Basic Information

Gene Symbol
ct
Assembly
GCA_018231625.1
Location
DVQH01000243.1:1617-9195[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.9e-26 1.7e-22 80.7 0.0 2 70 450 519 449 526 0.95
2 3 4.2e-32 3.7e-28 98.9 0.1 2 76 882 957 881 960 0.96
3 3 5.5e-32 4.9e-28 98.5 0.1 4 76 1104 1177 1102 1180 0.96

Sequence Information

Coding Sequence
ATGGCAGTGCGCGCGCCGCTGCTGTGGCGTGGAGTGAGTGCGCTGGCGTCGATCGAGCCATTGATCCCCCCATTGGAATCAATTGCGCCATGTGAGCGTTCGATCAAGGCGCGCGCGTTCGGCCGCCCACTGCCGGGTGGCAGCACGCCTCGGCTCACATCGAATGTATGCAATCAACTAAAGCACGAGCCAAGTGAAGCGACACTCTCGCTGAAAGGATCTTCATCACCATCCTCACTTCCCTCTACACTCGAATCTTTTCCTTCTGTTCTCAACAGTCCGTCTAGTGTCGAGGAGAACATGATGGACAAGCAATCAAGGCCACCCTCAGTGTCCTCCGAAGTAGATGATCTCGACTCGACCACTTCGACTAAGTCTAGGCACGCTTCGGAGGCGCAGTCCGAGCCAGATGCGGTCGAAAGCACACGAAACGACTTCAAAGATGAGGTAACGCTGCAAGTCCGCGCGCGCCATGgtccatctctttctcacccGCTCCTTTCGTTCGTCCTGCAGCCTAAACTGGACGATATCAAGCGACTTGAGTCAATCATCCAGTCTCTACGCGACACTACCGCCGCACAGATATCTCAACTACGCGATATGGTGACTCAAaaggataaaataatttctgatCTCACCGACAAGCTAGAACAACAGCGCGACTATGAGGAGATAAAGCGCGAGCTATGTATCTTCCGAAGTGAGCTAAGCCACTTTCCACCGGTGATCTCTAGCCTCGAACAAGGATCCGACTCGAAGGCCTTTCAGTCATATTTGCTCGAAAAGTCAAAAACATTTCCACACGAGCCTCTTAAACTAGAAAGCGAGGCAGCCGGAGCACCGGGTCAGTCCCTGGCTGCAGTTCAGCGTAATGCATTTTTCAACCCCTTTTCATTGCCTCAATTGCAAAGTTTGGGCAATGTTGAGTCTTTCGGAACCATGCTGGGCGAAGAGCTCGTCAGCTCTTATGCAAAAGCATTAGCTAAGCGTGATCCATCTATATTTGCAATGGCCGCAGCTGCGGCAGCATCCAGCACCAATGGTAGCAAATTGAATGCGACCAACAATCAGAACAACGGCAATTTGACAGACTCGCTGTCGCCATCACATGGCTCAAACGGAGAGGAGGCAGTGGAAGACAAGTCGGGCGGAAGTGCTTCGACAACCCCAACAAGTGCAATGATCTGCCCAGAGGGCGCGGACCCGGTCAACCACAGTCCCCTGGGTGCAACTACCGTCTCCGATCTCGGTCTTAGCAGCTTTTCCCCTTCGCCTCAAAATACCACAACTGCCTCTTATGACAAGTTGCAACAACAACTTCGCTACAATGTTGAGAAGTACATGAACGAAAATCTCAACACCCTGCAGATCTCACGTTACGTGCGCGAACTACTTTCGGTGCACAACATCGGCCAACGTCTTTTCGCCAAGTACGTGTTGGGCCTATCGCAGGGCACTGTCAGCGAACTGCTCTCCAAGCCTAAGCCATGGGATAAGCTTACCGAAAAGGGTCGCGATTCGTATCGCAAAATGCATGCTTGGTCCAGTGACGAGCGGTGCATTCATCTCCTCAAATCATTGGTACCACGCAAAGGAAAGGATACTAGTACATATAAGCAAGAAGACCCTGTCTCCGAAGAGAGAATTGTGCAAATCTTGAACGAAGCGCAACGTTCGATGCATTCTAAAGGCATCAGTCGAACAGATTTCTTTACAACTCCATTCCTCAATGGTGAACATCTGCAATCAAGGATAGAGAGGGATTTGAAGGCTAGTTCGACCATAGAAAACGCTAGTGATAATGGAAGTGATCCAGACGAAAATAAGTCTGACCTAGCTGGAAACGAGCGCAAGTCACCTGGTTCGGCGCTCAACGCAACAGCAATGGCCACCATCAACAACTTTTACCGCAATATAAACGAGTCTTTTCCTGGAGACTCCCGCAATCGCTTGGTTCGTCCCAAGTTTGGCGGACAAGAGAGCGACGAGGCAAATCAATCCGATATGATGCGAATATACCAAGATCACATCACCAAAATGATCGGCCAGCAGTTGGAGGAAGGCCTTCGTAATACTCACAATTACGAAGACATTCGCAATGTGATGGCACTTCAGCAAGAGTTGTTGCGAGCCAACCCTTTTGCAGTACAAGCAAATCCTGAATTGTTAGCACGACTTTTCTCTTCTGGTCTCATCAACGGTGCTGGCTACCTGGGCAATCTTCCACTGGGAATGGATCTACCGCAAGCTAACCAGATGGACAGCCTCCGCAAAGTTGCCCAGTCCGATACTCAACTAGGAAAAGAGGTTCGAGAGTTAAACTCATCTGCCAGCGAACCTCGACTCAAGATCGACAATCTACTGAGCCAACTCAAGTCAGGAGGCTCGCTGTCTCCCTCGCGTAATGGCACTCCACCAGCTCCAGTGGTTTCGGTCAGTGCCTCCATGCCCGGTGCTCCTGGAGTGGCCTTCAGCAACGCAAGTGAGACACCGGACGACCTCGTCGCTTCACCTCTACAGCGAATGCAGTCAATCACCAACTCGCTGCTTTCGCAATCTTCACTCCCATCGCTGCCTAGTCAGCCGTCGCGACCGGCTAAAGCGGTACTCCCACCCATCACCCAGCAACAGTTTGACCAGTACAACAATCTCAACACGGAGGAGATAGTTAAGCGTGTCAAAGAGCAACTCAGTCAATACTCCATCAGTCAACGACTTTTCGGTGAAAGCGTTCTCGGCTTATCACAAGGTTCGGTATCCGATTTGCTGGCTCGTCCCAAGCCATGGCATATGTTGACCCAGAAAGGTCGAGAGCCCTTTATTCGAATGAAGATGTTTCTTGAAGATGAGAATGCAATACACAAACTGGTGGCTAGCCAGTATAAGATTGCACCCGAAAAATTGATGCGAACGGGAAGTTTTGTATCGGGCACTGGCATATCAAGCATTGCAATGGCACCTACCGTGCCACCGCAAATATCAACTCCTCCAAGCAATCTCAGTTTGAACTCGCTCAATTCTCCAGTCTGCAACAAGAATGTTAATACGCACCTTAAATTGACCAACGAAAATGTCTACAAGTATGAGCAGTCAATGAGTCCAAGCAGTGTAGACAATGGCACTCGTTCCAACACCTCAAGTCCAGAGTTGAATGTATCCAACCCGAGCTCTGTACCATCGCCCCTATCGAGTCGTTCACGTATCGGTGGCTATAGCAGTATCAATAACAATCTTTTGCGCCCAGCACTGAACCAAACAAGCGCCTACATGCAACCGTCGGTTTACGAATTGGCTGCACTAACCTCAGACCTTGATACGCAAACTATCACTACCCGCATCAAAGAGACTTTGATGGCGCATAACATCGGACAAAAGATTTTTGGCGAAGTGGTACTTGGTCTGTCACAAGGTTCGGTTAGCGAGTTGCTCTCCAAGCCCAAACCATGGCATATGTTAAGCATCAAAGGACGTGAACCGTTCATTCGTATGCAACTTTGGCTCAACGACCCAAACAACATTGAGAAGTTACAAACCTTGAAAAACGAGAGACGAGAGGCAAATAAGAGACGCAGAACACACATGGAGGAAACGTTACCCGGAATGAAATCTTTCGATAATCAGCTTTTCAACTTCTCAGGCAACTTTAATCTAGGCAACTCGTTGAACAAGGGATTGCTCGGATCTGCAGGAGCATTCGTGGGCTCGACCACTGGAACACAACAGCCAGTGGTGAAGAAAGCTCGCATTCTCTTCACTGAAGAGCAGAAAGAAGCGTTGCGAATAGCTTTTTCCATGGACCCATACCCGAGCTCCTCTACCGCCGAGTTCTTGGCCAAGGAGTTAAACCTCTCGATTCGCACAATCACCAACTGGTTTCACAACCATCGAATGCGACTCAAGCAGACGAGTGCCGCTACAGGCGAGGACAATCAGACCAATTTGCCTTACAATATTGGTCGTGATAATGTCTCGTTCGATCAGAATAAATTTCGGTCGTTGCTTTCGCAGCGTATCTCCGAGCTGAAGCTGCGTTCCAACAATCTACCGCACTCGAACAATTCGAGCAGTGGTAGCACGAGCAGCCATAACGACAATTCCAACCCTTCATACGGACATTCATTTAGCCAGAGCTCTGCCTCCTCTCCACCACACTTCCAGCAGCGATTGAAATACTCGCCCTCCATGTTTCACTCGCAAGGAATTTACTCGAATAACACAAATAGTTGTTCATCTCCCGGATCAAGTTCACCATTCCAAGAAGACGAAGAAATGGGTACTCTTGACTTGAGTATGTCTAGTCATAATCAACACCGGTTGGAAGATAAGCTCGACAGCATAGGACGGAGCTCGGTCCAAGACGACTCTGACGACGGATGTCGTACTGGAGAAGACGACGAGGAGGAAGAGCAGGTCAACTCAGACGATGAAGGCTGCCGCGAGGAAGTCCCTAGCAAACCTTTTCGCACTGGTAGCAGTAGACGCAAGCCACAGCATGTGATGAGCTCGAGTTCAAGACGCAAAGCTGCTCAGCCTCAACAATGGGTGGCCCCGCTTGACACATCCAACTACGATTTTGCCGAGGACGAGTTTGACGGTGACATTGGTGATCGCCTGGCAGATGACATCAATGGTTCGCATGACAAAAGAAGCCTCGAAGGAGAGGAATTGGATGATCAGAAAACCGACGAGGAGATGGAAGCAGTGGATGAGACGTGCGGTGTGGAGAGTGACTCAGAGCGCGCTAGTCCTCCGCCTTACAAAAAGCTTAAGTCGACGGCTTCTGTGATGTCCAAGCTAGCAATCAACGAGGACAGCTCGAGCATGATGCAGGAGTGTGTCCAGTAA
Protein Sequence
MAVRAPLLWRGVSALASIEPLIPPLESIAPCERSIKARAFGRPLPGGSTPRLTSNVCNQLKHEPSEATLSLKGSSSPSSLPSTLESFPSVLNSPSSVEENMMDKQSRPPSVSSEVDDLDSTTSTKSRHASEAQSEPDAVESTRNDFKDEVTLQVRARHGPSLSHPLLSFVLQPKLDDIKRLESIIQSLRDTTAAQISQLRDMVTQKDKIISDLTDKLEQQRDYEEIKRELCIFRSELSHFPPVISSLEQGSDSKAFQSYLLEKSKTFPHEPLKLESEAAGAPGQSLAAVQRNAFFNPFSLPQLQSLGNVESFGTMLGEELVSSYAKALAKRDPSIFAMAAAAAASSTNGSKLNATNNQNNGNLTDSLSPSHGSNGEEAVEDKSGGSASTTPTSAMICPEGADPVNHSPLGATTVSDLGLSSFSPSPQNTTTASYDKLQQQLRYNVEKYMNENLNTLQISRYVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWSSDERCIHLLKSLVPRKGKDTSTYKQEDPVSEERIVQILNEAQRSMHSKGISRTDFFTTPFLNGEHLQSRIERDLKASSTIENASDNGSDPDENKSDLAGNERKSPGSALNATAMATINNFYRNINESFPGDSRNRLVRPKFGGQESDEANQSDMMRIYQDHITKMIGQQLEEGLRNTHNYEDIRNVMALQQELLRANPFAVQANPELLARLFSSGLINGAGYLGNLPLGMDLPQANQMDSLRKVAQSDTQLGKEVRELNSSASEPRLKIDNLLSQLKSGGSLSPSRNGTPPAPVVSVSASMPGAPGVAFSNASETPDDLVASPLQRMQSITNSLLSQSSLPSLPSQPSRPAKAVLPPITQQQFDQYNNLNTEEIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAIHKLVASQYKIAPEKLMRTGSFVSGTGISSIAMAPTVPPQISTPPSNLSLNSLNSPVCNKNVNTHLKLTNENVYKYEQSMSPSSVDNGTRSNTSSPELNVSNPSSVPSPLSSRSRIGGYSSINNNLLRPALNQTSAYMQPSVYELAALTSDLDTQTITTRIKETLMAHNIGQKIFGEVVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDPNNIEKLQTLKNERREANKRRRTHMEETLPGMKSFDNQLFNFSGNFNLGNSLNKGLLGSAGAFVGSTTGTQQPVVKKARILFTEEQKEALRIAFSMDPYPSSSTAEFLAKELNLSIRTITNWFHNHRMRLKQTSAATGEDNQTNLPYNIGRDNVSFDQNKFRSLLSQRISELKLRSNNLPHSNNSSSGSTSSHNDNSNPSYGHSFSQSSASSPPHFQQRLKYSPSMFHSQGIYSNNTNSCSSPGSSSPFQEDEEMGTLDLSMSSHNQHRLEDKLDSIGRSSVQDDSDDGCRTGEDDEEEEQVNSDDEGCREEVPSKPFRTGSSRRKPQHVMSSSSRRKAAQPQQWVAPLDTSNYDFAEDEFDGDIGDRLADDINGSHDKRSLEGEELDDQKTDEEMEAVDETCGVESDSERASPPPYKKLKSTASVMSKLAINEDSSSMMQECVQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01146060;
90% Identity
iTF_01146060;
80% Identity
iTF_01146060;