Basic Information

Insect: Papilio phestus
Gene Symbol: -
Assembly: GCA_018231625.1
Location: DVQH01001868.1:1-8116[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0018 0.21 13.6 4.0 3 23 1 21 1 21 0.99

2 17 2.3e-05 0.0028 19.5 5.3 1 23 27 49 27 49 0.97

3 17 0.00072 0.085 14.8 10.1 1 23 55 77 55 77 0.97

4 17 6.1e-07 7.2e-05 24.5 2.7 1 23 83 105 83 105 0.97

5 17 6.4e-05 0.0076 18.1 6.7 1 23 111 133 111 133 0.97

6 17 0.00021 0.025 16.5 5.5 1 23 139 161 139 161 0.97

7 17 3.1e-07 3.6e-05 25.4 1.9 1 23 167 189 167 189 0.98

8 17 7.6e-06 0.00089 21.1 7.9 1 23 195 217 195 217 0.98

9 17 3.2e-05 0.0037 19.1 6.3 1 23 223 245 223 245 0.98

10 17 1.5e-05 0.0018 20.1 6.6 1 23 251 273 251 273 0.98

11 17 6.1e-06 0.00072 21.4 4.9 1 23 279 301 279 301 0.97

12 17 5.6e-05 0.0066 18.3 7.2 1 23 307 329 307 329 0.97

13 17 7.7e-06 0.0009 21.1 5.8 1 23 335 357 335 357 0.98

14 17 1.6e-06 0.00019 23.2 6.1 1 23 363 385 363 385 0.97

15 17 3.3e-06 0.00038 22.2 3.7 1 23 391 413 391 413 0.96

16 17 0.00034 0.04 15.9 0.3 1 23 420 442 420 442 0.97

17 17 0.0016 0.18 13.8 4.5 1 23 451 473 451 473 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0018	0.21	13.6	4.0	3	23	1	21	1	21	0.99
2	17	2.3e-05	0.0028	19.5	5.3	1	23	27	49	27	49	0.97
3	17	0.00072	0.085	14.8	10.1	1	23	55	77	55	77	0.97
4	17	6.1e-07	7.2e-05	24.5	2.7	1	23	83	105	83	105	0.97
5	17	6.4e-05	0.0076	18.1	6.7	1	23	111	133	111	133	0.97
6	17	0.00021	0.025	16.5	5.5	1	23	139	161	139	161	0.97
7	17	3.1e-07	3.6e-05	25.4	1.9	1	23	167	189	167	189	0.98
8	17	7.6e-06	0.00089	21.1	7.9	1	23	195	217	195	217	0.98
9	17	3.2e-05	0.0037	19.1	6.3	1	23	223	245	223	245	0.98
10	17	1.5e-05	0.0018	20.1	6.6	1	23	251	273	251	273	0.98
11	17	6.1e-06	0.00072	21.4	4.9	1	23	279	301	279	301	0.97
12	17	5.6e-05	0.0066	18.3	7.2	1	23	307	329	307	329	0.97
13	17	7.7e-06	0.0009	21.1	5.8	1	23	335	357	335	357	0.98
14	17	1.6e-06	0.00019	23.2	6.1	1	23	363	385	363	385	0.97
15	17	3.3e-06	0.00038	22.2	3.7	1	23	391	413	391	413	0.96
16	17	0.00034	0.04	15.9	0.3	1	23	420	442	420	442	0.97
17	17	0.0016	0.18	13.8	4.5	1	23	451	473	451	473	0.99

Sequence Information

Coding Sequence: tgtCAGTTCTGCGCGAAGACATTCACGCGCAAGGAGCACATGGTGAACCACGTGCGCAAGCACACGGGCGAGACGCCGCACCGCTGCGACATCTGCAAGAAGAGCTTCACGCGCAAGGAGCACTTCATGAACCACGTCATGTGGCACACAGGTGAAACGCCGCATCATTGTCACATATGTTTGAAGAAGTATACTAGGAAGGAGCATTTAGTGAACCATATGCGATCTCACACGAACGACACACCGTTCCGATGTGAGTTGTGTGGCAAGTCCTTCACCAGAAAGGAACACTACACCAATCACATTCTCTGGCATACTGGCGAAACACCGCATCGTTGCGACTTCTGTTCGAAAACATTCACCCGCAAGGAGCACCTCTTGAACCACGTGCGGCAACACACGGGCGAGTCGCCGCACCGCTGCAGTTTCTGCGCCAAGTCCTTCACACGCCGCGAACACCTCGTCAACCATGTGCGACAGCACACTGGCGAGACGCCGTTCCAGTGCGGGTACTGCCCTAAGGCGTTCACCAGGAAAGATCATTTAGTGAACCACGTTCGTCAGCACACCGGGGAGTCCCCGCACAAGTGCTCGTACTGCACGAAGACGTTCACTCGCAAGGAGCATCTCACCAACCACGTGCGGCAACACACGGGCGAGTCGCCGCACCGCTGCACCTACTGCGCCAAGTCCTTCACGCGCAAGGAGCACCTCGCCAACCACACCAGACAGCATACGGGCGAAACTCCTCACAAGTGCACGTACTGCACGCGGTCGTTCGCGCGCAAGGAGCACCTCACGAACCACGTGCGCCAGCACACCGGCGACATGCCGCATCCCTGCTCCTACTGCAACAAGCGGTTCACGCGCAAGGAGCACCTCGTCAACCACGTGCGACTGCATACGGGCGAGACTCCGTTCAAGTGCACGTATTGCACGAAGGAGTTCTCCCGCAAGGAGCACCTCACCAACCACGTGCACCAGCACACCGGGGAGACGCCGCACAAGTGCCCCTTCTGCACCAAGACCTACTCCCGCAAGGAGCATTTGACCAACCACGTCAGAATCCACACGGGCGAGTCGCCGCACCGCTGCGAGTACTGCGACAAGACGTTCACGCGCAAGGAGCACCTCATCAACCACCTGAAGCAGCACACGGGCGACACGCCGCACGCCTGCAAGGTCTGCTCCAAGCCCTTCACCAGGAAGGAGCATCTCATGACGCATATGAGAGCACACAACTGCGGCGAGAGACCGTACTCGTGCGGGGAGTGCGGCAAGTCGTTTCCGTTGAAAGGCAATCTGCTGTTCCACGAGCGGTCGCATCAGAAGGGCGGCGGAAACAGACCCTTCAGATGCGATATTTGCTCCAAGGACTTCATTTGCAAAGGTCACTTGGTGTCACACCAGCGCACGCACCAGACGGCGGGTGAGACTGCGGCCGGTGAGCAGCAGCCCGCCGCGCCCGTCGCCCCCGACGCAGCCAAGGACGCCGCGGACCGTGCTGACCGCAAACACGACGTCAGAGCAACAAATAACGAAAACAGACCGACAGAAGAAGAGGTCGCCCAGAGTCAGCAAAATAATGCTGTTATGCAAATTACTAGCCAGGTCCGAGGCGGTACGAGCAGCGCGACCAGTGTGGCGACGTTTACGCACACGCCTAGCGCGCAGCACCACGCCGGCGGTGTCGCGCACCATCCCGTCACCGTCAACTACTAG
Protein Sequence: CQFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCHICLKKYTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHYTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSFCAKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSYCTKTFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLANHTRQHTGETPHKCTYCTRSFARKEHLTNHVRQHTGDMPHPCSYCNKRFTRKEHLVNHVRLHTGETPFKCTYCTKEFSRKEHLTNHVHQHTGETPHKCPFCTKTYSRKEHLTNHVRIHTGESPHRCEYCDKTFTRKEHLINHLKQHTGDTPHACKVCSKPFTRKEHLMTHMRAHNCGERPYSCGECGKSFPLKGNLLFHERSHQKGGGNRPFRCDICSKDFICKGHLVSHQRTHQTAGETAAGEQQPAAPVAPDAAKDAADRADRKHDVRATNNENRPTEEEVAQSQQNNAVMQITSQVRGGTSSATSVATFTHTPSAQHHAGGVAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: iTF_01139709;
80% Identity: -