Pmem003349.1
Basic Information
- Insect
- Papilio memnon
- Gene Symbol
- JARID2
- Assembly
- GCA_003118335.3
- Location
- JAOPJP010031870.1:1-7520[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-18 2.1e-15 57.2 0.0 7 89 401 480 396 480 0.92 2 2 4.5 8.5e+03 -2.4 0.0 58 84 561 585 545 587 0.52
Sequence Information
- Coding Sequence
- TTCTCAGTAAATAATGCATTAGGATTGCAGCCTGTTGTTAGAATTGAATATCATGGGGACAGTCTTAAAGAGCATACAACGCCATTAGAGACACATAATATGAGCCCGCCAATAGCTGAGAATGATTTATCCGAACTATTAATTTCAAGGCGCACAGGCAACACTTCTGTTGATACAACAAATAATCAGCAAGAAGATCAAACATCTGGCCCAGAAAACCATTCCGGTACTACTTATGCATCACAAGAAGATCAAACATCTAGCCCAGAAAACCATTCCGGTACTACTTATGCATCAGTCAGTGTTGTTGATACAACAAATAATCAGCAAGAAGATCAAACATCTAGCCCAGAAAACCATTCCGGTACTACTTATGCATCAGTCAGTGTTGAAAACTGTCCGATATATTGTCCATCTAAACGCTACTCAAGTATGAACGAAATTATCTTTGCGGACATTAAAGATTTGGTGGGCCGATGCAAAACGTGTGAACATTGTGCATTCGTGGACAAAGTAATGTGTGTTATAAGTTTGTTTAAAATACAATATTGTCGTAAGATGATAAAGTCAAAAATCCTCGAATACGATGATGAGGAAGGATCAGTAATGTGTGCCTCGGGATCAGAGAACCGTCCGAGCAATGAATATACTACAGAAATCTTTTATTTGCTTTATGAAAAACATCCTGAACATGTTGTGGAAATGAAAAGAATCAAGCTCGGCAACCAGTTGATAAAAATTAAAATTTCTGTTGTCCCATGGACATTGCATATTAGAATCACGGTGATTACTGTATCTGATAGTGACCGCATTTTGGATGATATAATAAAACATGTCTTATCAAAGAAGTCACACGTCACAGTTTCTACCAGTGGAAATCAGTCTGAACTGTTCCAACCCATCCCGAGTACATCTACTTCAAACACTACATATGGCACTCAAATCAGAAGACATAGATTTATGACCACTGGGAGACAGACAGATGCACCTACCTTCTATCCTACAGAAGAAGAATTTATGGATCCTATTACGTATTTCAACAAGATTATGCCCAGTGCTGCTAGATTTGGGATATGTAAAGTGGTGGCTCCGAAAAATTTTAAACCAAAATGTTCGTTAAATGAGGATTCGCGTTTTAGAGTAACTAACCAATACATATATCGGCTGTATAAGCGTTGGGGACCAGCCGCAAGAGAATTATGTGCCATTAAAGCTCATTTAGCTTCCCAAGGTGTAATATTTACTCGCCCGCCTTTGCTTGATGGGGTTGAGGTCAACTTACCGAATTTATATTACTTGGTACAAACTCTGGGAGGTCTGACTGAAGTTATCGAAAAGAAACGCTGGATCAAAGTGGCGGAAGAGATGAATCTTGCCAAAACGCCAAAAATTGAAGACAAATTGGATCAAATATATGTAAAATATATATTGCCTTACGATACACTGAGAGCGGAGCGGGATCGGCTTATGGGAACCGTTGATGAATACTGGAGTAGAAAACAGGCAGTAATGATAAAACGTGCTACAAATCCATTACGACGTGATCCTCTTGGTCAATGTGAACCACCTGCAGAAATACAATTTCGAAATGTTTATGTGGCCGGAGCGCTGTCCGATTCGGAGGATTGTATCACCGTTGGCCGCCAAATGAATCTACATACTTTTAAAAAGGTGGCAAACAAATGCAAAGAAATGTTTATACCCAGTAGTAAGGATATAACTCACAATGATATCGAACAAATATATTGGAAAAACGTTCTTCTTAGACAAGACCACATTTGTGTCAATAACGCATCAGTTGACACGGGTGAATTAGGCCAGGGATtcacaaaagaccaacgtgactcctatggaaaacatccatggaatttgaagGTGCTTAGTCAGAACAGTGGAAACATGCTTAGATTCTTGGGACCTGTACTGGGGGTGACAGTACCCACACTGCATCTTGGGATGGTATTCTCTACCAGTTGCTGGCACAGGGATCCTCACAACTTGCCGTGGATAGAATACATGCACTCTGGACCTGGAAAAATTTGGTATGGCATTCCAAATGAACAAAGTGCCAATTTCCGAAAAGCCGTAGAATTGTTATGTCCAACATCATGCCAGAACAAATCAATTTGGCTTCCATCGGACATGACAATGATTCCACCGGACCTGCTGTTGGACAATAATGTCTCCATGTCTAGAGTGGTGCAAGAACCTGGAGAATTTATTATCGTTTTCCCAAGGGCATATTCAAGTTCTATTGCAACTGGATTCACTGTAACTGAGAGTGTATATTTTGCCACATTTTCATGGTTGCAATCAGTTGTCAGTGTGTTTGCTCACTTACGTGAGAACAACGAACCCACAATGTTCTCGCTCCAACATCTGCTGGTTTCGGCTGCGCGTGACACGCGGGCGCCCACCTCGGTGCAACGTGTAGTGAATACCGCCCTCTTGGTAATCGTAAGGGAAGAGCTGAAAAACCGTAACGCCATTACCGCGTACAAAATACCGGTACG
- Protein Sequence
- FSVNNALGLQPVVRIEYHGDSLKEHTTPLETHNMSPPIAENDLSELLISRRTGNTSVDTTNNQQEDQTSGPENHSGTTYASQEDQTSSPENHSGTTYASVSVVDTTNNQQEDQTSSPENHSGTTYASVSVENCPIYCPSKRYSSMNEIIFADIKDLVGRCKTCEHCAFVDKVMCVISLFKIQYCRKMIKSKILEYDDEEGSVMCASGSENRPSNEYTTEIFYLLYEKHPEHVVEMKRIKLGNQLIKIKISVVPWTLHIRITVITVSDSDRILDDIIKHVLSKKSHVTVSTSGNQSELFQPIPSTSTSNTTYGTQIRRHRFMTTGRQTDAPTFYPTEEEFMDPITYFNKIMPSAARFGICKVVAPKNFKPKCSLNEDSRFRVTNQYIYRLYKRWGPAARELCAIKAHLASQGVIFTRPPLLDGVEVNLPNLYYLVQTLGGLTEVIEKKRWIKVAEEMNLAKTPKIEDKLDQIYVKYILPYDTLRAERDRLMGTVDEYWSRKQAVMIKRATNPLRRDPLGQCEPPAEIQFRNVYVAGALSDSEDCITVGRQMNLHTFKKVANKCKEMFIPSSKDITHNDIEQIYWKNVLLRQDHICVNNASVDTGELGQGFTKDQRDSYGKHPWNLKVLSQNSGNMLRFLGPVLGVTVPTLHLGMVFSTSCWHRDPHNLPWIEYMHSGPGKIWYGIPNEQSANFRKAVELLCPTSCQNKSIWLPSDMTMIPPDLLLDNNVSMSRVVQEPGEFIIVFPRAYSSSIATGFTVTESVYFATFSWLQSVVSVFAHLRENNEPTMFSLQHLLVSAARDTRAPTSVQRVVNTALLVIVREELKNRNAITAYKIPV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -