Pphe024774.1
Basic Information
- Insect
- Papilio phestus
- Gene Symbol
- MAZ_1
- Assembly
- GCA_018231625.1
- Location
- DVQH01019989.1:1361-3157[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.0005 0.059 15.3 1.0 1 21 10 30 10 31 0.94 2 16 0.0032 0.37 12.8 2.7 1 23 37 60 37 60 0.96 3 16 0.0023 0.27 13.3 3.9 2 23 69 90 69 90 0.97 4 16 0.0081 0.95 11.5 0.0 1 23 96 119 96 119 0.90 5 16 0.0028 0.33 13.0 4.0 1 23 119 142 119 142 0.96 6 16 5.9 6.9e+02 2.5 0.2 9 23 233 248 231 248 0.83 7 16 0.0033 0.39 12.8 4.2 1 23 248 271 248 271 0.96 8 16 0.94 1.1e+02 5.0 4.5 2 23 306 328 305 328 0.94 9 16 0.00022 0.026 16.5 0.5 2 23 333 355 333 355 0.97 10 16 0.19 23 7.2 0.4 1 23 363 385 363 385 0.96 11 16 0.0028 0.33 13.0 1.7 1 18 391 408 391 408 0.94 12 16 4e-05 0.0047 18.8 0.2 1 23 418 441 418 441 0.97 13 16 0.00026 0.03 16.3 2.7 2 23 488 510 487 510 0.93 14 16 0.088 10 8.3 4.1 1 23 514 537 514 537 0.97 15 16 0.00028 0.033 16.1 0.9 1 23 545 567 545 567 0.98 16 16 0.00011 0.013 17.4 0.5 1 23 573 595 573 595 0.97
Sequence Information
- Coding Sequence
- ATGCTAAGTCATACAACGGAAAAACCGTTTCACTGTGAAGTGTGCGAAACGAGATTCAAAAGTCAAGAATTGTTACGAAATCATGTTAAGAATATTCTCTCGGGCGAGTATAGATGCGTCGAATGTGAGGAAGACTTCGAATCCAAACACCGACTTCGAAAGCATCAATTTCGTGTGCATACGGACAAATCGAAATATCGTAATCGGTGCCACCAATGTTCGAAAGTATTTATGTTTCCAAATCAACTGTTACATCATCAATTGGTTCATACGAAAAAGGCGCCTTACGCTTGTGATTGGTGCCGTATGGAGTTTGTAAGGAAGGCTGACCTTGCACAGCACAGTGTAAAATGGCACCAGTGTAAGGTGTGCTCGAAGATTTGTGAGTctaaattcaaacttaatcAGCATATGTTACAAGAGCACAGTTTATCTAAGGGAACTTTTTCTTCTAAGGACTTTGCGACTACTACTACTCATCAAAAAGATATCAATCAGCATATGTTACAAGAGCATAGTTTATCTAAGGGAACTTTTTCTTCTAAGGACTTTGCGACTACTACTAATGAACAAAAAGATATCAATCAGCTTATGTTACAAGAGCATAGTTCATCTAAGGGAACTTCTTCTTCTAAGGACTTTGCGACTTCTACTACTCATCAAAAGAATCTAAATCATTCATCGCCAAAAGAGATGGAATTTGTAAGGAAGTTTAACCTTACACAGCACAGTGTAAAATGGCACCAGTGTAAGGTGTGCTCAAAGATTTGTGAATCTAAATTCAAGCTTAATCAGCATATGTTACAAGAGCACAGTGCATCTAAGGGAACTTCTTCTAAGGACTTTACGATTACGACTACTACTCATCAAAATGACCTGAATCATTCAACGGAGATTAACGAGGAGAGCCACCTAAGTTGTCCGGTGTGTCGGAAGCAATTCAAATGCAAATCGGGACGTCGTAAGCATTGGAAAAATTTTCACCTTACCGAAGCCAAATGCGCAGAATGTCAACAAAGTTTTCGATCCAAATGGAATCTGGATATGCATATTCTAAGGGAACATACGGATTTATCCGAGCTTGCTCACGTTTGTCCCGTATGCAAGTTGGCCTTCTTGAATGGGGGAAAAATGAAATCCCATCTTTTGACACACTGCAAAGCAAAGAAATTTGTGTGTAAAACTTGTGACCGAAGATTCAAGTATCAAAGCGATCTATTTCGAGACGAGAAAAATGTCCATCAAACCGAGTATCGATGCGAGGAGTGTTGGGAAAGTTTTCCCTCACAATACAAACTTAACGGGCACATCTTGAGAGTTCACGGGGGAGAATGTGGGAGAAAACGCATCTGCTACAAGTGCGAATTGGATCATTCACCGTCCAAATGTCCCAAATtggagaattcgaatcgaaaccCAAAGGTTAACGGGAATTTTCTCCATTCAATCAATGCACCGATTGTTTGTCACCAATGCAAAGTGCAATTCAAACGTCAAACGAATTTGAGGAAACatgtttcaaatttacattCGGGCGAATATAGATGTAAGGAGTGTTTGGCGTTGTTCGAATCCAAACACCGACTTAAGACACACATGTTTCGAACTCATCAGGATCCGAACGAGTGTCGTCATCGTTGTCGGGTGTGCAAAATGGCTTTCATGTATCCAACTCAATTGGAGGCTCACATGTTGAGCCATACCAATGAGACACCGTTTGTGTGTGAGATTTGTCAGATTGGATTCAAGAAAAGGTTTTCCCTTAACAAACATGCccgtgcgcatgcgcattcaTGA
- Protein Sequence
- MLSHTTEKPFHCEVCETRFKSQELLRNHVKNILSGEYRCVECEEDFESKHRLRKHQFRVHTDKSKYRNRCHQCSKVFMFPNQLLHHQLVHTKKAPYACDWCRMEFVRKADLAQHSVKWHQCKVCSKICESKFKLNQHMLQEHSLSKGTFSSKDFATTTTHQKDINQHMLQEHSLSKGTFSSKDFATTTNEQKDINQLMLQEHSSSKGTSSSKDFATSTTHQKNLNHSSPKEMEFVRKFNLTQHSVKWHQCKVCSKICESKFKLNQHMLQEHSASKGTSSKDFTITTTTHQNDLNHSTEINEESHLSCPVCRKQFKCKSGRRKHWKNFHLTEAKCAECQQSFRSKWNLDMHILREHTDLSELAHVCPVCKLAFLNGGKMKSHLLTHCKAKKFVCKTCDRRFKYQSDLFRDEKNVHQTEYRCEECWESFPSQYKLNGHILRVHGGECGRKRICYKCELDHSPSKCPKLENSNRNPKVNGNFLHSINAPIVCHQCKVQFKRQTNLRKHVSNLHSGEYRCKECLALFESKHRLKTHMFRTHQDPNECRHRCRVCKMAFMYPTQLEAHMLSHTNETPFVCEICQIGFKKRFSLNKHARAHAHS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -