Pphe013983.1
Basic Information
- Insect
- Papilio phestus
- Gene Symbol
- jarid2b_1
- Assembly
- GCA_018231625.1
- Location
- DVQH01004939.1:1-6993[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4e-21 1.5e-17 65.2 0.0 7 89 105 184 100 184 0.92
Sequence Information
- Coding Sequence
- AATCCTAGCGTGAATAGGTCAGACCTGCAACTATCGGCCCAAAGTCGCCCGAGTATGCAAAGGAGTGCGAGAGTATTTACTGGAACACAAAGTTATGCACCCACCTTCTATCCAACAGAAGAGGAGTTTGatgatCCTATATCGTATTTTAGTCGCATACTTCCAAGTGCTGCTAGATATGGGTTGTGTAAAGTTGTGGCTCCgaacaattttaaaccaaaatgtataataaatgaGGACCATCGTTTTGGAGTGTCAAACCAATACATATATCAGCTATACAACCGTTGGGGACCAGCCGCTAGAGAACTATGTGCCATTAAAGCTCATTTAGCTTCCCAAGGTGTGGTATTTACTCGCCCACCATTGCTTGATGGGGTTGAGGTCAACTTAGCGCAGTTATATAACTTGGTACAAGCTATGGGAGGCCTGAAAGAAGTTATCGAAAATAAGCGATGGACAAAAATCgctgaaaaaatgaaatttaacaaaacgCCAAAAATTGAAGACAAATTGGATCAagtatatgtaaaatatatattgccTTACGATACAATGAGATCGTTTGAGCGGAATGCTCTTATGCAAAAGGTTGATCAATACTGGTGCCTAAAGCACGAGAAAATGCTAGAACGTGCTAGGAGGCCATTACCAAGTAGGGTAGATCCTGTCGCTCAAAGTGACCCAGTTGCAGATatacgatttaaaaatgtttatgtaggCGGAGCTCTGACTGACATGGAGGACTGTATCTGCAGTGGTCGCCAAATGAAtatacttacttttaaaaagGTGGCAAACCGGTGCAAAGAAATGTATGTGCCCGGCGGCAAGGATAAAACTCTCAATGAGATTGAACAAATATATTGGGAAAAGGTTCTTGATGCACAAGAACATATTTGTATCAATAACGCATCAATTGACACGGGTGAAGGAGGGCATGGTTTCACAAAAGACCAACGTGACTCCTATGGGAAACATCCATGGAATTTGAAGACGCTTACTCAGAACAGTTCGAATATGCTTAAATTCATGGGACCTGTACTGGGGGCAACAGTACCCACACTGCATCTCGGAATGATATTCTCTACGAACTGCTGGCACAGGGATCCACACAACTTGCCGTGGATAGAATACATGCACAGTGGACCTGGCAAAATTTGGTATGGCATTCCAAATGAACAAAGTGACAATTTCCGAAGAGCCGTAGAATTGCTGTGTCCAACGTCATGTCAAAACAAACCGATTTGGCTTCCATCAGATGTGACAATGATTCCACCGGACCTGCTGTTGGAGAATAATGTCTCCATGTCCCGAGTGGTGCAAGAGCCGGGTCAATTTATTATCGTTTTTCCAAGGGCATATTCAAGTTCCATTTCAACTGGTTTCACTATAACTGAGAGTGCATATTTTGCCGATTTTCCTTGGTTGCAAACAATTGAGCAAATTTTCAATGAAGTACGAAATAATTGCGAGCCTACAATGTTCTCGTTGGACCATCTGCTAATTTCGGCGGCGCGTGACCCGAACGCGCCCGTTCCGGTGCACCGGCTGGTGAATCTCTACCTCCGAAAAATCATAAGAGAAGAGCTAAAAAACCGCAGCGCCATTGCCGCCTACAAAATACCGattcaaaaaaatcaaaggaAGCGTACCCGCAGGCGGCCCGCTGGCGCGTGGAATATTAGAGATCAAGACGAGTGTGAATTCTGCCGATTTACCTTGTTTCTCTCTAAAGTGCGAGGATTGAGAGAGGAGCAGCGGTCAATGTGCCTCAAACACGCCCTACAGTTACTCGACACAATAAAGCACGAGAATCGTGATTTATCCGGCGTAGAACTAGAAATAAACCTCTCTGATGCAGAATTAAAAGATTTGATATCGAATATGGATTGA
- Protein Sequence
- NPSVNRSDLQLSAQSRPSMQRSARVFTGTQSYAPTFYPTEEEFDDPISYFSRILPSAARYGLCKVVAPNNFKPKCIINEDHRFGVSNQYIYQLYNRWGPAARELCAIKAHLASQGVVFTRPPLLDGVEVNLAQLYNLVQAMGGLKEVIENKRWTKIAEKMKFNKTPKIEDKLDQVYVKYILPYDTMRSFERNALMQKVDQYWCLKHEKMLERARRPLPSRVDPVAQSDPVADIRFKNVYVGGALTDMEDCICSGRQMNILTFKKVANRCKEMYVPGGKDKTLNEIEQIYWEKVLDAQEHICINNASIDTGEGGHGFTKDQRDSYGKHPWNLKTLTQNSSNMLKFMGPVLGATVPTLHLGMIFSTNCWHRDPHNLPWIEYMHSGPGKIWYGIPNEQSDNFRRAVELLCPTSCQNKPIWLPSDVTMIPPDLLLENNVSMSRVVQEPGQFIIVFPRAYSSSISTGFTITESAYFADFPWLQTIEQIFNEVRNNCEPTMFSLDHLLISAARDPNAPVPVHRLVNLYLRKIIREELKNRSAIAAYKIPIQKNQRKRTRRRPAGAWNIRDQDECEFCRFTLFLSKVRGLREEQRSMCLKHALQLLDTIKHENRDLSGVELEINLSDAELKDLISNMD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -