Basic Information

Gene Symbol
Xbp1
Assembly
GCA_001298355.1
Location
NW:3005321-3008447[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.7e-18 1.2e-15 56.9 9.2 2 65 46 109 46 109 0.96
2 2 0.0005 0.34 10.5 1.0 33 55 91 113 91 117 0.91

Sequence Information

Coding Sequence
ATGAGCGCCCCAATTATCATCACTGTTCCCAACAACTACCTAGCGATGGAGGACATGGACTCCCAGGTGATGGTCGACGTAACGTCACCATCACCATCACCATCGCGAAAAAGAAGGTTGGACCATCTCACATGGGAGGAGAAAATGCAGCGCAAgAAATTGAAAAATCGTGTCGCAGCGCAGACTTCACGCGACAGGAAAAAGGCTAAAATGGATGAAATGGAAAGTCGTATCAAACATTTTATGGATGTCAATGAAAAGCTTATTAGTGAAGTGGAGAGTTTGAAGGCATTGAACGAGCGTCTGTTAAGTGAGAACACTAAGCTACGCAGTGAGGCGGCGGCTCGCACCGTCGCGGGAGCCCCGGGACCAGCAGCGTCTCAGCCTCAGCAGAAGGTGGGGCTCCCGTCGGCGATGCGTGTGGCACGCCTACTGCTGGCGATGTGCCTCTTGCAGACATCCTCGCACAGTTCGAGTCTGAAGAGTACCTCGACACCCTTCAGCAGCTTGCAAACTCCCTCCTCCAAGAAATTGATACAAACACTGCAGGAGCGACTCAAGATGTATCAATCAGGGAAGCTGGAGAATGCATTGCAGGAGCTCAAGTGGTGGGGACCTCAGCAAAGCAACTGGAATCCGGTGAAGGTGGATGCGTAG
Protein Sequence
MSAPIIITVPNNYLAMEDMDSQVMVDVTSPSPSPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMESRIKHFMDVNEKLISEVESLKALNERLLSENTKLRSEAAARTVAGAPGPAASQPQQKVGLPSAMRVARLLLAMCLLQTSSHSSSLKSTSTPFSSLQTPSSKKLIQTLQERLKMYQSGKLENALQELKWWGPQQSNWNPVKVDA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01491609;
90% Identity
iTF_01142156;
80% Identity
-