Basic Information

Gene Symbol
-
Assembly
GCA_001298355.1
Location
NW:550270-552841[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.97 9.5e+02 -0.4 0.0 22 33 227 238 223 242 0.86
2 6 6e-07 0.00059 19.5 0.1 1 45 258 304 258 305 0.93
3 6 1.6e-09 1.6e-06 27.7 0.5 2 45 312 359 311 360 0.94
4 6 2.2e-06 0.0021 17.8 0.0 1 43 364 406 364 408 0.98
5 6 2e-06 0.0019 17.9 0.0 3 45 416 460 414 461 0.89
6 6 5.5 5.4e+03 -2.8 0.0 23 34 739 750 735 753 0.74

Sequence Information

Coding Sequence
ATGAGTTTTAAAGACTTTAATTTTGAACACAGTGATGATGATGTTGAAGTATCAGATTTACAAGAGCTTAGTTCGGTTTTGGACTTTATTGGCCCACCAAGTACTGCATCAACGTCACAAATTACTTCTCCATATATCAACGCCGACACTGCTGAACcagattatacaaaaatagacGAAGCATTATCACTGAACAGGTTAGCCGACGAAAAGTTACATGGACTGGAAAAAATCCTTATGTTACGATTAAACGAATgcaatcataaattaaaaagtattgaatctaaatataagagaaataagttttttgacaaaaatgaATCATTTAGATATGTAAGCTGTGGAAAaccatattttaaagataaatctaattttacaCCTCCTCACAATAAAGACACTATTACTATGTTGAATAACGGAATGTATAACTTCTCAACAATAAGTCCGGTCCCTGGCTGGACTGTCAGAGACAAGAGTCAATTTCTTACTATGATTCATAGGGTCTCCCTGGATATCCTCAGGAAAAAAGTTGAGACAAAGATAACAGAGTTAAATCGTGAAAAGAAGATACaacctaatattaaaattgatagaaAAATAGAAGCCTTAAAACATGAAATTGTTCTTATTAACAAAATGACATTGAAGCAATCAGCATTACCAATAAATGAGGATTATGATTGGGACTGTATAGCTAATAAGCTAAATAATCGCCATTCTGCACACGAATATGAAGCTCTatggaaattgtttttacatcccaatattaataaaagtgctTGGTCTAAAAATGAGCATACATCATTACAGAAAATTGCTTTCAGTAATAACTTTCAAAATTGGGAAGATATTGCTACAAGACTGGGCACAAAACGTACTGGCTAtcagtgttttgtttatttccgTACAAACATGAACAACACATTCACTGGTCAAAAATGGACAAAAGAAGAAGAGGAGTATTTGAAGAGATTAATAGATTATTATAGAGAAGATAAGTACATTCCTTGGGGTAAAGTGGCAACATCAATGGAAAATAGAACTAAAATACAGGTttacaacaaatataataGACTAATCGAGCAAAGGAAAGGAAGATTTTTACCTGAAGAGGACACAGTGATTCTCACATGTGCAGACCAATTTGGACTTGACTTCAAAAGAATGACAAATTACTTACCTGGCCGGTCATTAGGACAATTGCGTATCCGGTATCAAATCTTAGCCAAGCAAAGAATTTCAACAGTGTGGACAGTAGAGGAGGATAATAAACTTATTCAATTACtagcaaacaaaaaaacaccTACGGTATATTCTGATCTGACTAAATATTTCCCTGGTAAAGATAGAATGCACATAAGAAGTAGACATATGACACTATTAAAATGGATGAAACTAAATCCTAATAGTGATGTTTCAAGAGCACCCAGACGAGCAGCACGACGATTAGGTCATGGACAACCTTCCGATAACAATTTACACAAGGCAATTGAAAATCTAAAGAACCGAATTAAATCTGAAGTGGAAGAACgcaaatgcaaaaaaataacaatcaattCACCAGAAAATGTTATTGAAGATGGTATTATGGCAACATTAGTTAATCAAATCACAAAAGTTGAAGAAGTTAAAAAACTACAACAAACACAAAATGAAGTATTGGAATTCTTAGAAGATGTTAGTATTTCACctcaaaatttaaatgcaacaAACATAAAGAAgttgcttattttatttaaatctaagtTGGACAAAAGCAAGCTGGCAAATAGTGAGTATGTTAAGAGTTTTCCTGACTTAATTGAAGGCGAGCAAGAAGTGTGTCTAGTGAAAAAGAAATCATATTCAAAAAAAGACCGTGAAAAATTGGTTGTAAATAACATTCCAGATATATTTGGGACAAACACATTAGACACTTTAGAATATGTTTTGCCACCTCATTATGCAACTATTACTGGCTGTAGACAATTAATGGCATGGGtatcagaaaataaaaagaataaagcgtgcgatattaatttaaatgtactaataagaaaaaatgctttattaaaGGAACATTTCTTTCACTTACTGGAAAGATTTAATTCACTGTTTTTATGGCCTATGCTACTTTCAAATGAATCCCCTCATTTGAACCAGGTAGatgagaatatttttaatttgagcaAGCCAATGCATAGTATCTGTGACTCTACAGACAAAAATGATATACCTAATTCTATTGCGGATAAGCTGCCAATCTTGACTCATAATCATACTGAAGACACAGAACAAAATcacaaagataaattaaaatcctcGGATAACACTTGTACTGAAAAATCGATTTGA
Protein Sequence
MSFKDFNFEHSDDDVEVSDLQELSSVLDFIGPPSTASTSQITSPYINADTAEPDYTKIDEALSLNRLADEKLHGLEKILMLRLNECNHKLKSIESKYKRNKFFDKNESFRYVSCGKPYFKDKSNFTPPHNKDTITMLNNGMYNFSTISPVPGWTVRDKSQFLTMIHRVSLDILRKKVETKITELNREKKIQPNIKIDRKIEALKHEIVLINKMTLKQSALPINEDYDWDCIANKLNNRHSAHEYEALWKLFLHPNINKSAWSKNEHTSLQKIAFSNNFQNWEDIATRLGTKRTGYQCFVYFRTNMNNTFTGQKWTKEEEEYLKRLIDYYREDKYIPWGKVATSMENRTKIQVYNKYNRLIEQRKGRFLPEEDTVILTCADQFGLDFKRMTNYLPGRSLGQLRIRYQILAKQRISTVWTVEEDNKLIQLLANKKTPTVYSDLTKYFPGKDRMHIRSRHMTLLKWMKLNPNSDVSRAPRRAARRLGHGQPSDNNLHKAIENLKNRIKSEVEERKCKKITINSPENVIEDGIMATLVNQITKVEEVKKLQQTQNEVLEFLEDVSISPQNLNATNIKKLLILFKSKLDKSKLANSEYVKSFPDLIEGEQEVCLVKKKSYSKKDREKLVVNNIPDIFGTNTLDTLEYVLPPHYATITGCRQLMAWVSENKKNKACDINLNVLIRKNALLKEHFFHLLERFNSLFLWPMLLSNESPHLNQVDENIFNLSKPMHSICDSTDKNDIPNSIADKLPILTHNHTEDTEQNHKDKLKSSDNTCTEKSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
-