Basic Information

Insect: Papilio machaon
Gene Symbol: Znf516
Assembly: GCA_001298355.1
Location: NW:259617-268718[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 3.6 1.9e+02 2.4 0.7 3 21 497 515 495 519 0.90

2 12 0.00041 0.022 14.9 1.2 1 23 540 564 540 564 0.93

3 12 0.034 1.8 8.8 2.6 1 23 578 601 578 601 0.97

4 12 0.063 3.3 8.0 0.7 1 23 606 630 606 630 0.92

5 12 7.1 3.8e+02 1.5 0.9 2 23 651 675 650 675 0.77

6 12 0.0086 0.46 10.7 0.7 2 22 681 701 680 701 0.95

7 12 1.1e-05 0.00057 19.8 0.9 1 23 759 780 759 780 0.98

8 12 1.4e-05 0.00074 19.5 0.9 1 23 786 809 786 809 0.95

9 12 0.00067 0.036 14.2 1.2 2 23 855 878 855 878 0.96

10 12 0.82 44 4.4 4.1 1 21 885 905 885 907 0.93

11 12 0.0081 0.43 10.8 1.5 1 21 913 933 913 938 0.92

12 12 0.011 0.58 10.4 1.0 1 23 944 967 944 967 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	3.6	1.9e+02	2.4	0.7	3	21	497	515	495	519	0.90
2	12	0.00041	0.022	14.9	1.2	1	23	540	564	540	564	0.93
3	12	0.034	1.8	8.8	2.6	1	23	578	601	578	601	0.97
4	12	0.063	3.3	8.0	0.7	1	23	606	630	606	630	0.92
5	12	7.1	3.8e+02	1.5	0.9	2	23	651	675	650	675	0.77
6	12	0.0086	0.46	10.7	0.7	2	22	681	701	680	701	0.95
7	12	1.1e-05	0.00057	19.8	0.9	1	23	759	780	759	780	0.98
8	12	1.4e-05	0.00074	19.5	0.9	1	23	786	809	786	809	0.95
9	12	0.00067	0.036	14.2	1.2	2	23	855	878	855	878	0.96
10	12	0.82	44	4.4	4.1	1	21	885	905	885	907	0.93
11	12	0.0081	0.43	10.8	1.5	1	21	913	933	913	938	0.92
12	12	0.011	0.58	10.4	1.0	1	23	944	967	944	967	0.94

Sequence Information

Coding Sequence: ATGTCTCCGAAGACTTTAAAGTGTGCAATAAGTCGTCGAGAAACGAGTAATTCCTTCGATTCCTCCAAATTAATGTTCTTCACCAGTTGTCCTCGCCTCGCCTCGCCTCGCCAGATGTTGTCACCTCGGGACGACGACGATGACGACAACCATCTCTGCATCAAATGCAACGCCACTATCGTCGGTCTCGACAACTATGTCGAACATCGCAAGCAGCGATGCGGCAAAAACAAATCGGAAACAAAACCCATTTTGCCTATCAACCCCTTGGAACCCACATACAGTCTTGGCGCCGACGTCTTTTTCCAATCCTTAGAACTTCAGAGCAGTGTTAAAAAGACAACGCTGTCTCGACTCACGCCACCTACTCCCATTTCTAAGGCGAGTATAGACGTAAAGACAACTTTAACGGTGGCATCGACCTCTAGAGATTTGCCGCGAATCAGTCCCGTCGAATCAAACCTCCGAGGAGTTGACTGGATCGGTGGACATAGTTTACGAATAGGAAGTAACGAAGACAATCAAACGAAACTTATAAACGCCGTGGCCAGCATCAGTGGTAATGTCAAGAAGGACTTGCCGTCCACTTCATATAGCTTGGGAGCTTTCAATGACTTTAAAGGAGATGACGAATCTGATGATTGTGACGAATCCGAGGACGACGAGGAGGAGGAGAGCACTCACGGGGTCAAATGGAAGCCGCCACCACACTACACCGGCGGCAAGTGGCGCCCGGCATCGCCCGACAACGAGGACTGGGACCTCAGAGAGGAGCATTCCGGAGGCAAATGGAAGCCTTTGACTGTCGCAGAGAGCAACGAGCGCGATGACGACTTCGACGCGCCACCACCCGGCTATACCAAGGGCAAGTGGGTACCCGGGGCACCGGAGAAGATGCAGATCATGCAAACGACGATACAGAACAAGGGATCCGTTCAGTACTGGTGCGGCCCTTGCAACAGGCGCCTCGGGTCCAGAACTATATACGAGAAACATCTAATGTCCAACTTGCACATAAGAAAGGTGCTACCGGAACACGAATTAGAATTTTCCGGTCACATAGAACCCATTAAAAACGTTGCCGAAAAACGCGCCACTCGGCCATCGCGGTTCGTAAACGATAGCATCTACCTACAGCCGCAACGTTCTCAAAGAAAGAAGCAAAAGTTAATATTGAGCCCGAAAACAGAGAGAGTGAAAAGAAAGCGGAAGCCTTACTTTGTGCAATGCTCAGTATGCAAGTCTAGAGTCAGATACCAATTAATGGGAAAGCATTTGATATCTCATTACCACTTCAGGAAAGCGACTGATACCAAGAGTCCCACTTATCAACAGCTCATTCTCGACAACATAGACGTTATAGTGCACCAATCTCCATTTCAGTGCAGCCCGTGCAAATTTTACACCAACTGGCTGTCAAATTTTATGCAACACTGGTTTTCAGAGGAACACAAGTCGAACAGCGAGCCGATGGAAGGGCGATACTGGTGTTCCTTTTGCAAGTTCGAATGCGACACTTCTGACACGATGGCTAGCCACATATCCGGACCGGAGCATAGCGAGGTGGTGGCAGTCGTCAACAGGTCGATGCCTATAATACTGCGCAAGAAGACGATCTTTACCTGCCCCACGTGTTCAAAGGAGTTTAGGTATAACGTAGAAATGAGGCAGCACAGCCGGACGACCGGGCACGAGCTATCATACGCGGCCACCGACACCTACCAGGAGTTGCACAAGTGCGACCTCTGTAAGgacaaatttaaatcatcTCTCACTCTAGCGGCTCATTTGAAATCGAAGCACAAGCAGAGAGCGTACTTTTGTCTCGTGTGCTCCGTAACATTCAAGTCTTCAATTGAAGCCAAACAACATCGACAAACTTCCGAGCACAGAGTCCGGAGGAAGGAGATTCAGAAAGAGAAGGGATTGCCAGTCAAGGACTTAAGCAAGAAGTGCCCTTACTGTGCGGATGATGTGCGCCTCAGGAACGTTATCGAGCTGAAACAGCACATAAGAAACATCCACCCGGACAAGAAGAAAAAGTGTTCGAGATGTGGGATGTCGTTCACCTTGTTCCAAGAAGTGACTCGGCACATCAGATCTAAAGCCTGTGTGTACCAGACTGGCGGCCACTCGACCGCTTCCGTAGTGTGGAACTGCAGTCAGTGCGCATTCACCACTGACTCTCAGGCCGAGTGCTTCTTCCACGAGGTCTTACACTCGCCTTCTATAACGAAGGTCGTTAAAGGAGACGGAGATAAAGTTGTAGACAAATACGATTGCCCGCTTTGCCCCAAAACCTTCAGCAAGTCATCTCTTCGCGATCATTTGAAGCGGCATACTTTTGAGAGACCATTCGCTTGCGACGTATGCGGGGCCAACTTCACGCGGCAGAGCAGTCTCACCAACCACTGGAAACACGAGCACGGCAGTAAGACCACCTCGAAGGTGCCAGAGATTGTTGACAATGCAAGCCCCACAGTAAAAATCAATCAGTCTAAGAAGATAATTACAGATAAaatgGAGAATGCCAGCGCCGCGGCCACGACCGCGTGTGAGAGGCGCTGCCCGCACGAGCAGTGCGGCTACGTGGCCACCACAACATCACAGCTTATAcgTCATCGTCGATCCCATGGCGAGATCATCAAGACGCACTCGTGCGCGCTGTGCCCGTTCAGCAGCGACCAGGCCAGCCACATGCGGCGCCACGCGCGCTGCCACGCCGGCCACAAGCCCTACGCCTGCCCACACTGCGACTTCCTCTGCGCCAGCCTGGAAAACCTTCGCAAGCACGTCCTCCGCAGCGGCCGCCACAAGGGACTGTATCTGTATGAATGTCCTCATTGCAAATACCAAACGAATATGGCGGCGGAGCTCCGAACGCATTATGTGTCCACACATACACAGAAGTATGATGTGAAAACTGCACTCGAAGCTGTCAAGAAACATTTGATGAAAACAACTTCGGGACACAAGGATagcgaaaaataa
Protein Sequence: MSPKTLKCAISRRETSNSFDSSKLMFFTSCPRLASPRQMLSPRDDDDDDNHLCIKCNATIVGLDNYVEHRKQRCGKNKSETKPILPINPLEPTYSLGADVFFQSLELQSSVKKTTLSRLTPPTPISKASIDVKTTLTVASTSRDLPRISPVESNLRGVDWIGGHSLRIGSNEDNQTKLINAVASISGNVKKDLPSTSYSLGAFNDFKGDDESDDCDESEDDEEEESTHGVKWKPPPHYTGGKWRPASPDNEDWDLREEHSGGKWKPLTVAESNERDDDFDAPPPGYTKGKWVPGAPEKMQIMQTTIQNKGSVQYWCGPCNRRLGSRTIYEKHLMSNLHIRKVLPEHELEFSGHIEPIKNVAEKRATRPSRFVNDSIYLQPQRSQRKKQKLILSPKTERVKRKRKPYFVQCSVCKSRVRYQLMGKHLISHYHFRKATDTKSPTYQQLILDNIDVIVHQSPFQCSPCKFYTNWLSNFMQHWFSEEHKSNSEPMEGRYWCSFCKFECDTSDTMASHISGPEHSEVVAVVNRSMPIILRKKTIFTCPTCSKEFRYNVEMRQHSRTTGHELSYAATDTYQELHKCDLCKDKFKSSLTLAAHLKSKHKQRAYFCLVCSVTFKSSIEAKQHRQTSEHRVRRKEIQKEKGLPVKDLSKKCPYCADDVRLRNVIELKQHIRNIHPDKKKKCSRCGMSFTLFQEVTRHIRSKACVYQTGGHSTASVVWNCSQCAFTTDSQAECFFHEVLHSPSITKVVKGDGDKVVDKYDCPLCPKTFSKSSLRDHLKRHTFERPFACDVCGANFTRQSSLTNHWKHEHGSKTTSKVPEIVDNASPTVKINQSKKIITDKMENASAAATTACERRCPHEQCGYVATTTSQLIRHRRSHGEIIKTHSCALCPFSSDQASHMRRHARCHAGHKPYACPHCDFLCASLENLRKHVLRSGRHKGLYLYECPHCKYQTNMAAELRTHYVSTHTQKYDVKTALEAVKKHLMKTTSGHKDSEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01139233; iTF_01141988; iTF_01143411; iTF_01140486; iTF_01141192; iTF_01142731; iTF_01149912; iTF_01145599; iTF_01149124;
90% Identity: iTF_01149912;
80% Identity: -