Basic Information

Insect: Papilio memnon
Gene Symbol: stc
Assembly: GCA_003118335.3
Location: JAOPJP010000002.1:6603711-6618268[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 2.3e+04 -4.3 1.6 15 19 469 473 468 473 0.81

2 13 0.12 1.4e+03 -0.2 0.8 4 10 503 509 501 509 0.91

3 13 3.6e-05 0.41 11.1 18.1 4 19 517 532 515 532 0.93

4 13 4.2e-07 0.0048 17.2 16.5 1 19 568 586 568 586 0.98

5 13 7.6e-06 0.086 13.2 12.2 1 19 627 645 627 645 0.99

6 13 0.00012 1.4 9.4 4.5 1 14 686 703 686 703 0.83

7 13 0.015 1.7e+02 2.7 7.3 1 11 737 747 737 748 0.93

8 13 0.041 4.7e+02 1.3 0.3 4 10 752 758 751 759 0.93

9 13 3.6e-06 0.041 14.2 14.0 3 19 766 782 764 782 0.92

10 13 0.00035 4 7.9 9.0 9 18 828 837 826 838 0.92

11 13 1.6e-08 0.00018 21.7 12.7 1 16 874 889 874 897 0.90

12 13 0.003 35 4.9 9.7 1 18 904 926 904 927 0.80

13 13 0.46 5.2e+03 -2.1 0.2 8 12 943 947 942 947 0.81

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	2.3e+04	-4.3	1.6	15	19	469	473	468	473	0.81
2	13	0.12	1.4e+03	-0.2	0.8	4	10	503	509	501	509	0.91
3	13	3.6e-05	0.41	11.1	18.1	4	19	517	532	515	532	0.93
4	13	4.2e-07	0.0048	17.2	16.5	1	19	568	586	568	586	0.98
5	13	7.6e-06	0.086	13.2	12.2	1	19	627	645	627	645	0.99
6	13	0.00012	1.4	9.4	4.5	1	14	686	703	686	703	0.83
7	13	0.015	1.7e+02	2.7	7.3	1	11	737	747	737	748	0.93
8	13	0.041	4.7e+02	1.3	0.3	4	10	752	758	751	759	0.93
9	13	3.6e-06	0.041	14.2	14.0	3	19	766	782	764	782	0.92
10	13	0.00035	4	7.9	9.0	9	18	828	837	826	838	0.92
11	13	1.6e-08	0.00018	21.7	12.7	1	16	874	889	874	897	0.90
12	13	0.003	35	4.9	9.7	1	18	904	926	904	927	0.80
13	13	0.46	5.2e+03	-2.1	0.2	8	12	943	947	942	947	0.81

Sequence Information

Coding Sequence: ATGTCTCAGTGGAATAATTCTTATGGCTATAACAATCAATTCCAAGTGCCACCTAATTCTTGGAATGGAGATATAAATGGGCAATATGTAAATCAACCATACTATGATAACAGACAATATGAATCAAGCAACCAATATGTAAGTTTTGATGAATTTTTAACACAAATGCAGGGTAATGGTGTTCCACAAAATAATGCTTCTAACTATAATAATGTACAGTACCAAGCTTACCCAACTAATCAATACAATTATCAGAATGTACCATCACAAAATCCACAGATGGAATTCAATTATGGACACCAGAACCCTACTGCAAGTAATACTTTAGATACTTATTCAACCAATATTCAAAATCAATACAATCAATCTGTACCAGAGTCAAGAACTTTTTCAAATGAAGTTGTTATGAATTCAAAGTTGACTCCAACTGCAACAGAATTTATACCAAAATGTTCCATAAATGTAGCCTCTACTTCCCAAAACACTTCTCAAGAAACTTCAGCTACACATACTGATGAACCAGATAACAGAACTAGTACCACTAAATCATCAGAAAGCAATTGGCGAGAAAGACCAAGCAACAATGAAACAGTTAAGTCGCAAGTTGATGTGAACAATTTTAGTCGATATCAAAAAAATTATAAAAACACAGAAGGAAATCGTAATCGTGATACAAATAATAGATATGAAAAACGTAATAATGAATCAAAACATGAATCAAATGGACGCTATCGTAATGAACATAGTAATAATTATCAATCAAATCAACAAAATAAAGAATTATCAATACAAAAAAAAGATTCAGAAAACTCTGCTAATGAAACTTATAATCAACACGAAAATCAGCGAAACTCTGAAACTGGAAATAGAAACGAAACAAGAAGATATGCAAATGAAAATAATCAATCAAAATCAAATTCTAAATCAAAAAATAAAGATTCAGACGCAGGTCGAACTTTCTATAACAGCTCTATAAATAAAAATAGCCAAGATGTTAGGAATGGAAGAGGAGAAAGTTCTGGAAGAAATCGAAACTGGATTGGCAGTCAACGTGTTCGGACTGCGGAACGTAATAATGTTGAAGACGAACAATATGCTAATACTTATATGCATTATAAAGATGACAGAGCAGAACGAGTTGCAAATAATAATAAACATGAAAAAACCGCTAGTCCAGTAAAAGGAAGAAACAAACCGACTAATGACTCAGGAGGCAATACAGCAATGACCCAACGTGAGCGTCTCACTGAACAATTAGACAAGGGTACTTTGGAATGTCTGGTGTGCTGTGAACGAGTCAAACAGACAGATTCTGTTTGGTGGTGCTCAAATTGTTACCATGTTTTACATCTTAGGTGTATAAGAAAATGGGCCATGAGCAGTCTAGTTGAAGGAAAATGGAGATGTCCGGCATGTCAAAACACCAATGAAGATATCCCAACGGAGTACCGTTGTATGTGCGGTGCTGTCAAATCACCAGAGTACTCCCGAGGCTCGGTCAGCGCTCACACTTGTGGCAAATCGTGTCGTCGGCCGAGGAACTGTCCCCATCCCTGCACTTTGCTCTGCCATCCCGGCCCATGTCCACCATGCCAGGCTACTGTCAACAAGCAATGTGGTTGTGGTGCGGAGACCCGGTCGGTGTTGTGCAGCAGCAAGCTGGCGCAGCTGTGCGGGCGCGAGTGCCGTCGCAAGCTGCCCTGCGGCGTGCACCACTGCCAGCGCGAGTGCCACGAGGGTCCTTGCGATGAATGCTCAGAGATTGTCACACAAGTGTGTTACTGCCCCGCGGCAAAGACACGGTCTGTGCCGTGCACGTCAGACACTAGCGAGTGTCGCGCGTGGTCGTGCGGCGCGGAGTGCGCGCGCGTGCTGTCGTGCGGCGCGCACGTCTGCCGGCGCGTGTGTCACGCCCCGCCCTGCGCGCCCTGCCCCCTGCGCCCCGACAACGTGCACTCCTGCCCCTGCGGCAACACTAAAATTGAAAAAGATGAACGGAAGTCCTGCACCGATCCAATTCCTTTATGCGGTAACATCTGTGCGAAGCCTTTATCGTGTGGTCCGGAAGGAGATAAACATTTTTGCAAACAATTGTGTCATGAAGgagacaaggttcctgtgaaatgtaatttaattagtgtagtgggaaacaataaagcatttattaattatttatttcttGTTGCTTGTTATGTACAGAAGTTGTCTTGCGGTCGTCACCGCTGCCGCACGGCGTGCTGCGCGGCCCAGTCGCACCGCTGCGCAGTGGTGTGCGGCCGCACGCTGTCCTGCCAGCTGCACCGCTGCGAGGAGTTCTGTCATACGGGCCATTGTGCGCCCTGCCCTCGCGTCAGTTTCGAAGAGCTGCACTGCGAGTGCGGCGCCGAAGTGCTGCTGCCGCCGATCCGCTGCGGCACTCGTCCGCCGGTGTGCCGCGCGGCATGCGTGCGCGCGCGCCCCTGCCGCCATCCGCCACACCACGCCTGCCACACCGGCGACTGCCCGCCCTGCGTCGTGCTCACCACCAAGATGTGCCACGGACAACACGAGGAACGGAAGACAATACCGTGCAGCCAGGAGGAGTTCTCGTGCGGTCTGCCGTGCGGCAAGCCGCTGCCCTGCGGCAAGCACACCTGCACAAAGACCTGCCACAAGGGACCCTGCGATACTGACAAATGTAAGCAGGCGTGCACGGAGAAGCGCGCGAGCTGCGGACACGCGTGCGCGGCTCCGTGCCACGTGGACAACGGCGGCGTGTGCCCCAGCGCCGCGCCCTGCCGCCGCCTCGTGCGCGCCACATGCGCCTGCGCACGCCGCTCCGCAGACAGACCCTGCCACGAGAACGCCAGGGACTACGCCAAAATTATGAGCGCGTTGGCCGCAACTAAAATGCAAGAAGGAGGTTCCGTGGATCTATCTGAGGTGCATCGACCTGGAGCTATGCTGAAAACGTTGGAGTGCGACGACGAGTGCCGTATGGAGGCGCGCAGCCGACAGCTGGCGCTGGCGCTGCAGATCCGCAACCCGGACGTGTCCGCGAAGCTGGCGCCGCGCTACAGCGAACACGTGCGTGCCACCGCCGTGCGCGAGCCTGCCTTCGCGCAGAACGTACACGACTCTCTCACTGAGCTCGTGCAACGCGCCAAGAAGTCAAAGCAGAAGACGCGCGCGCACTCGTTCCCGTCAATGAACCGTCAGAAGCGCCAGTTCATCCACGAGCTGTGCGAGCACTTCGGCTGCGAGAGCGTCGCGTACGACGCGGAGCCCAACCGCAACGTCGTCGCCACAGCCGACAGGGAGAAGTCGTGGTTGCCAGCGATGAGTGTGCTGGAGGTGCTGGCGCGCGAGGCGGGCAAGCGGCGCGTGCCGGGGCCCGTGCTGCGCGCACCCGCTGCGCCCACGCCCACGCATGCCGCACACGCCGCCCACGCAGCACACGCCACGCCTACTACATCCGCCAGCAGGAGTAGTGGTTGGGCAACACTGACGTCGAGCAACGCGTGGGCAGCTCGCAGCCAGCCGCCGCGCCCCGACAAGATTGATTACTTCGACAACCCGCCTGAAAACTAA
Protein Sequence: MSQWNNSYGYNNQFQVPPNSWNGDINGQYVNQPYYDNRQYESSNQYVSFDEFLTQMQGNGVPQNNASNYNNVQYQAYPTNQYNYQNVPSQNPQMEFNYGHQNPTASNTLDTYSTNIQNQYNQSVPESRTFSNEVVMNSKLTPTATEFIPKCSINVASTSQNTSQETSATHTDEPDNRTSTTKSSESNWRERPSNNETVKSQVDVNNFSRYQKNYKNTEGNRNRDTNNRYEKRNNESKHESNGRYRNEHSNNYQSNQQNKELSIQKKDSENSANETYNQHENQRNSETGNRNETRRYANENNQSKSNSKSKNKDSDAGRTFYNSSINKNSQDVRNGRGESSGRNRNWIGSQRVRTAERNNVEDEQYANTYMHYKDDRAERVANNNKHEKTASPVKGRNKPTNDSGGNTAMTQRERLTEQLDKGTLECLVCCERVKQTDSVWWCSNCYHVLHLRCIRKWAMSSLVEGKWRCPACQNTNEDIPTEYRCMCGAVKSPEYSRGSVSAHTCGKSCRRPRNCPHPCTLLCHPGPCPPCQATVNKQCGCGAETRSVLCSSKLAQLCGRECRRKLPCGVHHCQRECHEGPCDECSEIVTQVCYCPAAKTRSVPCTSDTSECRAWSCGAECARVLSCGAHVCRRVCHAPPCAPCPLRPDNVHSCPCGNTKIEKDERKSCTDPIPLCGNICAKPLSCGPEGDKHFCKQLCHEGDKVPVKCNLISVVGNNKAFINYLFLVACYVQKLSCGRHRCRTACCAAQSHRCAVVCGRTLSCQLHRCEEFCHTGHCAPCPRVSFEELHCECGAEVLLPPIRCGTRPPVCRAACVRARPCRHPPHHACHTGDCPPCVVLTTKMCHGQHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCTKTCHKGPCDTDKCKQACTEKRASCGHACAAPCHVDNGGVCPSAAPCRRLVRATCACARRSADRPCHENARDYAKIMSALAATKMQEGGSVDLSEVHRPGAMLKTLECDDECRMEARSRQLALALQIRNPDVSAKLAPRYSEHVRATAVREPAFAQNVHDSLTELVQRAKKSKQKTRAHSFPSMNRQKRQFIHELCEHFGCESVAYDAEPNRNVVATADREKSWLPAMSVLEVLAREAGKRRVPGPVLRAPAAPTPTHAAHAAHAAHATPTTSASRSSGWATLTSSNAWAARSQPPRPDKIDYFDNPPEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01142814;
90% Identity: -
80% Identity: -