAGCGAGGGCCAGGGGGAGGGACAGAGTGCAGAAGACAGGGAGTTCCTCCAGGAGCTGGGGAAGTTCCACAAGGAGAGGAATGAGGACTATAATACTATGAAACATTTATCGTTGCGTACATTATACGTGGGTGTGTGCGCCCGAGGTGGTTACGAGGCGGTATGTCGCGCACGACTGTGGCCCGCTCTCAGCCATGACCAGCCGGCGAGAGCTCGAAGACACTATGAAAGATATTTACTACCTTTTGAAAATCACGAAAGGAAAAATGGCACTAAATTCCAAAAGATAAACGGCCATGAGCCAAATATAGACacaattgaattaaaagaCTCACCTTTGAGAGAATTGAACTCAATAAAAGGACTGCCAGATAAAAGATTGAGAACTCCATCTCCGAAGAAAGAGAGAGTAGTTCTAGATAATGAGACAGGAGAAGTTGTTAAGACAGAAGAATTAAATCTCACTTCCAAACCTGCAGAGGAATTGAATAGAGAATTTTTAGATTCTTTACCCAAAGAAGATAAGCCTAGTTTGAAAATTTCAGTAAAACCAGTGGAGGAATTGATTGAAAGTGACGGGAAAAGAGATGGATTCTTTAATGAATTGACGCAGAAACTTAATTTGGCAAATGCTGACGCAGCGTTACTGCACCAGCTGGCAGACAGAAAGATGGTGAACGGCCATCCCCCGCACCCGCCGCATCAGCTACCCCCCACTTCATCCCCACTTCTGCAAACAACCCACATACCAGACCAGagGAGCGGGCGTCCTTTGGGCCGTAGTTCTCTGCGCGCTGTGAGAGTGAAGCCCGCGCGCCCCCCGCCCCCACCACCCCCCGCACACCCCCCACCCCACAGCGcATCAGTGCCATTAAGGACGGAGTCAGCTTCCTCCCCACAACCAGCTCTCAATAACTTTGGTATCCACCACCCCCAAACACCCCCCAACGCCAGCCACAGCGACGACGAGATTGTAGAGGTACCCTATAAGCCAAAAACTCCAGAAATAATAGATTTGGATGAATACCCTGAGAGCCCTCAGGGGGTCAAGAAGAAGAAACTCGATATACTAAAAGAACGCGGGCTGGAGGTGACCGCCGTGCCCCCCGCACCCCCCGCCTGGCCTCTCGCACCCCACATGCCACCCCTCGCACCCCTCGTCCTCAACCCCGCCGTGCAGCATCAGATCATGACCCAGGCGCAGCTGTTCCACATGTACAACATCCTCCCCCCACACCTCCCCAACGGAGTACAACCCCCAAAAGTCATACAAGGCACGGGCATCTTCGGCTCAACAGGACCAGAGAAAACCGTATACGGCAACCCCAAAGACCCCTTCATGCCACCCCCACATGTCCTCCATGGGGTCCCCGTCAAACCACAACGCGCTATACAAACACCACCACCACATGACGTACTAGACCTCACCTGCAAACTCACCCCCCAAACCCACATCCCAGCAGTAGAAATAGTAAGAGTACCACCCTCACCCCCAAAAGCACCAACCCCCCAAAATCTATCCAAAAACTACACAGTCATCGACGGAAAAGCAGTCGTCGGCTctaatttagaaataactcTAGTCAACCCCAAATCCCAAACCCCACCGAAACGACCCCCACAAAAAAGGTCCTCCAACGGCAAATTCATGTCAGCGAAAACCCCAACACCCCCCAAAGAGTACCCAAAACCATACCAATCACCAGCTAAGAAGAACCCAATCACCATCCCAACTTACCATACAAGAGACACCTCACCAAGTTCCACTGGCTCTAGGGACTCCAACTTATCCCATAAAAGTCCAAGTTTAGCTCAAATGATGGAACTTAAGTCATCGATGCCACCGATGGCACCATTTATGGATCCAGTGTACATGAATGCGTTGTACAATAGCCTAGGTCATATGGACCAGAGACAGCTGGCGGTCTACCGAGACCTGGTCGCGAGCCAGTTCCGAGGGTATACTGGTCTACTGAATATAGGGACTCCTACAACGAAGAATTAG
- Protein Sequence
- MEKPSYKLVGAPCGQHGQYTFYKALRLSGKRERIVAIGDFFFVRIWQDSELVSIGELQLLWTDRVSDQTLVSLRLYFLPENTPEGRCQHGEDEVLAINDKVVVRAEDLLSWVSEGSGWRWGLRAVWRGACAPPADPAVTAPLHHTKLDFSDVEREKNAMSIDADSPGVMVFSYPRYCRYRAIIARLDGMQADWLRDSLVAALGGYAAPTKNTRILYCKETFEYPELEGHEFVCNHLAPRLKGRPRGRRRRARSRSASRSDSDDPDAIMPREYPLTPRRLSLRNGGLERRSDEDSEGQGEGQSAEDREFLQELGKFHKERNEDYNTMKHLSLRTLYVGVCARGGYEAVCRARLWPALSHDQPARARRHYERYLLPFENHERKNGTKFQKINGHEPNIDTIELKDSPLRELNSIKGLPDKRLRTPSPKKERVVLDNETGEVVKTEELNLTSKPAEELNREFLDSLPKEDKPSLKISVKPVEELIESDGKRDGFFNELTQKLNLANADAALLHQLADRKMVNGHPPHPPHQLPPTSSPLLQTTHIPDQRSGRPLGRSSLRAVRVKPARPPPPPPPAHPPPHSASVPLRTESASSPQPALNNFGIHHPQTPPNASHSDDEIVEVPYKPKTPEIIDLDEYPESPQGVKKKKLDILKERGLEVTAVPPAPPAWPLAPHMPPLAPLVLNPAVQHQIMTQAQLFHMYNILPPHLPNGVQPPKVIQGTGIFGSTGPEKTVYGNPKDPFMPPPHVLHGVPVKPQRAIQTPPPHDVLDLTCKLTPQTHIPAVEIVRVPPSPPKAPTPQNLSKNYTVIDGKAVVGSNLEITLVNPKSQTPPKRPPQKRSSNGKFMSAKTPTPPKEYPKPYQSPAKKNPITIPTYHTRDTSPSSTGSRDSNLSHKSPSLAQMMELKSSMPPMAPFMDPVYMNALYNSLGHMDQRQLAVYRDLVASQFRGYTGLLNIGTPTTKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01144344;
- 90% Identity
- -
- 80% Identity
- -