Basic Information

Insect: Papilio phestus
Gene Symbol: zfh1
Assembly: GCA_018231625.1
Location: DVQH01002336.1:1270-9335[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.13 16 7.7 0.4 1 23 84 106 84 106 0.94

2 8 3.5e-05 0.0042 19.0 4.4 1 23 117 139 117 139 0.98

3 8 1.6e-06 0.00019 23.2 6.1 1 23 148 170 148 170 0.99

4 8 0.0011 0.13 14.3 1.4 1 20 176 195 176 197 0.94

5 8 0.00047 0.055 15.4 0.3 1 21 453 473 453 474 0.94

6 8 1e-05 0.0012 20.7 1.4 1 23 772 794 772 794 0.94

7 8 2.4e-05 0.0028 19.5 7.4 1 23 800 822 800 822 0.98

8 8 0.087 10 8.3 7.1 1 21 828 848 828 849 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.13	16	7.7	0.4	1	23	84	106	84	106	0.94
2	8	3.5e-05	0.0042	19.0	4.4	1	23	117	139	117	139	0.98
3	8	1.6e-06	0.00019	23.2	6.1	1	23	148	170	148	170	0.99
4	8	0.0011	0.13	14.3	1.4	1	20	176	195	176	197	0.94
5	8	0.00047	0.055	15.4	0.3	1	21	453	473	453	474	0.94
6	8	1e-05	0.0012	20.7	1.4	1	23	772	794	772	794	0.94
7	8	2.4e-05	0.0028	19.5	7.4	1	23	800	822	800	822	0.98
8	8	0.087	10	8.3	7.1	1	21	828	848	828	849	0.96

Sequence Information

Coding Sequence: ATGAAAGTGCACAGCTCGCTTATGGGAGTGGGCGGCTGGTGCGAGCGCCTGGCGGCCGGCTGGCTGGCCGACATGAGGAGTAAGCAGGTCCCCACTTCCACCACCTCGGCCAGGCTCGCCGCATTCATCCGCCCGCTAGGAGGCACAGGCGTAGGTGCGGGTGGGAGCGCGAGCGGGGCCGTGGAGGGCGCGGCAGCGGGCGAGGAGGAGGAGGACCGCGGAGGGTCACCGCTGGGCCCCGGCGGGCCCCACCGCTGTGCGCAGTGTCGCGGCGCCTACCCATCGCGTGCGCAGCTCGAGCGGCACGAGACACTGCACGCGCCCAGCACTCAGGTGGATACCCTGCAATATACTTGCAAGATCTGCCACAAGAGCTTCCAGAACGTGTACCGGCTGCAGCGGCATATGCTGAGCCACGACGAGAGCGCCGTCCTGCGCAAGTACAAGTGCAACGACTGCGACAAGGCGTTCAAGTTCAAGCACCACCTGAAGGAACACCTCCGCATACACAGCGGCGAAAAGCCCTTCGAATGCGCCAACTGTGGCAAGAAGTTCTCCCACTCGGGCTCCTACTCTAGCCACACCACATCCAAGAAGTGCCTCGTTATGAACCTCAAGATGGGCCGGATCAAACCCAACAACCCGGCGCTCAACCCCAACCGTAGCCCGGCGCGGAAACGCGCCTCCGCGAGTGCGCTGGTCGCCTCTCACCTAAACAACAACCTGCTGCCTAACGGCGCCTTCCTGCCCCTCATGCCGAAGTACAACGACGCGACTGCCTTCTTCGCTTCGATGTCTGCGCAAGATAATAACTTCTCCCGCGCACCCCTCCCCCAGCCAACGCTCAACCCCTTCTATCTGCCGACCGGAGTGCCCCTCAGCCCAGCGGCCGGCATCGCGCCCTATAGCTTTCCTTCCACTCTCAGCCAACTCTTCGAGCGAATTGCTTCGACACAGTATCAtcagagaaaaatagagaatgtAATTGATGCAACATTAAGTAGTCCTCGCGCGACGAACCCTGAGGACATGATAGAAGAAATCACAGAGGAAGATGACAAGCGATCCGAGGGCAGCGCGGAGCTCGTCATGGACATAGAGGATGACGAATCGGTAGCtattaaaagagaaaacgaAAATATGGAAAACGATTTTAGGCCGAGGTCCCCCGACTCGATTTGTGaatccaaaaatatttcaGACAATGTTAAACACGATATCGTTATATCACCCAGGAAGCGCCGAGCGGAACATCTCTATATGGAAAGAATAAAAAGCGGATCTCCTGCGGACGAAACATACCCCGCGAGGGAGCTTTCACCCCGGATTACGATAAAAGACGAGGTCGTCGACGACTTCGTATGCTATAAATGTAGTATGTCTTTCAAAGACAAAAGTGATCTAATAGAGCACGAGAAGTTAGTCTGCGGCAAACTCTTTAGGAAGCACGAAGGTCTCGCCGCTCAGGTGGCCGAGACCGTGGCGCTCAGTAGACTGGAGGCCGAGCTGCGGGCGAGCGCGCGCGGCGCCGGCGCCAGCGACGACGACGACACGGTTACGACGCGGGAGGATCGCGACGACAAAATGTCGATCCACGATACGGATAGGAAAATCAGAGTGCGAACCGCGTTGAGCGAGGAGCAGCAGcaagttttaaaagaatacTACGCAGTAAATTCTCGACCAAATAGGGAAGAATTCAAGAAAATCGCACAACAAATTGGTTTGGACAACCGAGTCGTTCAAGTGTGGTTCCAAAACAATAGAGCCAGGGTGCGGAGAATGACACAACCCGTCGTCCACTCGGATCAACCGCTCGATTTGTCAACCAAGAAGTCGAGTCCGTCCCTGGCGTCCAGCCCGAGCCCGTCGTCGCCCGGCAGCGCGCCTGCCACGCCCGGCACCCCCGCGCTCTCCGACTGCGAGGAGGCGGTGAACCTGAGTCAGAAGTCGTCGCGCAGCACCACGCCGCTGCGTGCGCCGCCGGGCCTGGCCGCCCCCGCCTACCCGCCTTCCAACTGctcctcctcctctttctCCGACTTTATGGTGTCGCCCTCGCCGGTGGACGTAGTGCTCGGACACAAACGAATGTTCTCCAAAAAGTTGTCCGTCAATCCAATGATACCGATGGATACTCTCCTACAATACAACGACATGGCGCGGGTGCCTGCGCCCAGTCCGGGCTACGAGCGCGCCGAACGCGGCGAGCGCGCCGCCTGGGACGAGGCGCCGCTACCGGCCGACTTCGACGACGACGCAGcactgtttaaaaagaaaatgaaaacggAACTGAAAGAAGGGGAGGGACAATTCGTGTGCAATCAGTGCGATAAGACCTTTGTCAAACAAAGTTCACTCGCGCGGCACAAGTACGAGCACTCAGGTCAGCGGCCGTACAAGTGCGAGGAGTGCCCGAAAGCGTTCAAGCACAAGCACCACCTCACGGAGCACAAGCGGCTGCACACGGGCGAGAAGCCCTTCCAGTGCTGCAAGTGCCTCAAGAAGTTCTCGCACTCCGGCTCCTACAGCCAGCACATGAACCACCGCTTCGCCATCTGCAAGCCCTACAGGGACTAG
Protein Sequence: MKVHSSLMGVGGWCERLAAGWLADMRSKQVPTSTTSARLAAFIRPLGGTGVGAGGSASGAVEGAAAGEEEEDRGGSPLGPGGPHRCAQCRGAYPSRAQLERHETLHAPSTQVDTLQYTCKICHKSFQNVYRLQRHMLSHDESAVLRKYKCNDCDKAFKFKHHLKEHLRIHSGEKPFECANCGKKFSHSGSYSSHTTSKKCLVMNLKMGRIKPNNPALNPNRSPARKRASASALVASHLNNNLLPNGAFLPLMPKYNDATAFFASMSAQDNNFSRAPLPQPTLNPFYLPTGVPLSPAAGIAPYSFPSTLSQLFERIASTQYHQRKIENVIDATLSSPRATNPEDMIEEITEEDDKRSEGSAELVMDIEDDESVAIKRENENMENDFRPRSPDSICESKNISDNVKHDIVISPRKRRAEHLYMERIKSGSPADETYPARELSPRITIKDEVVDDFVCYKCSMSFKDKSDLIEHEKLVCGKLFRKHEGLAAQVAETVALSRLEAELRASARGAGASDDDDTVTTREDRDDKMSIHDTDRKIRVRTALSEEQQQVLKEYYAVNSRPNREEFKKIAQQIGLDNRVVQVWFQNNRARVRRMTQPVVHSDQPLDLSTKKSSPSLASSPSPSSPGSAPATPGTPALSDCEEAVNLSQKSSRSTTPLRAPPGLAAPAYPPSNCSSSSFSDFMVSPSPVDVVLGHKRMFSKKLSVNPMIPMDTLLQYNDMARVPAPSPGYERAERGERAAWDEAPLPADFDDDAALFKKKMKTELKEGEGQFVCNQCDKTFVKQSSLARHKYEHSGQRPYKCEECPKAFKHKHHLTEHKRLHTGEKPFQCCKCLKKFSHSGSYSQHMNHRFAICKPYRD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01140831;
90% Identity: iTF_01147606;
80% Identity: iTF_01146051;