Pphe005824.2
Basic Information
- Insect
- Papilio phestus
- Gene Symbol
- stc
- Assembly
- GCA_018231625.1
- Location
- DVQH01000522.1:9198-12343[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.4 2.4e+04 -3.0 1.9 15 19 296 300 295 300 0.83 2 15 0.26 4.6e+03 -0.7 0.8 4 10 329 335 328 335 0.95 3 15 2.6e-06 0.046 15.3 13.0 3 19 357 373 356 373 0.95 4 15 1.7e-07 0.003 19.0 12.9 1 19 410 428 410 428 0.98 5 15 1.7e-06 0.031 15.8 15.1 1 19 466 484 466 484 0.99 6 15 2.5 4.5e+04 -3.9 0.6 5 10 518 523 518 523 0.91 7 15 3e-08 0.00054 21.4 15.7 1 18 529 545 529 546 0.97 8 15 0.013 2.3e+02 3.5 8.9 1 11 584 594 584 595 0.94 9 15 0.1 1.8e+03 0.6 0.9 4 10 599 605 597 605 0.91 10 15 7.4e-05 1.3 10.6 11.9 1 19 611 628 611 628 0.94 11 15 3 5.3e+04 -4.3 1.4 6 10 657 661 656 661 0.63 12 15 3 5.3e+04 -10.7 17.2 4 19 665 685 664 685 0.78 13 15 1.6 2.8e+04 -3.2 2.4 9 16 698 705 696 711 0.79 14 15 5.6e-10 1e-05 27.0 14.4 1 19 721 739 721 739 0.97 15 15 0.097 1.7e+03 0.6 5.6 3 11 750 758 749 760 0.91
Sequence Information
- Coding Sequence
- ATGGACCGTGCCAATGGGTTCACAAGACAGCGCCAAGGCGGGCAGTCTGGCCTATCGAGTCGCGGGTTCCCCCCACCTGATCGACAAGAGTATCGCAATTCAAGAGGAGTAAACTATGAGAATCACAATAACCAACAGGGAGGCTATCACTATGACGATCACTATGATAATGGTTTGAATGCCTACAATCGCTATGCACCTGATTATGAGCACACTCGCGAGCGCCGCCGATATTATCCCACAGAATTGCCACCTCGCTTGAGCAGACAACAACAGTTGAATCGTTCCCAACCACACTCAGTGATGCCCGATCGACGAGACAGACAAGAAACGTATCCCACCACACAGACTCAACTGCCACACGACATGAGTCGATTGCGACTTGAAGAGTCCAGACCAGATCATTCCAGACCAAACAATAGAAGTTATGGAATAGAAGGAAATTGGAGAAATCCGTCAATTCTTGCTGAAACCAGTGAGAACCCacagacaaataaaaacaaacaaaattcgGTTCAAGTAAACCATGTCAATTATCAAGGTTCTCGAGGCAACCGCCGTTTTCGAAATCGTACAGTTCCAAATGGCAACGGTGATCAACCAGAAAGTCAGCGAGAGATCATGGACGAACTCTTACGTAAAGTAAAATACGAATGCATGGTGTGCTGTGATATGATTCGAGTTCGCGACAGAACATGGAATTGTGCTAATTGCTACAACGTATTTCACCTCAAATGCATTCAGACGTGGGCTAGGAAGTCGAGCACTAAGATCGCGGAGAACAGCAATGGAAACAATTCGACCAGTGGAAACAACCAAGAAGCAAGTAACTCTGGTCGAGGCCAGTCGACCTCAGCTAGATTCAACAATGACGAGGAGTGGCGATGTCCCACATGTCAAAACGTGCAGCGCAAGTATCCCAGCGCCTACTACTGCTTTTGTGGCCAAGTGCGAGAACCTGAAACAAGCAATTTCCATGTACCACACTCTTGTGGCGAAACCTGTTCACGACAGCTTAGTCTTTTCAACATCAAGCACGATGCAGAAAGTGAGGAGTACTTTGAGTGTAATCATAAGTGCACTCTTATGTGCCATCCAGGAAAGTGCCCGTCGTGTAGTCTCAAAATTGAGCGAACTTGTGCTTGCAATCAAACTAAGATGATCATGAATTGTGTTTCGAAAAGGAGCGAACTCAAATGCGACAATATTTGCAGCAAGTTTTTAGACTGTGGCAAACACCGGTGTGAAACAAAGTGCCACTTTGGTAGTTGTGGCTCATGTCAGAAGTCATTCGAAGTGAAGTGCTTCTGTGGCAAGGAGACGCGAAGTGAGGTTTCTTGTATAGATCAACAGAATGGTTTTAGCTGTCATCAGATTTGTGCAAAGCTCCTCTCTTGTGGCTCTCACACTTGTTCTAAGCCATGTCATTCTGATTCTTGCGGAACTTGCCCTTTTGATCCTCGCACGGTAAATCATTGCCATTGTGGTAAAACTCCTGTTGCAAAGTTAGCCAACCAAAAGCCTCGAGTGCTATGCACTGACCCTATTCCGACATGCTCGTTGGTGTGTTCCAAGCCGCTGCCCTGCGGACACCAATGCAAACGGATTTGTCATCCCGGAAATTGTCCTCCTTGTGATCTAACAAATGTGATTCGCTGCGAGTGTGGTGCCAACTCTCAAAAGTTTGAATGCCAAGATCTCACATCTCTTCAATACAAGTGCAAGCGACGatgtaaaaagaaattgagCTGTGGACGGCACAAGTGTCCAAATGAATGCTGTACTGACAGCGTACACTTCTGTCAGCAGACATGTGGCCGCAAGTTGGAATGTGGACTGCACACCTGTGCCGAGCCATGTCACTCATTCTGTCGACCCTGTCCCAATGTGATCTGGACTGAGGTTTACTGCAACTGCGGTAATTCATCTCTATTTCCTCCATTGCCTTGCAATACGAAAAAACCTCCATGTGATAGACCGTGCAACCGAGAGCACAGATGCCAACATCCTCCAACTCACCAGTGTCACGACGAACCGCAGTGTCCGCCGTGTACCGAATTTGTGAGCATGCTGTGCTACGGTGGCCACGAGGAGTGCCACACTGTGCCATGCTATGTCAATGGCGTTTCGTGTGGACGCTTTTGCATGCGGCAACTACCTTGTGGTCTTCACAAGTGCACCAAGGTTTGTCACGAAGGTGAATGTCCTCCGTGTACGCAAAAGTGTGTCAAGCAACGCGTGGGATGTCAGCACCCATGTAACCTACCTTGTCATCAGGCAAGTTCTTTAGACTGCCCCGAGAGTCTGTGTAGAGTAAAAGTTCATGTAACGTGCGAATGTGAATTCAAAAGTGAAGATGTGGAGTGCCATGAAGTAAATGATTCGAGCCGATACCAACAAGCATTGGATGAAATGGTCCGACGTTTCCGCTTTAACACCTCTATTACGCTGGACGAACTCAAAAACATGATTCACTATAATAATCTGCATTCATTGTCATGCGACGAGAAATGCTTGAAGGAGAAACGCAACCGTGATCTGGCCGAAGCTCTTGGAATTGATGCCAATCAGGTAGGCAGTGTCAAGTACACAGACCAGCTCAAAAGTGAGGCACGAGCAAACCCAGAATTTATTCTAAAGGTGCACGACAAGTTTGTAGATCTTATCACCACTTTCAAAAAGagcaacaataaaacaatgtgcTATAATTTTTCCGCGATGAATCGAGCAAATCGTGAGATGATTCACAACTATGCAGCCTTTTTTGGACTCAAAACTGAATCAGTGGACAAGGAACCTAACCGAAGCGTGATTATTACAGCTAACAGTGCTTCGTTTATCCCGCCCTTGTCACTTCTTGAGAGCGTTCACATCGACCCTAACCAACTGAGACCTAAGCCTTCTGTGGTGAAGTACAAGCGTGCAAGTGAAGAGaacaagaacaaaaacaaaattgactaCTTTGATTTTGAAGATTAA
- Protein Sequence
- MDRANGFTRQRQGGQSGLSSRGFPPPDRQEYRNSRGVNYENHNNQQGGYHYDDHYDNGLNAYNRYAPDYEHTRERRRYYPTELPPRLSRQQQLNRSQPHSVMPDRRDRQETYPTTQTQLPHDMSRLRLEESRPDHSRPNNRSYGIEGNWRNPSILAETSENPQTNKNKQNSVQVNHVNYQGSRGNRRFRNRTVPNGNGDQPESQREIMDELLRKVKYECMVCCDMIRVRDRTWNCANCYNVFHLKCIQTWARKSSTKIAENSNGNNSTSGNNQEASNSGRGQSTSARFNNDEEWRCPTCQNVQRKYPSAYYCFCGQVREPETSNFHVPHSCGETCSRQLSLFNIKHDAESEEYFECNHKCTLMCHPGKCPSCSLKIERTCACNQTKMIMNCVSKRSELKCDNICSKFLDCGKHRCETKCHFGSCGSCQKSFEVKCFCGKETRSEVSCIDQQNGFSCHQICAKLLSCGSHTCSKPCHSDSCGTCPFDPRTVNHCHCGKTPVAKLANQKPRVLCTDPIPTCSLVCSKPLPCGHQCKRICHPGNCPPCDLTNVIRCECGANSQKFECQDLTSLQYKCKRRCKKKLSCGRHKCPNECCTDSVHFCQQTCGRKLECGLHTCAEPCHSFCRPCPNVIWTEVYCNCGNSSLFPPLPCNTKKPPCDRPCNREHRCQHPPTHQCHDEPQCPPCTEFVSMLCYGGHEECHTVPCYVNGVSCGRFCMRQLPCGLHKCTKVCHEGECPPCTQKCVKQRVGCQHPCNLPCHQASSLDCPESLCRVKVHVTCECEFKSEDVECHEVNDSSRYQQALDEMVRRFRFNTSITLDELKNMIHYNNLHSLSCDEKCLKEKRNRDLAEALGIDANQVGSVKYTDQLKSEARANPEFILKVHDKFVDLITTFKKSNNKTMCYNFSAMNRANREMIHNYAAFFGLKTESVDKEPNRSVIITANSASFIPPLSLLESVHIDPNQLRPKPSVVKYKRASEENKNKNKIDYFDFED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -