Pmem026312.1
Basic Information
- Insect
- Papilio memnon
- Gene Symbol
- GATA-B
- Assembly
- GCA_003118335.3
- Location
- JAOPJP010000023.1:79406-81481[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.2e-18 2e-14 53.2 3.9 1 34 77 109 77 111 0.97 2 2 2.5e-19 9.5e-16 57.4 4.9 1 34 197 229 197 231 0.98
Sequence Information
- Coding Sequence
- ATGTGCTTGCGGTGGCGCTGCGAGTGCGGACTCGTCGCTCGCCGCTCGCCGCTCGCCATACAACGCACGCTGCACGCCGACATGCTCGCAAACCATCGTTTAGCGCTGCCGGGGTTCGAGATGACATGCGGAGTATCAGCCGCGCGGTCGGCGGTCGGGGCCGGCGCTCACGCGGCGGTGGTGTCTTGCGCAGTCGAGATGGCGGAGTTTTTCACGGTCGGGCGCGAGTGCGTCAACTGCGGCGCCATCCACACGCCGCTGTGGCGCCGCGACGGCACCGGCCACTACCTCTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGTCCGCTGAAGCAGCCCCGGCGGCTGGTACGTCAGCGGCACGCGGCCGCCCCGCCCGCGCCCGACGTACGCAGCACACTGGCCGCGGAGGGGGCCCCGCCGGGCGCGGATCTCTACAAGGGCTTCCTCCTCCAGGGCTATAGCGGCGTGGCGCCGCTCGCGCTGCCGCCCGCGTCCGCCGCGCCGCTCGCCGCCTCTACCCCCCCCGACTACAAACAGAAGAAAGGGATGGGTAGCAAGCGGCCCGGGCTCACCTGCAGCAACTGCGGCACCTCCACTACGTCGCTGTGGCGGCGCAACGTGCACGGCGAGACTGTGTGCAACGCATGCGGCCTCTACTACAAGCTGCACGGCATCAACCGCCCGCTCGCCATGAAGAAGGACTCTATACAGACGAGGAAGCGAAAACCAAAGAATTCTATGAAGGGAGAAAGGAATCTCAGTAAAAGCAATTCGCACGGCACGCACAGCACGCTCGGCACACATGGCGCGCACGGCGCACACGCCTCGCACGGCACGCATGGCACGCACGGCGCGCACACGCCGCACACCGCCGCATCCAATACAGTGCAATCTACTGTCAAGCTAGAAAACATGTTGGAGAGTGGGCCGGGTGTGATCAGCGTGGCCAACGCGGAGAGCCGCGCGGCGCTGGCGCTCGGCTACTACGTGCAACACGCCATCAAGATGGACGAGCCGCCGCCCGCGCACGCGCACGCCCTCTCCGCGCACCCCGCGCACTCCGCGCACGCCGCGCACGCCGCCCACGTTGCCCACGCCGCACACATGTACGAGGAGGAGTACCGGCGAGCCGAGAGCGGCGAGCGCAGCGCCACCGTCTCGCTGGCCAGCTGA
- Protein Sequence
- MCLRWRCECGLVARRSPLAIQRTLHADMLANHRLALPGFEMTCGVSAARSAVGAGAHAAVVSCAVEMAEFFTVGRECVNCGAIHTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQPRRLVRQRHAAAPPAPDVRSTLAAEGAPPGADLYKGFLLQGYSGVAPLALPPASAAPLAASTPPDYKQKKGMGSKRPGLTCSNCGTSTTSLWRRNVHGETVCNACGLYYKLHGINRPLAMKKDSIQTRKRKPKNSMKGERNLSKSNSHGTHSTLGTHGAHGAHASHGTHGTHGAHTPHTAASNTVQSTVKLENMLESGPGVISVANAESRAALALGYYVQHAIKMDEPPPAHAHALSAHPAHSAHAAHAAHVAHAAHMYEEEYRRAESGERSATVSLAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01142082; iTF_01149237; iTF_01141312;
- 90% Identity
- iTF_01149237;
- 80% Identity
- -