Pphe005392.1
Basic Information
- Insect
- Papilio phestus
- Gene Symbol
- retn
- Assembly
- GCA_018231625.1
- Location
- DVQH01000457.1:10336-20761[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.4 1.7e+04 -2.2 0.0 25 50 178 203 160 221 0.70 2 2 6.7e-27 2.5e-23 83.8 0.0 2 89 265 350 264 350 0.96
Sequence Information
- Coding Sequence
- ATGTTTCATCACACACGGTTTCATTTTATACTTGGTGAAGCGATTGGCGGGTGTGATTGGTTGTCCGACCCGGAGGTGCAACCGCGTGGTCCACGAGGGCGCTGCTGTGCTGATCTGCTGGCACAATCCACTCAGCAACTCGAGATGATACGCATTGCCTCACCCGCCCTAGCCGTCGTCTGGTCTCTCCAGCCCGACATCAGCAACCAGGAGGACGATGAGGACTTACATGAGTCGGACTACAACTCGGAAGAAGAGGTTGGCATTCGCAATGGGTCTCGCCGCTCTCGCAGTGCACCAAACGGCAATACGAATGCTCTCAACATGCTGAACCAACTCAATCTGGAAGCGATCAATCGAATCAAGCCAGATGAGTTGACGGAACAAGCTAGCGAGGTGCTTGCCCGGCTTAAGCAACAGCAACAGGATTACGCCGAGAGCGAAGAGATGGACGAAGACTTGAAGTCCGATGAGCGGACCCAGCTGATGTTAGCCATGCAGAGGCATGCCGCTGCTCAAATGGCGGCTGCAGCGCTCGGTCAGAATGCGGCACATTTCGCCAATCTGGCCGCTTCGGTCGGAAGTCTCGGTGGATTGCAGCTCACTTCGAACGCCATGTGTCAACTAAACTCTGCACTATTAATGGGATCGAACTCGTCGCCAAGTGGCAACTCCGGATCTTCAAACTCCGGGCCGGCTTCATCCCCAGCACTGCAGAGCATTGAGCCTGGAAAGGGCTACACTTACGAGGAGCAGTTCAAACAGCTTTACGAAATTAATGATGACCCCAAAAGGAAGCCATTTCTGGACGATCTCTTCAGTTTCATGCAGAAAAGAGGGACTCCAATTAATCGCATTCCGATAATGGCAAAACAAGTACTTGATTTATATGAACTATATCAACTCGTGGTGGCACGTGGTGGTTTAGTCGAAgtgattaataaaaagatatggCGAGAAATCACCAAAGGTCTTAATCTACCTTCCTCAATCACGAGTGCGGCTTTTACTTTGAGAACACAATACATGAAATACTTGTACCCATACGAATGTGAAAAGGAAAAGCTAAGTTCTCCTGAAGAGCTACAGATGGCGATTGACGGAAATCGTCGCGAGGGACGCAGATCGAGTTATGGGCAATACCCGGAACTAACTTCATCACCACCACCCTCATTGCTTTCTCGCAATCATCTTTTTACTGCTAACAATAACGGTATCCATGGTTCCCCGCTTAGTTTGGTCTCGCGACAAGTCAATGGTCACAGTTCTCAAGGTCACTCTTCGGGCGAGGAAGATAATGGCAGCATTTCCTCGAATCCATCATACTCTCATCAATTTCACCAGAATCAAAACGAGGCCTTGAATCTAGAGATAAACCCTAAATCGAGCGAGACGAGTAGAAACTCACAGGATCGCAAGTCTCAGCTTGACGAAATGCTGGGCGTGACACCCGCCAAGCGGTTTCTCAGCGAAGAGAACTACCTGATGAATGCTGCGTTTCCAAGCACTCATTTGAAAATTTCCAGCAAAGATGGACGCCCACTCGATGGTCAGCTCACTGTGAGCATGGAGATCAACGGTATTCTGTACCATGGAATCTTGTTTGCGCAGACCAATCGCAACAAAGTACCTTAG
- Protein Sequence
- MFHHTRFHFILGEAIGGCDWLSDPEVQPRGPRGRCCADLLAQSTQQLEMIRIASPALAVVWSLQPDISNQEDDEDLHESDYNSEEEVGIRNGSRRSRSAPNGNTNALNMLNQLNLEAINRIKPDELTEQASEVLARLKQQQQDYAESEEMDEDLKSDERTQLMLAMQRHAAAQMAAAALGQNAAHFANLAASVGSLGGLQLTSNAMCQLNSALLMGSNSSPSGNSGSSNSGPASSPALQSIEPGKGYTYEEQFKQLYEINDDPKRKPFLDDLFSFMQKRGTPINRIPIMAKQVLDLYELYQLVVARGGLVEVINKKIWREITKGLNLPSSITSAAFTLRTQYMKYLYPYECEKEKLSSPEELQMAIDGNRREGRRSSYGQYPELTSSPPPSLLSRNHLFTANNNGIHGSPLSLVSRQVNGHSSQGHSSGEEDNGSISSNPSYSHQFHQNQNEALNLEINPKSSETSRNSQDRKSQLDEMLGVTPAKRFLSEENYLMNAAFPSTHLKISSKDGRPLDGQLTVSMEINGILYHGILFAQTNRNKVP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -