Pphe028457.1
Basic Information
- Insect
- Papilio phestus
- Gene Symbol
- ZNF711_1
- Assembly
- GCA_018231625.1
- Location
- DVQH01026995.1:141-2003[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.056 6.6 8.9 0.2 1 23 43 67 43 67 0.97 2 11 0.00035 0.041 15.8 6.2 3 23 103 123 102 123 0.99 3 11 3.5e-05 0.0042 19.0 1.0 1 23 129 152 129 152 0.98 4 11 0.094 11 8.2 0.6 1 19 158 178 158 183 0.96 5 11 0.00017 0.02 16.8 5.9 2 23 405 426 404 426 0.97 6 11 6.2e-06 0.00072 21.4 1.2 1 23 432 455 432 455 0.96 7 11 0.05 5.9 9.0 0.2 1 21 461 481 461 482 0.95 8 11 0.00011 0.013 17.4 7.2 2 23 494 515 494 515 0.97 9 11 2.3e-06 0.00027 22.7 2.5 1 23 521 544 521 544 0.96 10 11 0.00025 0.029 16.3 0.1 1 23 550 572 550 572 0.97 11 11 0.59 69 5.7 5.6 1 23 578 601 578 601 0.93
Sequence Information
- Coding Sequence
- ATGGCTCAAGTCTATACTCCTACCACCATAAATCTATCTCATTTGTACTCGTGTCACTACTGTTGCCAGTGCACCAAACCATGGTTTCAATTTGAGTCGGAACTCGAACATCACATGCGTCAGCTACACCAATGTGACCACTGTCCGGCACTAGTCTTCACCGCTTTGGCCGATCTGGTGATTCACCTCAAAACAATGCATAGTAATAGTAGTCTGTCTGCAATAAATCAGTCAATCAATGGAAAAGAAATTGATGGATCTCACAAGTTATTATTAAGCAAATCAGTCGAAACTCGAGGTACTCTTTGTTCCCAATGCGGAAAGCGCTGCCAATCGCCGTTTCACCTCCGAAGACATCTTCGAACTCATACTGGTGAAAAGCCCTTTAGGTGTGAGGAGTGTTCCAGAAACTTCTCCGCCAACGACAAACTTCTGCGACACCTACGAAAGGTGCATTCTCGGGGGATGCCGTTCAAATGTGAGAAATGCACCGATTTGCGAGTCTTTGCTACCCAATCACTTCTTGACAGGCATGATTTCAGCATGCACCCTAGGAGgaaaaatttaccaaaaacaaCTTCTGTAAATAACGATAAAGATGAGTTAGAACAAGGAACAAACATTAATGCAGACAATCAAGCTCAAGTTAAGAGAATTTCTCTAGATAACCAAAAACAAACTCATCAATCAGTTAACACTAAAGTTTTAAACCCTCTTGTTTATGCCAAAGCGAAATCTCGTGTAAATAACGATAAAGATGATCTTGAACAAAGAACAGACATTCATTATGCAAATCAAGCTCATCGATCAGTTAACACTGAACACGTTTTAAATCTTGTTGATGCCAAAACGGAATCTCTTGTGAATAACGATAAAGATGAGCTGGAACTTTATGCAAATCAAGCTCAAATTAAGAGAATTTCTCTAGATAACCAAAAAGAAACTCACCAATCATCTAACACTGAAGTTATGAACTTTCTAGTTGATGCTGAGGGGAaatctcttgtaaataaagatGAAGATAATCGGGAACAAAGAACAGACATTCAAGctcaatttacaagaatttttcCAGATAACCAAAAAGATACTCACCAACCTGCTAACACGAAAGTTTTAAACCCTCTTGTTGATGCAGAAGAAAAATCTCTTGAAATAACCGTTTCCCCCGATTCACAGTTGAATCATGATCAAGTAGAAAACGATCCTCTTCGTTGTTCCCACTGTGATAGGCGCTTTCAATCGTCATACCATGTAAAAAGACACATTCTCACGCACACCGGAGAGAAGCCTTTCAAGTGTGACAAGTGTTCTAAAAGGTTTTCGCTAAAAAGCAATCTAGTTCAACATGTACGTGGAGTGCATGATCGAGTTTGGCAGTTCAAATGTCCAAAGTGTTTGGTTCGGCTCGACACCAAGGAGAAATTGGAAAGTCATATTTCAAGTCAAAAGTGTGAAATCCTAACGGAAGACGTCAATTCATGTGAGCATTGTAATAAGAGCTTTCAATCGGCGCATCACTTGAAAGTGCATCTACGTTCGCACACCGGTCAAAAGCCATTTTGTTGCGGCAAGTGTTCAAAGAGCTTTACGACCAAGGGAAATCTACAAGCACACATCAGTCGAGTGCACGATGGCATACGGGAGTTTGTGTGCGGCGAGTGCCGAGCGGGATTTGCAACCAAAACCGAGCTCACTCGGCACGGGAGGTTGCATACGGGGGAGAAGCCGTACCAGTGTCCGCATTGTTCGGTTTGCTTTCGGTGGAAGAGCAGCTGTCAGATGCACTTGCAAGTGGTCCATCAGGAGCAAGCAAATTTACAGACTAAACTTGTAGTGGCATTAAAAACCAATATTatgtaa
- Protein Sequence
- MAQVYTPTTINLSHLYSCHYCCQCTKPWFQFESELEHHMRQLHQCDHCPALVFTALADLVIHLKTMHSNSSLSAINQSINGKEIDGSHKLLLSKSVETRGTLCSQCGKRCQSPFHLRRHLRTHTGEKPFRCEECSRNFSANDKLLRHLRKVHSRGMPFKCEKCTDLRVFATQSLLDRHDFSMHPRRKNLPKTTSVNNDKDELEQGTNINADNQAQVKRISLDNQKQTHQSVNTKVLNPLVYAKAKSRVNNDKDDLEQRTDIHYANQAHRSVNTEHVLNLVDAKTESLVNNDKDELELYANQAQIKRISLDNQKETHQSSNTEVMNFLVDAEGKSLVNKDEDNREQRTDIQAQFTRIFPDNQKDTHQPANTKVLNPLVDAEEKSLEITVSPDSQLNHDQVENDPLRCSHCDRRFQSSYHVKRHILTHTGEKPFKCDKCSKRFSLKSNLVQHVRGVHDRVWQFKCPKCLVRLDTKEKLESHISSQKCEILTEDVNSCEHCNKSFQSAHHLKVHLRSHTGQKPFCCGKCSKSFTTKGNLQAHISRVHDGIREFVCGECRAGFATKTELTRHGRLHTGEKPYQCPHCSVCFRWKSSCQMHLQVVHQEQANLQTKLVVALKTNIM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -